EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000011154 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
3790 bases
Position
chrreftig_14:1463944-1467733
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000018990Methyltransf_15PF09445.106.2e-3811
ENSCSAVP00000018990UPF0020PF01170.182.7e-0811
ENSCSAVP00000018990Met_10PF02475.167.1e-0511
ENSCSAVP00000018990Methyltransf_31PF13847.62.8e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000019196-770-ENSCSAVP00000018989246 (aa)-H2ZN23
ENSCSAVT00000019197-1086-ENSCSAVP00000018990302 (aa)-H2ZN24
Gene Model
Click here to download ENSCSAVG00000011154's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011154's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000011154-8477.953ENSCING00000013683-9077.953Ciona_intestinalis
ENSCSAVG00000011154-6956.808ENSDARG00000107511lyn9856.497Danio_rerio
ENSCSAVG00000011154-5851.381ENSGMOG00000015087-9451.381Gadus_morhua
ENSCSAVG00000011154-6855.450ENSGACG00000014724-8355.450Gasterosteus_aculeatus
ENSCSAVG00000011154-5639.344YPL157W-5739.227Saccharomyces_cerevisiae

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us