EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011072 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1077 bases
Position: chrreftig_9:3208985-3210061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018845	Ribosomal_L17	PF01196.19	4.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019051	-	855	-	ENSCSAVP00000018845	161 (aa)	-	H2ZMM9

Gene Model

Click here to download ENSCSAVG00000011072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011072	-	96	36.306	ENSG00000158042	MRPL17	92	32.278	Homo_sapiens
ENSCSAVG00000011072	-	94	39.610	ENSAPOG00000014937	mrpl17	92	39.610	Acanthochromis_polyacanthus
ENSCSAVG00000011072	-	81	39.695	ENSAMEG00000016246	MRPL17	87	37.908	Ailuropoda_melanoleuca
ENSCSAVG00000011072	-	94	39.610	ENSACIG00000011247	mrpl17	92	39.610	Amphilophus_citrinellus
ENSCSAVG00000011072	-	52	36.145	ENSACIG00000010456	-	59	36.145	Amphilophus_citrinellus
ENSCSAVG00000011072	-	94	39.610	ENSAOCG00000009243	mrpl17	92	39.610	Amphiprion_ocellaris
ENSCSAVG00000011072	-	94	39.610	ENSAPEG00000009301	mrpl17	92	39.610	Amphiprion_percula
ENSCSAVG00000011072	-	93	43.046	ENSATEG00000018777	mrpl17	90	43.046	Anabas_testudineus
ENSCSAVG00000011072	-	89	40.000	ENSACAG00000009480	MRPL17	82	43.448	Anolis_carolinensis
ENSCSAVG00000011072	-	95	37.419	ENSANAG00000019957	MRPL17	86	37.419	Aotus_nancymaae
ENSCSAVG00000011072	-	94	38.312	ENSACLG00000027400	mrpl17	92	38.312	Astatotilapia_calliptera
ENSCSAVG00000011072	-	94	40.260	ENSAMXG00000015294	mrpl17	87	40.260	Astyanax_mexicanus
ENSCSAVG00000011072	-	93	36.842	ENSBTAG00000024781	MRPL17	87	36.842	Bos_taurus
ENSCSAVG00000011072	-	93	30.723	WBGene00021829	mrpl-17	86	30.723	Caenorhabditis_elegans
ENSCSAVG00000011072	-	95	36.774	ENSCJAG00000038483	MRPL17	86	36.774	Callithrix_jacchus
ENSCSAVG00000011072	-	81	39.695	ENSCAFG00000006589	MRPL17	72	37.908	Canis_familiaris
ENSCSAVG00000011072	-	81	39.695	ENSCAFG00020009746	MRPL17	87	37.908	Canis_lupus_dingo
ENSCSAVG00000011072	-	81	37.879	ENSCHIG00000015842	MRPL17	87	36.184	Capra_hircus
ENSCSAVG00000011072	-	81	39.394	ENSTSYG00000027878	MRPL17	86	37.419	Carlito_syrichta
ENSCSAVG00000011072	-	95	38.065	ENSCPOG00000032658	MRPL17	86	38.065	Cavia_porcellus
ENSCSAVG00000011072	-	95	38.065	ENSCCAG00000025049	MRPL17	86	38.065	Cebus_capucinus
ENSCSAVG00000011072	-	96	37.580	ENSCATG00000035650	MRPL17	87	37.580	Cercocebus_atys
ENSCSAVG00000011072	-	83	40.299	ENSCLAG00000015854	MRPL17	86	38.065	Chinchilla_lanigera
ENSCSAVG00000011072	-	96	37.580	ENSCSAG00000004367	MRPL17	83	37.580	Chlorocebus_sabaeus
ENSCSAVG00000011072	-	89	42.466	ENSCPBG00000000499	MRPL17	80	42.466	Chrysemys_picta_bellii
ENSCSAVG00000011072	-	99	86.792	ENSCING00000004204	-	96	86.792	Ciona_intestinalis
ENSCSAVG00000011072	-	85	38.406	ENSCANG00000042315	MRPL17	87	37.580	Colobus_angolensis_palliatus
ENSCSAVG00000011072	-	81	40.152	ENSCGRG00000004658	Mrpl17	86	37.662	Cricetulus_griseus_crigri
ENSCSAVG00000011072	-	93	39.073	ENSCSEG00000015170	mrpl17	88	39.073	Cynoglossus_semilaevis
ENSCSAVG00000011072	-	93	39.735	ENSCVAG00000015116	mrpl17	90	39.735	Cyprinodon_variegatus
ENSCSAVG00000011072	-	94	38.961	ENSDARG00000075677	mrpl17	91	38.961	Danio_rerio
ENSCSAVG00000011072	-	95	36.774	ENSDNOG00000047312	-	61	36.774	Dasypus_novemcinctus
ENSCSAVG00000011072	-	81	40.152	ENSDORG00000026555	Mrpl17	86	38.065	Dipodomys_ordii
ENSCSAVG00000011072	-	84	38.686	ENSETEG00000008580	MRPL17	86	37.419	Echinops_telfairi
ENSCSAVG00000011072	-	96	36.646	ENSEBUG00000013244	mrpl17	80	36.242	Eptatretus_burgeri
ENSCSAVG00000011072	-	81	38.636	ENSEASG00005003093	MRPL17	88	37.013	Equus_asinus_asinus
ENSCSAVG00000011072	-	81	38.636	ENSECAG00000010156	MRPL17	88	37.013	Equus_caballus
ENSCSAVG00000011072	-	89	38.356	ENSEEUG00000013026	MRPL17	84	38.356	Erinaceus_europaeus
ENSCSAVG00000011072	-	94	42.208	ENSELUG00000020191	mrpl17	93	42.208	Esox_lucius
ENSCSAVG00000011072	-	81	39.394	ENSFCAG00000036047	MRPL17	75	37.662	Felis_catus
ENSCSAVG00000011072	-	81	39.394	ENSFDAG00000013150	MRPL17	86	36.774	Fukomys_damarensis
ENSCSAVG00000011072	-	93	40.397	ENSFHEG00000006763	mrpl17	90	40.397	Fundulus_heteroclitus
ENSCSAVG00000011072	-	93	42.384	ENSGMOG00000013596	mrpl17	84	42.384	Gadus_morhua
ENSCSAVG00000011072	-	95	42.581	ENSGALG00000002605	MRPL17	93	42.581	Gallus_gallus
ENSCSAVG00000011072	-	96	39.744	ENSGAFG00000010332	mrpl17	92	39.744	Gambusia_affinis
ENSCSAVG00000011072	-	97	38.608	ENSGACG00000003236	mrpl17	92	38.608	Gasterosteus_aculeatus
ENSCSAVG00000011072	-	52	38.824	ENSGAGG00000000396	MRPL17	77	38.824	Gopherus_agassizii
ENSCSAVG00000011072	-	96	36.943	ENSGGOG00000038003	MRPL17	87	36.943	Gorilla_gorilla
ENSCSAVG00000011072	-	94	39.610	ENSHBUG00000017678	mrpl17	92	39.610	Haplochromis_burtoni
ENSCSAVG00000011072	-	95	36.129	ENSHGLG00000006859	MRPL17	86	36.129	Heterocephalus_glaber_female
ENSCSAVG00000011072	-	95	36.129	ENSHGLG00100013588	MRPL17	86	36.129	Heterocephalus_glaber_male
ENSCSAVG00000011072	-	93	43.046	ENSHCOG00000011399	mrpl17	90	43.046	Hippocampus_comes
ENSCSAVG00000011072	-	94	37.013	ENSIPUG00000018383	MRPL17	89	37.013	Ictalurus_punctatus
ENSCSAVG00000011072	-	81	39.394	ENSJJAG00000022535	Mrpl17	86	37.419	Jaculus_jaculus
ENSCSAVG00000011072	-	93	41.060	ENSKMAG00000011240	mrpl17	89	41.060	Kryptolebias_marmoratus
ENSCSAVG00000011072	-	94	41.558	ENSLBEG00000003781	mrpl17	92	41.558	Labrus_bergylta
ENSCSAVG00000011072	-	95	38.065	ENSLACG00000015317	MRPL17	84	38.065	Latimeria_chalumnae
ENSCSAVG00000011072	-	94	40.260	ENSLOCG00000004435	mrpl17	91	40.260	Lepisosteus_oculatus
ENSCSAVG00000011072	-	81	39.394	ENSLAFG00000004834	MRPL17	86	37.419	Loxodonta_africana
ENSCSAVG00000011072	-	96	37.580	ENSMFAG00000005488	MRPL17	87	37.580	Macaca_fascicularis
ENSCSAVG00000011072	-	96	37.580	ENSMMUG00000004544	MRPL17	87	37.580	Macaca_mulatta
ENSCSAVG00000011072	-	96	37.580	ENSMNEG00000031071	MRPL17	87	37.580	Macaca_nemestrina
ENSCSAVG00000011072	-	96	37.580	ENSMLEG00000040344	MRPL17	87	37.580	Mandrillus_leucophaeus
ENSCSAVG00000011072	-	93	40.397	ENSMAMG00000005242	mrpl17	87	40.397	Mastacembelus_armatus
ENSCSAVG00000011072	-	94	39.610	ENSMZEG00005003468	mrpl17	92	39.610	Maylandia_zebra
ENSCSAVG00000011072	-	81	39.394	ENSMAUG00000005494	Mrpl17	86	37.013	Mesocricetus_auratus
ENSCSAVG00000011072	-	81	38.636	ENSMICG00000035814	MRPL17	87	36.774	Microcebus_murinus
ENSCSAVG00000011072	-	83	39.552	ENSMOCG00000018077	Mrpl17	86	38.312	Microtus_ochrogaster
ENSCSAVG00000011072	-	94	40.260	ENSMMOG00000015377	mrpl17	92	40.260	Mola_mola
ENSCSAVG00000011072	-	95	38.710	ENSMODG00000018267	MRPL17	96	38.710	Monodelphis_domestica
ENSCSAVG00000011072	-	94	42.857	ENSMALG00000013904	mrpl17	92	42.857	Monopterus_albus
ENSCSAVG00000011072	-	81	40.909	MGP_CAROLIEiJ_G0030241	Mrpl17	85	38.816	Mus_caroli
ENSCSAVG00000011072	-	81	40.909	ENSMUSG00000030879	Mrpl17	85	38.816	Mus_musculus
ENSCSAVG00000011072	-	81	40.909	MGP_PahariEiJ_G0013456	Mrpl17	85	38.816	Mus_pahari
ENSCSAVG00000011072	-	81	40.909	MGP_SPRETEiJ_G0031353	Mrpl17	85	38.816	Mus_spretus
ENSCSAVG00000011072	-	81	38.931	ENSMPUG00000018502	-	87	37.255	Mustela_putorius_furo
ENSCSAVG00000011072	-	81	39.695	ENSMPUG00000005449	-	70	37.908	Mustela_putorius_furo
ENSCSAVG00000011072	-	93	36.424	ENSMLUG00000001144	MRPL17	86	36.424	Myotis_lucifugus
ENSCSAVG00000011072	-	81	39.394	ENSNGAG00000012128	Mrpl17	85	37.500	Nannospalax_galili
ENSCSAVG00000011072	-	94	39.610	ENSNBRG00000015689	mrpl17	92	39.610	Neolamprologus_brichardi
ENSCSAVG00000011072	-	96	36.943	ENSNLEG00000032707	MRPL17	87	36.943	Nomascus_leucogenys
ENSCSAVG00000011072	-	95	37.419	ENSMEUG00000013588	-	96	37.419	Notamacropus_eugenii
ENSCSAVG00000011072	-	81	40.458	ENSOPRG00000008141	MRPL17	88	36.709	Ochotona_princeps
ENSCSAVG00000011072	-	95	37.419	ENSODEG00000009556	MRPL17	87	37.419	Octodon_degus
ENSCSAVG00000011072	-	94	39.610	ENSONIG00000011427	mrpl17	92	39.610	Oreochromis_niloticus
ENSCSAVG00000011072	-	73	30.508	ENSOANG00000007173	-	89	30.508	Ornithorhynchus_anatinus
ENSCSAVG00000011072	-	77	38.400	ENSOCUG00000005726	MRPL17	86	37.662	Oryctolagus_cuniculus
ENSCSAVG00000011072	-	94	40.909	ENSORLG00000028920	mrpl17	92	40.909	Oryzias_latipes
ENSCSAVG00000011072	-	94	40.909	ENSORLG00020000015	mrpl17	92	40.909	Oryzias_latipes_hni
ENSCSAVG00000011072	-	94	40.909	ENSORLG00015005891	mrpl17	92	40.909	Oryzias_latipes_hsok
ENSCSAVG00000011072	-	92	38.000	ENSOMEG00000019409	mrpl17	89	38.000	Oryzias_melastigma
ENSCSAVG00000011072	-	81	39.394	ENSOGAG00000014856	MRPL17	86	37.419	Otolemur_garnettii
ENSCSAVG00000011072	-	81	37.879	ENSOARG00000016577	MRPL17	87	36.184	Ovis_aries
ENSCSAVG00000011072	-	96	36.306	ENSPPAG00000038749	MRPL17	87	36.306	Pan_paniscus
ENSCSAVG00000011072	-	81	39.394	ENSPPRG00000022075	MRPL17	88	37.662	Panthera_pardus
ENSCSAVG00000011072	-	81	39.394	ENSPTIG00000014738	MRPL17	75	37.662	Panthera_tigris_altaica
ENSCSAVG00000011072	-	96	36.306	ENSPTRG00000044450	MRPL17	87	36.306	Pan_troglodytes
ENSCSAVG00000011072	-	96	36.943	ENSPANG00000025791	MRPL17	87	36.943	Papio_anubis
ENSCSAVG00000011072	-	94	42.208	ENSPKIG00000021330	mrpl17	91	42.208	Paramormyrops_kingsleyae
ENSCSAVG00000011072	-	94	40.260	ENSPMGG00000018670	mrpl17	92	40.260	Periophthalmus_magnuspinnatus
ENSCSAVG00000011072	-	81	39.394	ENSPEMG00000012735	Mrpl17	85	38.158	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011072	-	95	37.419	ENSPCIG00000010796	MRPL17	92	37.419	Phascolarctos_cinereus
ENSCSAVG00000011072	-	93	41.060	ENSPFOG00000003148	mrpl17	89	41.060	Poecilia_formosa
ENSCSAVG00000011072	-	93	41.060	ENSPLAG00000007818	mrpl17	89	41.060	Poecilia_latipinna
ENSCSAVG00000011072	-	93	41.060	ENSPMEG00000011833	mrpl17	89	41.060	Poecilia_mexicana
ENSCSAVG00000011072	-	93	41.060	ENSPREG00000014661	mrpl17	89	41.060	Poecilia_reticulata
ENSCSAVG00000011072	-	96	36.943	ENSPPYG00000003534	MRPL17	87	36.943	Pongo_abelii
ENSCSAVG00000011072	-	81	39.394	ENSPCAG00000018837	-	86	37.419	Procavia_capensis
ENSCSAVG00000011072	-	81	39.394	ENSPCAG00000018799	-	86	37.419	Procavia_capensis
ENSCSAVG00000011072	-	81	39.394	ENSPCOG00000014817	-	86	37.419	Propithecus_coquereli
ENSCSAVG00000011072	-	54	35.632	ENSPCOG00000011215	-	73	33.636	Propithecus_coquereli
ENSCSAVG00000011072	-	81	37.879	ENSPVAG00000006422	MRPL17	87	36.184	Pteropus_vampyrus
ENSCSAVG00000011072	-	94	39.610	ENSPNYG00000015200	mrpl17	92	39.610	Pundamilia_nyererei
ENSCSAVG00000011072	-	94	38.312	ENSPNAG00000026698	mrpl17	91	38.312	Pygocentrus_nattereri
ENSCSAVG00000011072	-	81	40.152	ENSRNOG00000019497	Mrpl17	85	38.158	Rattus_norvegicus
ENSCSAVG00000011072	-	85	38.406	ENSRBIG00000040233	MRPL17	93	36.709	Rhinopithecus_bieti
ENSCSAVG00000011072	-	85	38.406	ENSRROG00000032283	MRPL17	90	36.943	Rhinopithecus_roxellana
ENSCSAVG00000011072	-	95	37.419	ENSSBOG00000031626	MRPL17	86	37.419	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011072	-	86	37.857	ENSSHAG00000010208	MRPL17	92	36.774	Sarcophilus_harrisii
ENSCSAVG00000011072	-	97	41.772	ENSSFOG00015021634	mrpl17	93	41.772	Scleropages_formosus
ENSCSAVG00000011072	-	94	41.558	ENSSMAG00000006719	mrpl17	92	41.558	Scophthalmus_maximus
ENSCSAVG00000011072	-	94	41.558	ENSSDUG00000001234	mrpl17	92	41.558	Seriola_dumerili
ENSCSAVG00000011072	-	94	41.558	ENSSLDG00000000596	mrpl17	92	41.558	Seriola_lalandi_dorsalis
ENSCSAVG00000011072	-	93	41.722	ENSSPUG00000015486	MRPL17	88	41.722	Sphenodon_punctatus
ENSCSAVG00000011072	-	94	38.312	ENSSPAG00000000386	mrpl17	92	38.312	Stegastes_partitus
ENSCSAVG00000011072	-	81	40.152	ENSSSCG00000024693	MRPL17	88	38.158	Sus_scrofa
ENSCSAVG00000011072	-	94	43.506	ENSTGUG00000001893	MRPL17	92	43.506	Taeniopygia_guttata
ENSCSAVG00000011072	-	95	33.158	ENSTRUG00000022925	mrpl17	95	33.158	Takifugu_rubripes
ENSCSAVG00000011072	-	93	40.000	ENSTNIG00000008195	mrpl17	93	40.000	Tetraodon_nigroviridis
ENSCSAVG00000011072	-	81	39.394	ENSTTRG00000004903	MRPL17	87	37.500	Tursiops_truncatus
ENSCSAVG00000011072	-	81	39.695	ENSUAMG00000025644	MRPL17	70	37.908	Ursus_americanus
ENSCSAVG00000011072	-	81	39.695	ENSUMAG00000000411	MRPL17	70	37.908	Ursus_maritimus
ENSCSAVG00000011072	-	81	40.152	ENSVPAG00000008874	MRPL17	85	39.726	Vicugna_pacos
ENSCSAVG00000011072	-	81	39.695	ENSVVUG00000024084	MRPL17	68	38.158	Vulpes_vulpes
ENSCSAVG00000011072	-	94	39.869	ENSXETG00000027295	mrpl17	88	39.869	Xenopus_tropicalis
ENSCSAVG00000011072	-	93	40.397	ENSXCOG00000019115	mrpl17	89	40.397	Xiphophorus_couchianus
ENSCSAVG00000011072	-	93	39.735	ENSXMAG00000006741	mrpl17	90	39.735	Xiphophorus_maculatus