EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000011146 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1488 bases
Position: chrreftig_9:3393805-3395292
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018974	zf-C2H2	PF00096.26	1.3e-16	1	3
ENSCSAVP00000018974	zf-C2H2	PF00096.26	1.3e-16	2	3
ENSCSAVP00000018974	zf-C2H2	PF00096.26	1.3e-16	3	3
ENSCSAVP00000018974	zf-met	PF12874.7	8.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019181	-	950	-	ENSCSAVP00000018974	144 (aa)	-	H2ZN08

Gene Model

Click here to download ENSCSAVG00000011146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011146's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000011146	-	83	46.429	ENSCSAVG00000002179	-	100	46.429
ENSCSAVG00000011146	-	94	48.315	ENSCSAVG00000004499	-	100	48.315
ENSCSAVG00000011146	-	86	45.455	ENSCSAVG00000009953	-	95	45.455
ENSCSAVG00000011146	-	99	41.538	ENSCSAVG00000006650	-	99	41.860
ENSCSAVG00000011146	-	87	45.217	ENSCSAVG00000010156	-	92	45.217
ENSCSAVG00000011146	-	87	50.633	ENSCSAVG00000000642	-	100	51.562
ENSCSAVG00000011146	-	83	44.944	ENSCSAVG00000000649	-	99	44.944
ENSCSAVG00000011146	-	90	40.506	ENSCSAVG00000005896	-	71	40.506
ENSCSAVG00000011146	-	86	47.541	ENSCSAVG00000000293	-	100	47.541
ENSCSAVG00000011146	-	95	40.741	ENSCSAVG00000009217	-	76	40.741
ENSCSAVG00000011146	-	82	45.000	ENSCSAVG00000001830	-	99	45.000
ENSCSAVG00000011146	-	95	50.000	ENSCSAVG00000001834	-	100	50.000
ENSCSAVG00000011146	-	90	47.191	ENSCSAVG00000009574	-	99	47.191
ENSCSAVG00000011146	-	87	40.506	ENSCSAVG00000006729	-	66	40.506
ENSCSAVG00000011146	-	97	44.681	ENSCSAVG00000004703	-	99	50.000
ENSCSAVG00000011146	-	97	46.512	ENSCSAVG00000006608	-	100	46.512
ENSCSAVG00000011146	-	86	45.745	ENSCSAVG00000004762	-	100	45.745
ENSCSAVG00000011146	-	86	47.727	ENSCSAVG00000001989	-	100	47.727
ENSCSAVG00000011146	-	82	48.276	ENSCSAVG00000007918	-	97	48.276
ENSCSAVG00000011146	-	81	51.282	ENSCSAVG00000001949	-	86	51.282
ENSCSAVG00000011146	-	66	40.230	ENSCSAVG00000009819	-	56	40.230
ENSCSAVG00000011146	-	60	49.412	ENSCSAVG00000005904	-	83	49.412
ENSCSAVG00000011146	-	61	39.062	ENSCSAVG00000009739	-	55	39.062
ENSCSAVG00000011146	-	88	46.250	ENSCSAVG00000000655	-	100	46.067
ENSCSAVG00000011146	-	91	40.000	ENSCSAVG00000004543	-	99	40.000
ENSCSAVG00000011146	-	90	45.570	ENSCSAVG00000000673	-	100	45.570
ENSCSAVG00000011146	-	96	48.193	ENSCSAVG00000006141	-	100	48.193
ENSCSAVG00000011146	-	89	37.879	ENSCSAVG00000006745	-	72	37.879
ENSCSAVG00000011146	-	73	37.273	ENSCSAVG00000011749	-	84	37.273
ENSCSAVG00000011146	-	93	43.956	ENSCSAVG00000007589	-	100	43.956
ENSCSAVG00000011146	-	56	32.877	ENSCSAVG00000003690	-	90	37.500
ENSCSAVG00000011146	-	88	46.296	ENSCSAVG00000010960	-	93	46.296
ENSCSAVG00000011146	-	80	39.286	ENSCSAVG00000003895	-	99	39.286
ENSCSAVG00000011146	-	88	46.988	ENSCSAVG00000004678	-	100	46.988
ENSCSAVG00000011146	-	81	49.367	ENSCSAVG00000000690	-	99	49.367
ENSCSAVG00000011146	-	82	45.455	ENSCSAVG00000001808	-	100	45.455
ENSCSAVG00000011146	-	79	48.780	ENSCSAVG00000008862	-	100	48.780
ENSCSAVG00000011146	-	82	43.678	ENSCSAVG00000000520	-	100	43.678
ENSCSAVG00000011146	-	93	47.312	ENSCSAVG00000009583	-	99	47.312

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011146	-	71	73.786	ENSPMAG00000003606	-	74	73.786	Petromyzon_marinus