EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011100 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 16258 bases
Position: chrreftig_16:3000083-3016340
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018902	Ints3	PF10189.9	2.4e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019109	-	2583	-	ENSCSAVP00000018902	861 (aa)	-	H2ZMT6

Gene Model

Click here to download ENSCSAVG00000011100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011100's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011100	-	100	50.567	ENSG00000143624	INTS3	88	74.419	Homo_sapiens
ENSCSAVG00000011100	-	99	48.636	ENSAPOG00000018838	ints3	85	48.750	Acanthochromis_polyacanthus
ENSCSAVG00000011100	-	100	50.227	ENSAMEG00000012085	INTS3	84	50.227	Ailuropoda_melanoleuca
ENSCSAVG00000011100	-	99	48.636	ENSAOCG00000013168	ints3	85	48.750	Amphiprion_ocellaris
ENSCSAVG00000011100	-	99	46.364	ENSAPEG00000018538	ints3	85	46.477	Amphiprion_percula
ENSCSAVG00000011100	-	100	50.567	ENSANAG00000037379	INTS3	84	50.573	Aotus_nancymaae
ENSCSAVG00000011100	-	99	49.093	ENSACLG00000006786	ints3	85	49.206	Astatotilapia_calliptera
ENSCSAVG00000011100	-	97	50.234	ENSAMXG00000011437	ints3	87	50.234	Astyanax_mexicanus
ENSCSAVG00000011100	-	100	50.340	ENSBTAG00000006235	INTS3	87	50.402	Bos_taurus
ENSCSAVG00000011100	-	100	50.567	ENSCJAG00000010155	INTS3	83	50.767	Callithrix_jacchus
ENSCSAVG00000011100	-	93	49.575	ENSCAFG00000017453	INTS3	77	49.575	Canis_familiaris
ENSCSAVG00000011100	-	97	50.818	ENSCAFG00020010273	INTS3	86	50.877	Canis_lupus_dingo
ENSCSAVG00000011100	-	100	50.454	ENSCHIG00000025770	INTS3	84	50.454	Capra_hircus
ENSCSAVG00000011100	-	100	50.454	ENSTSYG00000037547	INTS3	84	50.454	Carlito_syrichta
ENSCSAVG00000011100	-	97	42.385	ENSCAPG00000013132	INTS3	83	42.385	Cavia_aperea
ENSCSAVG00000011100	-	100	47.732	ENSCPOG00000009450	INTS3	83	47.732	Cavia_porcellus
ENSCSAVG00000011100	-	100	48.950	ENSCCAG00000024830	INTS3	82	51.469	Cebus_capucinus
ENSCSAVG00000011100	-	100	50.567	ENSCATG00000043517	INTS3	86	51.111	Cercocebus_atys
ENSCSAVG00000011100	-	100	50.454	ENSCLAG00000003620	INTS3	83	50.454	Chinchilla_lanigera
ENSCSAVG00000011100	-	77	53.028	ENSCSAG00000001872	INTS3	83	53.028	Chlorocebus_sabaeus
ENSCSAVG00000011100	-	99	49.188	ENSCPBG00000024695	INTS3	84	49.247	Chrysemys_picta_bellii
ENSCSAVG00000011100	-	97	80.817	ENSCING00000002537	-	98	80.713	Ciona_intestinalis
ENSCSAVG00000011100	-	100	50.567	ENSCANG00000025992	INTS3	84	50.573	Colobus_angolensis_palliatus
ENSCSAVG00000011100	-	100	50.113	ENSCGRG00001024236	Ints3	84	50.113	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011100	-	100	50.113	ENSCGRG00000004920	Ints3	84	50.113	Cricetulus_griseus_crigri
ENSCSAVG00000011100	-	99	46.599	ENSCSEG00000018322	ints3	85	46.712	Cynoglossus_semilaevis
ENSCSAVG00000011100	-	99	48.811	ENSCVAG00000004832	ints3	85	48.924	Cyprinodon_variegatus
ENSCSAVG00000011100	-	100	49.262	ENSDARG00000016811	ints3	85	49.262	Danio_rerio
ENSCSAVG00000011100	-	100	49.546	ENSDNOG00000013903	INTS3	83	49.546	Dasypus_novemcinctus
ENSCSAVG00000011100	-	100	50.340	ENSDORG00000001484	Ints3	84	50.340	Dipodomys_ordii
ENSCSAVG00000011100	-	84	43.384	FBgn0262117	IntS3	69	43.384	Drosophila_melanogaster
ENSCSAVG00000011100	-	91	47.191	ENSETEG00000002204	INTS3	76	47.191	Echinops_telfairi
ENSCSAVG00000011100	-	99	47.526	ENSEBUG00000003412	ints3	83	47.526	Eptatretus_burgeri
ENSCSAVG00000011100	-	100	50.454	ENSEASG00005000830	INTS3	84	50.454	Equus_asinus_asinus
ENSCSAVG00000011100	-	100	50.454	ENSECAG00000022270	INTS3	84	50.454	Equus_caballus
ENSCSAVG00000011100	-	95	50.652	ENSEEUG00000004649	INTS3	80	50.652	Erinaceus_europaeus
ENSCSAVG00000011100	-	100	49.162	ENSELUG00000000616	ints3	85	49.050	Esox_lucius
ENSCSAVG00000011100	-	100	50.340	ENSFCAG00000002744	INTS3	82	52.867	Felis_catus
ENSCSAVG00000011100	-	100	50.227	ENSFDAG00000005767	INTS3	83	50.227	Fukomys_damarensis
ENSCSAVG00000011100	-	92	48.929	ENSFHEG00000016968	ints3	83	48.929	Fundulus_heteroclitus
ENSCSAVG00000011100	-	100	48.027	ENSGMOG00000004467	ints3	86	48.027	Gadus_morhua
ENSCSAVG00000011100	-	99	49.830	ENSGALG00000027046	INTS3	83	47.446	Gallus_gallus
ENSCSAVG00000011100	-	99	42.743	ENSGAFG00000012876	ints3	84	42.743	Gambusia_affinis
ENSCSAVG00000011100	-	99	48.929	ENSGACG00000010341	ints3	85	48.929	Gasterosteus_aculeatus
ENSCSAVG00000011100	-	99	49.830	ENSGAGG00000000206	INTS3	85	49.830	Gopherus_agassizii
ENSCSAVG00000011100	-	100	50.567	ENSGGOG00000003835	INTS3	83	50.567	Gorilla_gorilla
ENSCSAVG00000011100	-	99	47.279	ENSHBUG00000015312	ints3	85	47.392	Haplochromis_burtoni
ENSCSAVG00000011100	-	100	50.340	ENSHGLG00000008354	INTS3	83	50.340	Heterocephalus_glaber_female
ENSCSAVG00000011100	-	100	50.227	ENSHGLG00100018661	INTS3	84	50.227	Heterocephalus_glaber_male
ENSCSAVG00000011100	-	99	48.578	ENSHCOG00000009084	ints3	85	48.695	Hippocampus_comes
ENSCSAVG00000011100	-	100	48.427	ENSIPUG00000016699	ints3	86	48.210	Ictalurus_punctatus
ENSCSAVG00000011100	-	100	50.454	ENSSTOG00000000670	INTS3	84	50.454	Ictidomys_tridecemlineatus
ENSCSAVG00000011100	-	100	50.113	ENSJJAG00000019885	Ints3	84	50.113	Jaculus_jaculus
ENSCSAVG00000011100	-	99	48.980	ENSKMAG00000001336	ints3	85	49.093	Kryptolebias_marmoratus
ENSCSAVG00000011100	-	99	48.864	ENSLBEG00000024260	ints3	86	48.864	Labrus_bergylta
ENSCSAVG00000011100	-	100	48.416	ENSLACG00000004421	INTS3	86	48.416	Latimeria_chalumnae
ENSCSAVG00000011100	-	100	50.340	ENSLAFG00000002663	INTS3	84	50.340	Loxodonta_africana
ENSCSAVG00000011100	-	100	50.567	ENSMFAG00000008338	INTS3	83	50.567	Macaca_fascicularis
ENSCSAVG00000011100	-	100	50.567	ENSMMUG00000019482	INTS3	83	50.567	Macaca_mulatta
ENSCSAVG00000011100	-	100	48.980	ENSMNEG00000042397	INTS3	83	50.784	Macaca_nemestrina
ENSCSAVG00000011100	-	100	50.567	ENSMLEG00000041804	INTS3	83	50.573	Mandrillus_leucophaeus
ENSCSAVG00000011100	-	99	49.433	ENSMAMG00000022219	ints3	85	49.546	Mastacembelus_armatus
ENSCSAVG00000011100	-	99	49.093	ENSMZEG00005012255	ints3	85	49.206	Maylandia_zebra
ENSCSAVG00000011100	-	100	50.000	ENSMAUG00000003190	Ints3	84	50.000	Mesocricetus_auratus
ENSCSAVG00000011100	-	100	50.454	ENSMICG00000008832	INTS3	84	50.454	Microcebus_murinus
ENSCSAVG00000011100	-	100	50.227	ENSMOCG00000013737	Ints3	84	50.227	Microtus_ochrogaster
ENSCSAVG00000011100	-	99	48.636	ENSMMOG00000017619	ints3	85	48.750	Mola_mola
ENSCSAVG00000011100	-	100	49.887	ENSMODG00000017354	INTS3	84	50.000	Monodelphis_domestica
ENSCSAVG00000011100	-	99	49.433	ENSMALG00000011873	ints3	94	53.801	Monopterus_albus
ENSCSAVG00000011100	-	100	50.113	MGP_CAROLIEiJ_G0025235	Ints3	84	50.113	Mus_caroli
ENSCSAVG00000011100	-	100	50.113	ENSMUSG00000027933	Ints3	84	50.113	Mus_musculus
ENSCSAVG00000011100	-	97	50.058	MGP_PahariEiJ_G0026679	Ints3	84	50.058	Mus_pahari
ENSCSAVG00000011100	-	100	50.113	MGP_SPRETEiJ_G0026178	Ints3	84	50.113	Mus_spretus
ENSCSAVG00000011100	-	97	50.935	ENSMPUG00000008221	INTS3	86	50.994	Mustela_putorius_furo
ENSCSAVG00000011100	-	100	49.717	ENSMLUG00000001857	INTS3	86	49.717	Myotis_lucifugus
ENSCSAVG00000011100	-	100	50.454	ENSNGAG00000023917	Ints3	84	50.454	Nannospalax_galili
ENSCSAVG00000011100	-	99	48.249	ENSNBRG00000021301	ints3	85	48.362	Neolamprologus_brichardi
ENSCSAVG00000011100	-	99	50.228	ENSNLEG00000010578	INTS3	83	50.228	Nomascus_leucogenys
ENSCSAVG00000011100	-	100	46.145	ENSMEUG00000006202	INTS3	83	46.145	Notamacropus_eugenii
ENSCSAVG00000011100	-	99	47.025	ENSOPRG00000003801	INTS3	83	47.025	Ochotona_princeps
ENSCSAVG00000011100	-	100	49.257	ENSODEG00000012581	INTS3	83	49.257	Octodon_degus
ENSCSAVG00000011100	-	99	48.977	ENSONIG00000007567	ints3	85	49.091	Oreochromis_niloticus
ENSCSAVG00000011100	-	100	50.454	ENSOCUG00000005436	INTS3	84	50.454	Oryctolagus_cuniculus
ENSCSAVG00000011100	-	99	49.091	ENSORLG00000001502	ints3	85	49.091	Oryzias_latipes
ENSCSAVG00000011100	-	99	49.205	ENSORLG00020010774	ints3	85	49.205	Oryzias_latipes_hni
ENSCSAVG00000011100	-	99	48.977	ENSORLG00015017985	ints3	85	48.977	Oryzias_latipes_hsok
ENSCSAVG00000011100	-	99	49.091	ENSOMEG00000009881	ints3	91	53.709	Oryzias_melastigma
ENSCSAVG00000011100	-	100	50.340	ENSOGAG00000001080	INTS3	84	50.340	Otolemur_garnettii
ENSCSAVG00000011100	-	100	50.454	ENSOARG00000001095	INTS3	84	50.454	Ovis_aries
ENSCSAVG00000011100	-	100	50.567	ENSPPAG00000034436	INTS3	84	50.573	Pan_paniscus
ENSCSAVG00000011100	-	100	50.340	ENSPPRG00000023995	INTS3	84	50.340	Panthera_pardus
ENSCSAVG00000011100	-	100	50.340	ENSPTIG00000012061	INTS3	84	50.340	Panthera_tigris_altaica
ENSCSAVG00000011100	-	100	50.567	ENSPTRG00000001360	INTS3	84	50.573	Pan_troglodytes
ENSCSAVG00000011100	-	99	50.688	ENSPANG00000016455	INTS3	78	53.147	Papio_anubis
ENSCSAVG00000011100	-	100	49.546	ENSPKIG00000014552	ints3	85	49.546	Paramormyrops_kingsleyae
ENSCSAVG00000011100	-	99	50.113	ENSPMGG00000008191	ints3	85	50.113	Periophthalmus_magnuspinnatus
ENSCSAVG00000011100	-	100	50.113	ENSPEMG00000009736	Ints3	83	50.113	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011100	-	99	50.511	ENSPMAG00000008569	ints3	87	50.567	Petromyzon_marinus
ENSCSAVG00000011100	-	100	49.773	ENSPCIG00000029360	INTS3	84	49.773	Phascolarctos_cinereus
ENSCSAVG00000011100	-	99	47.996	ENSPFOG00000009261	ints3	85	48.107	Poecilia_formosa
ENSCSAVG00000011100	-	99	48.866	ENSPLAG00000006426	ints3	85	48.980	Poecilia_latipinna
ENSCSAVG00000011100	-	99	48.866	ENSPMEG00000015206	ints3	85	48.980	Poecilia_mexicana
ENSCSAVG00000011100	-	99	49.093	ENSPREG00000015731	ints3	87	48.683	Poecilia_reticulata
ENSCSAVG00000011100	-	100	50.567	ENSPPYG00000000797	INTS3	83	50.567	Pongo_abelii
ENSCSAVG00000011100	-	95	50.771	ENSPCAG00000016615	INTS3	80	50.771	Procavia_capensis
ENSCSAVG00000011100	-	97	50.292	ENSPCOG00000022153	INTS3	84	49.470	Propithecus_coquereli
ENSCSAVG00000011100	-	100	46.825	ENSPVAG00000011079	INTS3	83	46.825	Pteropus_vampyrus
ENSCSAVG00000011100	-	99	48.980	ENSPNYG00000010499	ints3	85	49.093	Pundamilia_nyererei
ENSCSAVG00000011100	-	100	49.489	ENSPNAG00000027555	ints3	85	49.603	Pygocentrus_nattereri
ENSCSAVG00000011100	-	100	50.227	ENSRNOG00000015153	Ints3	84	50.227	Rattus_norvegicus
ENSCSAVG00000011100	-	100	48.683	ENSRBIG00000034979	INTS3	78	53.147	Rhinopithecus_bieti
ENSCSAVG00000011100	-	100	50.567	ENSRROG00000032561	INTS3	83	50.567	Rhinopithecus_roxellana
ENSCSAVG00000011100	-	100	50.567	ENSSBOG00000027353	INTS3	83	50.567	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011100	-	99	49.659	ENSSHAG00000010628	INTS3	86	49.659	Sarcophilus_harrisii
ENSCSAVG00000011100	-	97	50.643	ENSSFOG00015009936	ints3	86	50.436	Scleropages_formosus
ENSCSAVG00000011100	-	99	45.011	ENSSMAG00000014949	ints3	85	45.125	Scophthalmus_maximus
ENSCSAVG00000011100	-	99	48.753	ENSSDUG00000000498	ints3	85	48.866	Seriola_dumerili
ENSCSAVG00000011100	-	99	48.753	ENSSLDG00000000547	ints3	85	48.866	Seriola_lalandi_dorsalis
ENSCSAVG00000011100	-	99	48.864	ENSSPAG00000005927	ints3	85	48.977	Stegastes_partitus
ENSCSAVG00000011100	-	100	50.454	ENSSSCG00000006571	INTS3	84	50.454	Sus_scrofa
ENSCSAVG00000011100	-	99	48.646	ENSTNIG00000019793	ints3	85	48.646	Tetraodon_nigroviridis
ENSCSAVG00000011100	-	56	57.554	ENSTBEG00000016928	INTS3	50	56.081	Tupaia_belangeri
ENSCSAVG00000011100	-	100	47.446	ENSTTRG00000014769	INTS3	83	47.560	Tursiops_truncatus
ENSCSAVG00000011100	-	100	50.227	ENSUAMG00000019821	INTS3	84	50.227	Ursus_americanus
ENSCSAVG00000011100	-	100	50.227	ENSUMAG00000020431	INTS3	84	50.227	Ursus_maritimus
ENSCSAVG00000011100	-	99	48.866	ENSXMAG00000017462	ints3	85	48.980	Xiphophorus_maculatus