EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011080 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2331 bases
Position: chrreftig_16:2905784-2908114
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018853	zf-U1	PF06220.12	3.5e-08	1	1
ENSCSAVP00000018853	zf-CCCH	PF00642.24	4.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019059	-	907	-	ENSCSAVP00000018853	167 (aa)	-	H2ZMN7

Gene Model

Click here to download ENSCSAVG00000011080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011080	-	90	38.608	ENSG00000100319	ZMAT5	78	39.552	Homo_sapiens
ENSCSAVG00000011080	-	74	42.537	ENSAPOG00000000944	zmat5	75	42.537	Acanthochromis_polyacanthus
ENSCSAVG00000011080	-	90	34.940	ENSAMEG00000008059	ZMAT5	51	44.565	Ailuropoda_melanoleuca
ENSCSAVG00000011080	-	73	43.846	ENSACIG00000015828	zmat5	74	43.846	Amphilophus_citrinellus
ENSCSAVG00000011080	-	74	42.188	ENSAOCG00000003009	zmat5	72	42.188	Amphiprion_ocellaris
ENSCSAVG00000011080	-	74	42.188	ENSAPEG00000011779	zmat5	72	42.188	Amphiprion_percula
ENSCSAVG00000011080	-	83	42.953	ENSATEG00000020071	zmat5	86	43.046	Anabas_testudineus
ENSCSAVG00000011080	-	53	41.121	ENSAPLG00000007232	ZMAT5	61	41.121	Anas_platyrhynchos
ENSCSAVG00000011080	-	51	51.163	ENSACAG00000000796	ZMAT5	73	47.368	Anolis_carolinensis
ENSCSAVG00000011080	-	90	39.241	ENSANAG00000032394	ZMAT5	78	40.299	Aotus_nancymaae
ENSCSAVG00000011080	-	75	40.157	ENSAMXG00000006979	zmat5	85	38.776	Astyanax_mexicanus
ENSCSAVG00000011080	-	91	38.217	ENSBTAG00000017890	ZMAT5	79	39.706	Bos_taurus
ENSCSAVG00000011080	-	90	37.821	ENSCJAG00000021763	ZMAT5	54	46.739	Callithrix_jacchus
ENSCSAVG00000011080	-	90	35.897	ENSCAFG00000012343	ZMAT5	54	44.565	Canis_familiaris
ENSCSAVG00000011080	-	90	35.897	ENSCAFG00020000699	ZMAT5	54	44.565	Canis_lupus_dingo
ENSCSAVG00000011080	-	90	34.810	ENSCHIG00000014766	ZMAT5	78	35.294	Capra_hircus
ENSCSAVG00000011080	-	90	37.821	ENSTSYG00000032219	ZMAT5	79	39.706	Carlito_syrichta
ENSCSAVG00000011080	-	90	35.948	ENSCAPG00000017916	ZMAT5	77	35.878	Cavia_aperea
ENSCSAVG00000011080	-	90	39.873	ENSCPOG00000035759	ZMAT5	79	41.176	Cavia_porcellus
ENSCSAVG00000011080	-	90	39.241	ENSCCAG00000027039	ZMAT5	78	40.299	Cebus_capucinus
ENSCSAVG00000011080	-	90	38.608	ENSCATG00000041346	ZMAT5	78	39.552	Cercocebus_atys
ENSCSAVG00000011080	-	90	39.241	ENSCLAG00000011728	ZMAT5	79	40.441	Chinchilla_lanigera
ENSCSAVG00000011080	-	90	38.608	ENSCSAG00000009611	ZMAT5	78	39.552	Chlorocebus_sabaeus
ENSCSAVG00000011080	-	90	38.365	ENSCPBG00000007737	ZMAT5	79	40.299	Chrysemys_picta_bellii
ENSCSAVG00000011080	-	90	56.579	ENSCING00000024695	-	100	55.882	Ciona_intestinalis
ENSCSAVG00000011080	-	90	38.608	ENSCANG00000027205	ZMAT5	78	39.552	Colobus_angolensis_palliatus
ENSCSAVG00000011080	-	90	38.608	ENSCGRG00001006990	Zmat5	78	39.552	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011080	-	90	38.608	ENSCGRG00000013989	Zmat5	78	39.552	Cricetulus_griseus_crigri
ENSCSAVG00000011080	-	89	37.107	ENSCSEG00000015698	zmat5	53	46.739	Cynoglossus_semilaevis
ENSCSAVG00000011080	-	83	41.892	ENSCVAG00000021521	zmat5	85	41.892	Cyprinodon_variegatus
ENSCSAVG00000011080	-	90	36.478	ENSDARG00000035434	zmat5	76	36.691	Danio_rerio
ENSCSAVG00000011080	-	90	38.608	ENSDNOG00000000899	ZMAT5	54	46.739	Dasypus_novemcinctus
ENSCSAVG00000011080	-	90	38.608	ENSDORG00000005655	Zmat5	79	39.706	Dipodomys_ordii
ENSCSAVG00000011080	-	53	32.955	FBgn0051922	CG31922	63	32.955	Drosophila_melanogaster
ENSCSAVG00000011080	-	90	37.975	ENSETEG00000003789	ZMAT5	54	44.565	Echinops_telfairi
ENSCSAVG00000011080	-	87	31.081	ENSEBUG00000015692	zmat5	58	35.294	Eptatretus_burgeri
ENSCSAVG00000011080	-	90	38.608	ENSEASG00005010189	ZMAT5	54	46.739	Equus_asinus_asinus
ENSCSAVG00000011080	-	90	38.608	ENSECAG00000017576	ZMAT5	54	46.739	Equus_caballus
ENSCSAVG00000011080	-	90	37.821	ENSEEUG00000000936	ZMAT5	78	39.552	Erinaceus_europaeus
ENSCSAVG00000011080	-	77	44.118	ENSELUG00000000943	zmat5	77	44.118	Esox_lucius
ENSCSAVG00000011080	-	90	35.897	ENSFCAG00000004251	ZMAT5	54	44.565	Felis_catus
ENSCSAVG00000011080	-	90	36.709	ENSFALG00000007011	ZMAT5	54	48.913	Ficedula_albicollis
ENSCSAVG00000011080	-	90	39.873	ENSFDAG00000019792	ZMAT5	79	41.176	Fukomys_damarensis
ENSCSAVG00000011080	-	84	42.000	ENSFHEG00000020879	zmat5	86	42.000	Fundulus_heteroclitus
ENSCSAVG00000011080	-	57	45.263	ENSGMOG00000012163	zmat5	54	45.263	Gadus_morhua
ENSCSAVG00000011080	-	89	38.961	ENSGALG00000008070	ZMAT5	94	40.496	Gallus_gallus
ENSCSAVG00000011080	-	84	38.411	ENSGAFG00000009069	zmat5	86	38.411	Gambusia_affinis
ENSCSAVG00000011080	-	74	40.310	ENSGACG00000016940	zmat5	79	39.850	Gasterosteus_aculeatus
ENSCSAVG00000011080	-	90	36.601	ENSGAGG00000012370	ZMAT5	55	47.826	Gopherus_agassizii
ENSCSAVG00000011080	-	90	38.608	ENSGGOG00000003792	ZMAT5	78	39.552	Gorilla_gorilla
ENSCSAVG00000011080	-	100	40.113	ENSHBUG00000019402	zmat5	74	43.846	Haplochromis_burtoni
ENSCSAVG00000011080	-	90	39.873	ENSHGLG00000018180	ZMAT5	79	41.176	Heterocephalus_glaber_female
ENSCSAVG00000011080	-	90	39.241	ENSHGLG00100014927	ZMAT5	78	40.441	Heterocephalus_glaber_male
ENSCSAVG00000011080	-	93	35.032	ENSHCOG00000001727	zmat5	85	34.899	Hippocampus_comes
ENSCSAVG00000011080	-	55	44.565	ENSIPUG00000006633	zmat5	53	44.565	Ictalurus_punctatus
ENSCSAVG00000011080	-	90	38.608	ENSSTOG00000005457	ZMAT5	79	39.706	Ictidomys_tridecemlineatus
ENSCSAVG00000011080	-	90	37.419	ENSKMAG00000007209	zmat5	84	42.568	Kryptolebias_marmoratus
ENSCSAVG00000011080	-	84	34.028	ENSLBEG00000017297	zmat5	85	34.028	Labrus_bergylta
ENSCSAVG00000011080	-	81	40.278	ENSLACG00000001597	ZMAT5	100	40.113	Latimeria_chalumnae
ENSCSAVG00000011080	-	90	37.500	ENSLOCG00000003675	zmat5	58	46.535	Lepisosteus_oculatus
ENSCSAVG00000011080	-	90	38.608	ENSLAFG00000010823	ZMAT5	54	45.652	Loxodonta_africana
ENSCSAVG00000011080	-	90	38.608	ENSMFAG00000040309	ZMAT5	78	39.552	Macaca_fascicularis
ENSCSAVG00000011080	-	90	38.608	ENSMMUG00000040034	ZMAT5	78	39.552	Macaca_mulatta
ENSCSAVG00000011080	-	90	38.608	ENSMNEG00000033419	ZMAT5	78	39.552	Macaca_nemestrina
ENSCSAVG00000011080	-	90	38.608	ENSMLEG00000043289	ZMAT5	78	39.552	Mandrillus_leucophaeus
ENSCSAVG00000011080	-	83	39.726	ENSMAMG00000011505	zmat5	84	40.411	Mastacembelus_armatus
ENSCSAVG00000011080	-	77	44.118	ENSMZEG00005018406	zmat5	74	43.846	Maylandia_zebra
ENSCSAVG00000011080	-	55	50.000	ENSMGAG00000009818	ZMAT5	71	50.000	Meleagris_gallopavo
ENSCSAVG00000011080	-	90	38.608	ENSMAUG00000021576	Zmat5	54	46.739	Mesocricetus_auratus
ENSCSAVG00000011080	-	55	46.739	ENSMICG00000027135	ZMAT5	54	46.739	Microcebus_murinus
ENSCSAVG00000011080	-	90	38.608	ENSMOCG00000014203	Zmat5	54	46.739	Microtus_ochrogaster
ENSCSAVG00000011080	-	77	41.045	ENSMMOG00000009336	zmat5	76	41.045	Mola_mola
ENSCSAVG00000011080	-	89	35.099	ENSMODG00000009007	ZMAT5	76	37.008	Monodelphis_domestica
ENSCSAVG00000011080	-	51	48.235	ENSMALG00000011581	zmat5	67	40.517	Monopterus_albus
ENSCSAVG00000011080	-	90	39.241	ENSMUSG00000009076	Zmat5	54	47.826	Mus_musculus
ENSCSAVG00000011080	-	91	36.129	ENSMPUG00000013253	ZMAT5	53	44.565	Mustela_putorius_furo
ENSCSAVG00000011080	-	90	36.076	ENSMLUG00000017398	ZMAT5	54	43.478	Myotis_lucifugus
ENSCSAVG00000011080	-	90	38.608	ENSNGAG00000019083	Zmat5	79	39.706	Nannospalax_galili
ENSCSAVG00000011080	-	90	38.608	ENSNLEG00000003391	ZMAT5	78	39.552	Nomascus_leucogenys
ENSCSAVG00000011080	-	90	38.608	ENSODEG00000017389	ZMAT5	54	47.826	Octodon_degus
ENSCSAVG00000011080	-	68	45.000	ENSONIG00000013964	zmat5	72	39.844	Oreochromis_niloticus
ENSCSAVG00000011080	-	90	38.608	ENSOCUG00000005282	ZMAT5	79	39.552	Oryctolagus_cuniculus
ENSCSAVG00000011080	-	74	40.299	ENSORLG00000008131	zmat5	53	47.826	Oryzias_latipes
ENSCSAVG00000011080	-	74	39.844	ENSORLG00020017564	zmat5	53	47.826	Oryzias_latipes_hni
ENSCSAVG00000011080	-	74	40.299	ENSORLG00015004714	zmat5	53	47.826	Oryzias_latipes_hsok
ENSCSAVG00000011080	-	74	42.857	ENSOMEG00000002536	zmat5	75	42.857	Oryzias_melastigma
ENSCSAVG00000011080	-	90	37.342	ENSOGAG00000016378	ZMAT5	54	46.739	Otolemur_garnettii
ENSCSAVG00000011080	-	90	36.478	ENSOARG00000005488	ZMAT5	53	46.739	Ovis_aries
ENSCSAVG00000011080	-	90	38.608	ENSPPAG00000029148	ZMAT5	78	39.552	Pan_paniscus
ENSCSAVG00000011080	-	90	35.897	ENSPPRG00000016453	ZMAT5	54	44.565	Panthera_pardus
ENSCSAVG00000011080	-	90	35.897	ENSPTIG00000021188	ZMAT5	54	44.565	Panthera_tigris_altaica
ENSCSAVG00000011080	-	90	38.608	ENSPTRG00000014229	ZMAT5	78	39.552	Pan_troglodytes
ENSCSAVG00000011080	-	90	38.608	ENSPANG00000020624	ZMAT5	78	39.552	Papio_anubis
ENSCSAVG00000011080	-	81	38.889	ENSPKIG00000023667	zmat5	86	39.597	Paramormyrops_kingsleyae
ENSCSAVG00000011080	-	83	41.096	ENSPMGG00000016190	zmat5	84	41.096	Periophthalmus_magnuspinnatus
ENSCSAVG00000011080	-	90	38.608	ENSPEMG00000007232	Zmat5	54	46.739	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011080	-	89	36.601	ENSPCIG00000026919	ZMAT5	74	40.323	Phascolarctos_cinereus
ENSCSAVG00000011080	-	84	40.667	ENSPFOG00000019788	zmat5	86	40.667	Poecilia_formosa
ENSCSAVG00000011080	-	74	43.182	ENSPLAG00000022833	zmat5	77	42.537	Poecilia_latipinna
ENSCSAVG00000011080	-	74	43.182	ENSPMEG00000008885	zmat5	77	42.537	Poecilia_mexicana
ENSCSAVG00000011080	-	84	41.333	ENSPREG00000012981	zmat5	86	41.333	Poecilia_reticulata
ENSCSAVG00000011080	-	90	38.608	ENSPPYG00000011696	ZMAT5	78	39.552	Pongo_abelii
ENSCSAVG00000011080	-	54	44.444	ENSPCAG00000009438	ZMAT5	53	44.444	Procavia_capensis
ENSCSAVG00000011080	-	90	38.608	ENSPCOG00000020052	ZMAT5	54	46.739	Propithecus_coquereli
ENSCSAVG00000011080	-	77	44.118	ENSPNYG00000008778	zmat5	74	43.846	Pundamilia_nyererei
ENSCSAVG00000011080	-	84	39.597	ENSPNAG00000008209	zmat5	86	39.597	Pygocentrus_nattereri
ENSCSAVG00000011080	-	90	39.241	ENSRNOG00000007849	Zmat5	54	47.826	Rattus_norvegicus
ENSCSAVG00000011080	-	90	38.608	ENSRBIG00000018881	ZMAT5	78	39.552	Rhinopithecus_bieti
ENSCSAVG00000011080	-	90	38.608	ENSRROG00000023979	ZMAT5	78	39.552	Rhinopithecus_roxellana
ENSCSAVG00000011080	-	90	38.608	ENSSBOG00000016696	ZMAT5	78	39.552	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011080	-	90	40.000	ENSSFOG00015017242	zmat5	87	37.748	Scleropages_formosus
ENSCSAVG00000011080	-	84	41.722	ENSSMAG00000001901	zmat5	86	41.722	Scophthalmus_maximus
ENSCSAVG00000011080	-	84	41.333	ENSSDUG00000018849	zmat5	91	41.333	Seriola_dumerili
ENSCSAVG00000011080	-	84	41.333	ENSSLDG00000012409	zmat5	89	41.333	Seriola_lalandi_dorsalis
ENSCSAVG00000011080	-	90	33.544	ENSSARG00000013381	ZMAT5	54	40.217	Sorex_araneus
ENSCSAVG00000011080	-	93	34.177	ENSSPUG00000018968	ZMAT5	57	46.739	Sphenodon_punctatus
ENSCSAVG00000011080	-	53	48.315	ENSSPAG00000006369	zmat5	75	41.045	Stegastes_partitus
ENSCSAVG00000011080	-	55	46.739	ENSSSCG00000024279	ZMAT5	79	39.706	Sus_scrofa
ENSCSAVG00000011080	-	55	48.913	ENSTGUG00000010490	ZMAT5	54	48.913	Taeniopygia_guttata
ENSCSAVG00000011080	-	90	37.195	ENSTRUG00000012501	zmat5	70	38.400	Takifugu_rubripes
ENSCSAVG00000011080	-	71	41.667	ENSTNIG00000009066	zmat5	74	41.667	Tetraodon_nigroviridis
ENSCSAVG00000011080	-	54	46.667	ENSTBEG00000012568	ZMAT5	53	46.667	Tupaia_belangeri
ENSCSAVG00000011080	-	90	37.975	ENSTTRG00000000554	ZMAT5	54	46.739	Tursiops_truncatus
ENSCSAVG00000011080	-	90	35.897	ENSUAMG00000015558	ZMAT5	54	44.565	Ursus_americanus
ENSCSAVG00000011080	-	90	35.897	ENSVVUG00000003593	ZMAT5	54	44.565	Vulpes_vulpes
ENSCSAVG00000011080	-	84	40.000	ENSXMAG00000001402	zmat5	53	46.739	Xiphophorus_maculatus