EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000011162 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
6842 bases
Position
chrreftig_64:146209-153050
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000019011MMR_HSR1PF01926.235.3e-0711
ENSCSAVP00000019013MMR_HSR1PF01926.235.4e-0711
ENSCSAVP00000019012MMR_HSR1PF01926.236e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000019219-980-ENSCSAVP00000019012225 (aa)-H2ZN46
ENSCSAVT00000019218-1245-ENSCSAVP00000019011206 (aa)-H2ZN45
ENSCSAVT00000019220-714-ENSCSAVP00000019013207 (aa)-H2ZN47
Gene Model
Click here to download ENSCSAVG00000011162's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011162's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000011162-7938.650ENSCSAVG00000009128-7638.650
ENSCSAVG00000011162-8038.788ENSCSAVG00000005120-6738.788
ENSCSAVG00000011162-9737.745ENSCSAVG00000010348-9737.745
ENSCSAVG00000011162-7730.864ENSCSAVG00000005450-6930.864
ENSCSAVG00000011162-7937.423ENSCSAVG00000001356-6637.423
ENSCSAVG00000011162-8439.655ENSCSAVG00000009147-8339.655
ENSCSAVG00000011162-8236.905ENSCSAVG00000010245-5836.905
ENSCSAVG00000011162-9634.146ENSCSAVG00000000613-8740.816
ENSCSAVG00000011162-9944.498ENSCSAVG00000005689-10044.286
ENSCSAVG00000011162-8538.636ENSCSAVG00000000160-8038.636
ENSCSAVG00000011162-9530.244ENSCSAVG00000009503-9730.244
ENSCSAVG00000011162-8133.533ENSCSAVG00000006409-6233.533
ENSCSAVG00000011162-8435.519ENSCSAVG00000002804-8435.519
ENSCSAVG00000011162-9538.384ENSCSAVG00000002088-9038.384
ENSCSAVG00000011162-8133.735ENSCSAVG00000006042-7633.735
ENSCSAVG00000011162-8037.576ENSCSAVG00000008995-10037.576
ENSCSAVG00000011162-8337.572ENSCSAVG00000007813-6537.572
ENSCSAVG00000011162-8333.143ENSCSAVG00000008684-8133.143
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000011162-10083.092ENSG00000075785RAB7A10097.701Homo_sapiens
ENSCSAVG00000011162-10083.575ENSAPOG00000002585RAB7A10083.575Acanthochromis_polyacanthus
ENSCSAVG00000011162-10083.092ENSAPOG00000016091-10083.092Acanthochromis_polyacanthus
ENSCSAVG00000011162-10083.092ENSAMEG00000015249RAB7A10083.092Ailuropoda_melanoleuca
ENSCSAVG00000011162-10078.744ENSACIG00000022208-10078.744Amphilophus_citrinellus
ENSCSAVG00000011162-10082.126ENSACIG00000022381-10082.126Amphilophus_citrinellus
ENSCSAVG00000011162-10083.092ENSACIG00000013630RAB7A10083.092Amphilophus_citrinellus
ENSCSAVG00000011162-10083.575ENSAOCG00000005772RAB7A10083.575Amphiprion_ocellaris
ENSCSAVG00000011162-10083.092ENSAOCG00000008820-10083.092Amphiprion_ocellaris
ENSCSAVG00000011162-10083.575ENSAPEG00000000306RAB7A10083.575Amphiprion_percula
ENSCSAVG00000011162-10083.092ENSAPEG00000017200RAB7A10083.092Amphiprion_percula
ENSCSAVG00000011162-10083.092ENSATEG00000002860RAB7A10083.092Anabas_testudineus
ENSCSAVG00000011162-10083.575ENSATEG00000017237RAB7A10083.575Anabas_testudineus
ENSCSAVG00000011162-8588.701ENSAPLG00000004323RAB7A10088.701Anas_platyrhynchos
ENSCSAVG00000011162-10083.092ENSACAG00000005993RAB7A10083.092Anolis_carolinensis
ENSCSAVG00000011162-10083.092ENSANAG00000029692RAB7A10083.092Aotus_nancymaae
ENSCSAVG00000011162-10083.575ENSACLG00000018847RAB7A10083.575Astatotilapia_calliptera
ENSCSAVG00000011162-10068.095ENSACLG00000024456-10068.095Astatotilapia_calliptera
ENSCSAVG00000011162-10082.609ENSACLG00000024502-10082.609Astatotilapia_calliptera
ENSCSAVG00000011162-10081.643ENSAMXG00000002254-10081.643Astyanax_mexicanus
ENSCSAVG00000011162-10081.068ENSAMXG00000031957zgc:10091810081.068Astyanax_mexicanus
ENSCSAVG00000011162-10083.092ENSAMXG00000032027rab7a10083.092Astyanax_mexicanus
ENSCSAVG00000011162-10083.092ENSBTAG00000010193RAB7A10083.092Bos_taurus
ENSCSAVG00000011162-10083.092ENSCJAG00000017521RAB7A10083.092Callithrix_jacchus
ENSCSAVG00000011162-10083.092ENSCAFG00000004157RAB7A10083.092Canis_familiaris
ENSCSAVG00000011162-10083.092ENSCAFG00020004847RAB7A10083.092Canis_lupus_dingo
ENSCSAVG00000011162-10082.609ENSCHIG00000001138RAB7A10082.609Capra_hircus
ENSCSAVG00000011162-10083.092ENSTSYG00000002313RAB7A10083.092Carlito_syrichta
ENSCSAVG00000011162-10083.575ENSCAPG00000010881RAB7A10083.575Cavia_aperea
ENSCSAVG00000011162-10083.575ENSCPOG00000034570RAB7A10083.575Cavia_porcellus
ENSCSAVG00000011162-10083.092ENSCCAG00000036322RAB7A10083.092Cebus_capucinus
ENSCSAVG00000011162-7297.701ENSCLAG00000006333RAB7A10097.701Chinchilla_lanigera
ENSCSAVG00000011162-10083.092ENSCSAG00000008628RAB7A10083.092Chlorocebus_sabaeus
ENSCSAVG00000011162-8589.205ENSCHOG00000000365RAB7A10089.205Choloepus_hoffmanni
ENSCSAVG00000011162-10083.092ENSCPBG00000014343RAB7A10083.092Chrysemys_picta_bellii
ENSCSAVG00000011162-10098.058ENSCING00000007769-10098.058Ciona_intestinalis
ENSCSAVG00000011162-10083.092ENSCANG00000041683RAB7A10083.092Colobus_angolensis_palliatus
ENSCSAVG00000011162-10082.609ENSCGRG00001021807Rab710082.609Cricetulus_griseus_chok1gshd
ENSCSAVG00000011162-10082.609ENSCGRG00000011649Rab710082.609Cricetulus_griseus_crigri
ENSCSAVG00000011162-10083.575ENSCSEG00000005357-10083.575Cynoglossus_semilaevis
ENSCSAVG00000011162-10080.676ENSCSEG00000002970RAB7A9380.676Cynoglossus_semilaevis
ENSCSAVG00000011162-10083.092ENSCVAG00000005429-10083.092Cyprinodon_variegatus
ENSCSAVG00000011162-10083.092ENSCVAG00000000281RAB7A10083.092Cyprinodon_variegatus
ENSCSAVG00000011162-10080.583ENSDARG00000021287rab7b10080.583Danio_rerio
ENSCSAVG00000011162-10082.524ENSDARG00000087243zgc:10091810082.524Danio_rerio
ENSCSAVG00000011162-10083.092ENSDARG00000020497rab7a10083.092Danio_rerio
ENSCSAVG00000011162-10083.092ENSDORG00000027671-10083.092Dipodomys_ordii
ENSCSAVG00000011162-10075.362FBgn0015795Rab710075.362Drosophila_melanogaster
ENSCSAVG00000011162-10070.388ENSEBUG00000003339-10070.388Eptatretus_burgeri
ENSCSAVG00000011162-10083.575ENSEASG00005006800RAB7A10083.575Equus_asinus_asinus
ENSCSAVG00000011162-10083.575ENSECAG00000012559RAB7A10083.575Equus_caballus
ENSCSAVG00000011162-10081.553ENSELUG00000000175zgc:10091810081.553Esox_lucius
ENSCSAVG00000011162-10082.609ENSELUG00000016682-10082.609Esox_lucius
ENSCSAVG00000011162-10083.575ENSELUG00000006539RAB7A10083.575Esox_lucius
ENSCSAVG00000011162-10083.092ENSFCAG00000022971-10083.092Felis_catus
ENSCSAVG00000011162-10082.609ENSFALG00000007930RAB7A10082.609Ficedula_albicollis
ENSCSAVG00000011162-10083.575ENSFDAG00000008524RAB7A10083.575Fukomys_damarensis
ENSCSAVG00000011162-10083.575ENSFHEG00000005588RAB7A8883.575Fundulus_heteroclitus
ENSCSAVG00000011162-10083.092ENSFHEG00000007101RAB7A10083.092Fundulus_heteroclitus
ENSCSAVG00000011162-10083.575ENSGMOG00000011308-10083.575Gadus_morhua
ENSCSAVG00000011162-10083.092ENSGMOG00000007712RAB7A9983.092Gadus_morhua
ENSCSAVG00000011162-10082.609ENSGALG00000005902RAB7A10082.609Gallus_gallus
ENSCSAVG00000011162-10083.092ENSGAFG00000021688-10083.092Gambusia_affinis
ENSCSAVG00000011162-10083.575ENSGAFG00000020476RAB7A10083.575Gambusia_affinis
ENSCSAVG00000011162-10083.092ENSGACG00000000807-9983.092Gasterosteus_aculeatus
ENSCSAVG00000011162-10083.575ENSGACG00000009647RAB7A10083.575Gasterosteus_aculeatus
ENSCSAVG00000011162-10083.092ENSGAGG00000012234RAB7A10083.092Gopherus_agassizii
ENSCSAVG00000011162-10083.092ENSGGOG00000005557RAB7A10083.092Gorilla_gorilla
ENSCSAVG00000011162-10083.575ENSHBUG00000010852RAB7A10083.575Haplochromis_burtoni
ENSCSAVG00000011162-10067.619ENSHBUG00000009027-10067.619Haplochromis_burtoni
ENSCSAVG00000011162-10082.609ENSHBUG00000009014-10082.609Haplochromis_burtoni
ENSCSAVG00000011162-8589.205ENSHGLG00000000127RAB7A8889.205Heterocephalus_glaber_female
ENSCSAVG00000011162-9681.407ENSHGLG00100008802RAB7A9681.407Heterocephalus_glaber_male
ENSCSAVG00000011162-10083.575ENSHCOG00000016322RAB7A10083.575Hippocampus_comes
ENSCSAVG00000011162-9883.582ENSHCOG00000004225-9983.582Hippocampus_comes
ENSCSAVG00000011162-10079.227ENSIPUG00000017200-10079.227Ictalurus_punctatus
ENSCSAVG00000011162-10080.583ENSIPUG00000007246rab7a10080.583Ictalurus_punctatus
ENSCSAVG00000011162-10084.058ENSIPUG00000022445RAB7A10084.058Ictalurus_punctatus
ENSCSAVG00000011162-10083.575ENSSTOG00000028487RAB7A10083.575Ictidomys_tridecemlineatus
ENSCSAVG00000011162-10083.092ENSJJAG00000014204Rab710083.092Jaculus_jaculus
ENSCSAVG00000011162-10081.553ENSKMAG00000020013-10081.553Kryptolebias_marmoratus
ENSCSAVG00000011162-10083.575ENSKMAG00000006812RAB7A10083.575Kryptolebias_marmoratus
ENSCSAVG00000011162-10083.575ENSLBEG00000001796RAB7A10083.575Labrus_bergylta
ENSCSAVG00000011162-10083.092ENSLBEG00000017798-10083.092Labrus_bergylta
ENSCSAVG00000011162-10082.609ENSLACG00000015770RAB7A10082.609Latimeria_chalumnae
ENSCSAVG00000011162-10078.744ENSLACG00000008809zgc:10091810078.744Latimeria_chalumnae
ENSCSAVG00000011162-10080.583ENSLOCG00000015576zgc:1009189980.583Lepisosteus_oculatus
ENSCSAVG00000011162-10083.092ENSLOCG00000014547RAB7A9983.092Lepisosteus_oculatus
ENSCSAVG00000011162-10084.058ENSLAFG00000007945RAB7A10084.058Loxodonta_africana
ENSCSAVG00000011162-10083.092ENSMFAG00000033688RAB7A10083.092Macaca_fascicularis
ENSCSAVG00000011162-10083.092ENSMMUG00000001798RAB7A10083.092Macaca_mulatta
ENSCSAVG00000011162-10083.092ENSMNEG00000033473RAB7A10083.092Macaca_nemestrina
ENSCSAVG00000011162-10083.092ENSMLEG00000040660RAB7A10083.092Mandrillus_leucophaeus
ENSCSAVG00000011162-10083.575ENSMAMG00000020246-10083.575Mastacembelus_armatus
ENSCSAVG00000011162-10082.609ENSMAMG00000023962RAB7A10082.609Mastacembelus_armatus
ENSCSAVG00000011162-10083.575ENSMZEG00005010983RAB7A10083.575Maylandia_zebra
ENSCSAVG00000011162-10067.143ENSMZEG00005009428-10067.143Maylandia_zebra
ENSCSAVG00000011162-10082.609ENSMZEG00005009416-10082.609Maylandia_zebra
ENSCSAVG00000011162-10082.609ENSMGAG00000007208RAB7A10082.609Meleagris_gallopavo
ENSCSAVG00000011162-10080.676ENSMICG00000038752-10080.676Microcebus_murinus
ENSCSAVG00000011162-10083.092ENSMOCG00000002760Rab710083.092Microtus_ochrogaster
ENSCSAVG00000011162-10083.575ENSMMOG00000001434RAB7A10083.575Mola_mola
ENSCSAVG00000011162-10083.092ENSMMOG00000021817-10083.092Mola_mola
ENSCSAVG00000011162-10083.092ENSMODG00000008095RAB7A10083.092Monodelphis_domestica
ENSCSAVG00000011162-10083.575ENSMALG00000016312RAB7A10083.575Monopterus_albus
ENSCSAVG00000011162-10083.575ENSMALG00000004053RAB7A10083.575Monopterus_albus
ENSCSAVG00000011162-10083.092ENSMUSG00000079477Rab710095.918Mus_musculus
ENSCSAVG00000011162-10083.092MGP_PahariEiJ_G0022362Rab710095.918Mus_pahari
ENSCSAVG00000011162-10083.092MGP_SPRETEiJ_G0029636Rab79097.468Mus_spretus
ENSCSAVG00000011162-10083.092ENSMPUG00000017333RAB7A10083.092Mustela_putorius_furo
ENSCSAVG00000011162-10083.092ENSMLUG00000008454RAB7A10083.092Myotis_lucifugus
ENSCSAVG00000011162-10083.092ENSNGAG00000005194Rab710083.092Nannospalax_galili
ENSCSAVG00000011162-10069.231ENSNBRG00000002825-10069.231Neolamprologus_brichardi
ENSCSAVG00000011162-10083.575ENSNBRG00000021829RAB7A10083.575Neolamprologus_brichardi
ENSCSAVG00000011162-10082.609ENSNBRG00000002772-10082.609Neolamprologus_brichardi
ENSCSAVG00000011162-10083.092ENSNLEG00000029309RAB7A10083.092Nomascus_leucogenys
ENSCSAVG00000011162-7989.571ENSODEG00000002835RAB7A10089.571Octodon_degus
ENSCSAVG00000011162-10083.092ENSOCUG00000001645RAB7A10083.092Oryctolagus_cuniculus
ENSCSAVG00000011162-10082.524ENSORLG00000029090-10082.524Oryzias_latipes
ENSCSAVG00000011162-10081.159ENSORLG00000001351-10081.159Oryzias_latipes
ENSCSAVG00000011162-10081.159ENSORLG00020005952rab7a10081.159Oryzias_latipes_hni
ENSCSAVG00000011162-10082.039ENSORLG00015006820-10082.039Oryzias_latipes_hsok
ENSCSAVG00000011162-10095.082ENSORLG00015002344-10081.159Oryzias_latipes_hsok
ENSCSAVG00000011162-10082.609ENSOMEG00000017263-10082.609Oryzias_melastigma
ENSCSAVG00000011162-10081.643ENSOMEG00000010156-10081.643Oryzias_melastigma
ENSCSAVG00000011162-10083.092ENSOGAG00000007885RAB7A10083.092Otolemur_garnettii
ENSCSAVG00000011162-10082.609ENSOARG00000004002RAB7A10082.609Ovis_aries
ENSCSAVG00000011162-10083.092ENSPPRG00000003104-10083.092Panthera_pardus
ENSCSAVG00000011162-10083.092ENSPTIG00000018074RAB7A10083.092Panthera_tigris_altaica
ENSCSAVG00000011162-10081.553ENSPKIG00000007864-10081.553Paramormyrops_kingsleyae
ENSCSAVG00000011162-9780.000ENSPKIG00000025312-9080.000Paramormyrops_kingsleyae
ENSCSAVG00000011162-10080.583ENSPKIG00000021143-10080.583Paramormyrops_kingsleyae
ENSCSAVG00000011162-10083.092ENSPSIG00000011514RAB7A10083.092Pelodiscus_sinensis
ENSCSAVG00000011162-10083.495ENSPMGG00000020405-10083.495Periophthalmus_magnuspinnatus
ENSCSAVG00000011162-10083.092ENSPEMG00000010928Rab710083.092Peromyscus_maniculatus_bairdii
ENSCSAVG00000011162-10083.092ENSPCIG00000000237RAB7A10083.092Phascolarctos_cinereus
ENSCSAVG00000011162-10083.092ENSPFOG00000003465RAB7A10083.092Poecilia_formosa
ENSCSAVG00000011162-10083.092ENSPFOG00000003934-10083.092Poecilia_formosa
ENSCSAVG00000011162-10083.092ENSPLAG00000001065-10083.092Poecilia_latipinna
ENSCSAVG00000011162-10083.092ENSPLAG00000002799RAB7A10083.092Poecilia_latipinna
ENSCSAVG00000011162-10083.092ENSPMEG00000021641-10083.092Poecilia_mexicana
ENSCSAVG00000011162-10083.092ENSPMEG00000004392RAB7A10083.092Poecilia_mexicana
ENSCSAVG00000011162-10083.092ENSPREG00000017750RAB7A10083.092Poecilia_reticulata
ENSCSAVG00000011162-10083.092ENSPREG00000012148RAB7A10083.092Poecilia_reticulata
ENSCSAVG00000011162-10083.092ENSPPYG00000013431RAB7A10083.092Pongo_abelii
ENSCSAVG00000011162-10083.092ENSPVAG00000000951RAB7A10083.092Pteropus_vampyrus
ENSCSAVG00000011162-10083.575ENSPNYG00000020409RAB7A10083.575Pundamilia_nyererei
ENSCSAVG00000011162-10082.609ENSPNYG00000005809-10082.609Pundamilia_nyererei
ENSCSAVG00000011162-10081.643ENSPNAG00000016600-10081.643Pygocentrus_nattereri
ENSCSAVG00000011162-10081.068ENSPNAG00000020583zgc:10091810081.068Pygocentrus_nattereri
ENSCSAVG00000011162-10083.575ENSPNAG00000015164-10083.575Pygocentrus_nattereri
ENSCSAVG00000011162-10083.092ENSRNOG00000012247Rab7a9786.813Rattus_norvegicus
ENSCSAVG00000011162-10083.092ENSRBIG00000034869RAB7A10083.092Rhinopithecus_bieti
ENSCSAVG00000011162-10083.092ENSRROG00000032287RAB7A10083.092Rhinopithecus_roxellana
ENSCSAVG00000011162-10083.092ENSSBOG00000014322RAB7A10083.092Saimiri_boliviensis_boliviensis
ENSCSAVG00000011162-10083.092ENSSHAG00000016787RAB7A10083.092Sarcophilus_harrisii
ENSCSAVG00000011162-10083.092ENSSFOG00015020012rab7a10083.092Scleropages_formosus
ENSCSAVG00000011162-10084.058ENSSFOG00015021180RAB7A10084.058Scleropages_formosus
ENSCSAVG00000011162-10080.583ENSSFOG00015005076zgc:10091810080.583Scleropages_formosus
ENSCSAVG00000011162-10080.583ENSSFOG00015011771-10080.583Scleropages_formosus
ENSCSAVG00000011162-10081.643ENSSMAG00000011579RAB7A10081.643Scophthalmus_maximus
ENSCSAVG00000011162-10083.092ENSSMAG00000001414-8883.092Scophthalmus_maximus
ENSCSAVG00000011162-10083.092ENSSDUG00000008011-10083.092Seriola_dumerili
ENSCSAVG00000011162-10082.609ENSSLDG00000024959-10082.609Seriola_lalandi_dorsalis
ENSCSAVG00000011162-10083.575ENSSLDG00000012391RAB7A10083.575Seriola_lalandi_dorsalis
ENSCSAVG00000011162-10079.904ENSSPUG00000004262RAB7A10079.904Sphenodon_punctatus
ENSCSAVG00000011162-10082.126ENSSPAG00000001423-10082.126Stegastes_partitus
ENSCSAVG00000011162-10083.575ENSSPAG00000023345RAB7A10083.575Stegastes_partitus
ENSCSAVG00000011162-10083.575ENSSSCG00000011615RAB7A10083.575Sus_scrofa
ENSCSAVG00000011162-10082.609ENSTGUG00000007832RAB7A10082.609Taeniopygia_guttata
ENSCSAVG00000011162-10082.609ENSTRUG00000010082RAB7A10082.609Takifugu_rubripes
ENSCSAVG00000011162-10083.575ENSTRUG00000020093-10083.575Takifugu_rubripes
ENSCSAVG00000011162-10083.575ENSTNIG00000011114-10083.575Tetraodon_nigroviridis
ENSCSAVG00000011162-10083.092ENSTTRG00000015258RAB7A10083.092Tursiops_truncatus
ENSCSAVG00000011162-10083.092ENSUAMG00000018967RAB7A10083.092Ursus_americanus
ENSCSAVG00000011162-10083.092ENSUMAG00000015081RAB7A9887.363Ursus_maritimus
ENSCSAVG00000011162-10083.092ENSVVUG00000018308RAB7A9594.393Vulpes_vulpes
ENSCSAVG00000011162-10083.092ENSXETG00000016176rab7a10083.092Xenopus_tropicalis
ENSCSAVG00000011162-10083.092ENSXCOG00000019921rab7a10083.092Xiphophorus_couchianus
ENSCSAVG00000011162-10083.092ENSXMAG00000024665RAB7A10083.092Xiphophorus_maculatus
ENSCSAVG00000011162-10083.575ENSXMAG00000023285RAB7A10083.575Xiphophorus_maculatus

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