EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000011230 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
17126 bases
Position
chrreftig_48:3258320-3275445
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000019123PARPPF00644.201.5e-2411
ENSCSAVP00000019125PARPPF00644.201.6e-2411
ENSCSAVP00000019124PARPPF00644.205.5e-2311
ENSCSAVP00000019126PARPPF00644.202.4e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000019334-166-ENSCSAVP0000001912736 (aa)-H2ZNG1
ENSCSAVT00000019330-3746-ENSCSAVP000000191231133 (aa)-H2ZNF7
ENSCSAVT00000019331-3683-ENSCSAVP000000191241113 (aa)-H2ZNF8
ENSCSAVT00000019332-3679-ENSCSAVP000000191251127 (aa)-H2ZNF9
ENSCSAVT00000019333-2908-ENSCSAVP00000019126949 (aa)-H2ZNG0
Gene Model
Click here to download ENSCSAVG00000011230's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011230's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000011230-9973.670ENSG00000173273TNKS10091.176Homo_sapiens
ENSCSAVG00000011230-9973.841ENSAPOG00000020148tnksb9970.124Acanthochromis_polyacanthus
ENSCSAVG00000011230-10067.507ENSAPOG00000020020tnksa8870.194Acanthochromis_polyacanthus
ENSCSAVG00000011230-9973.211ENSAMEG00000005992TNKS8772.602Ailuropoda_melanoleuca
ENSCSAVG00000011230-9964.742ENSACIG00000018757tnksb9164.886Amphilophus_citrinellus
ENSCSAVG00000011230-9973.578ENSAOCG00000010070tnksb9773.773Amphiprion_ocellaris
ENSCSAVG00000011230-9973.578ENSAPEG00000006372tnksb9872.318Amphiprion_percula
ENSCSAVG00000011230-9973.371ENSAPEG00000002584tnksa9973.615Amphiprion_percula
ENSCSAVG00000011230-10073.391ENSATEG00000021596tnksa9873.620Anabas_testudineus
ENSCSAVG00000011230-9973.216ENSATEG00000016200TNKS9973.296Anabas_testudineus
ENSCSAVG00000011230-9973.121ENSAPLG00000002335TNKS9073.002Anas_platyrhynchos
ENSCSAVG00000011230-10073.606ENSACAG00000002619TNKS8973.620Anolis_carolinensis
ENSCSAVG00000011230-9973.450ENSANAG00000022197TNKS8872.924Aotus_nancymaae
ENSCSAVG00000011230-9978.475ENSACLG00000024068tnksa9869.897Astatotilapia_calliptera
ENSCSAVG00000011230-9974.032ENSACLG00000020662tnksb9872.532Astatotilapia_calliptera
ENSCSAVG00000011230-9972.837ENSAMXG00000036982tnksb9571.453Astyanax_mexicanus
ENSCSAVG00000011230-9973.537ENSBTAG00000001463TNKS8772.924Bos_taurus
ENSCSAVG00000011230-9973.450ENSCJAG00000012143TNKS8772.924Callithrix_jacchus
ENSCSAVG00000011230-9973.362ENSCAFG00000006632TNKS8772.751Canis_familiaris
ENSCSAVG00000011230-9973.450ENSCHIG00000007929TNKS9872.837Capra_hircus
ENSCSAVG00000011230-9973.799ENSTSYG00000004540TNKS9974.064Carlito_syrichta
ENSCSAVG00000011230-9962.375ENSCAPG00000010886TNKS9963.695Cavia_aperea
ENSCSAVG00000011230-9973.537ENSCPOG00000010040TNKS8873.097Cavia_porcellus
ENSCSAVG00000011230-9973.450ENSCCAG00000020538TNKS8872.924Cebus_capucinus
ENSCSAVG00000011230-9973.732ENSCATG00000037530TNKS9973.862Cercocebus_atys
ENSCSAVG00000011230-9973.537ENSCLAG00000001619TNKS8773.241Chinchilla_lanigera
ENSCSAVG00000011230-9973.450ENSCSAG00000016874TNKS8773.010Chlorocebus_sabaeus
ENSCSAVG00000011230-9959.738ENSCHOG00000002500TNKS8759.036Choloepus_hoffmanni
ENSCSAVG00000011230-9972.818ENSCPBG00000027190-9973.104Chrysemys_picta_bellii
ENSCSAVG00000011230-9973.450ENSCANG00000041684TNKS8773.010Colobus_angolensis_palliatus
ENSCSAVG00000011230-9973.450ENSCGRG00001020318Tnks8673.703Cricetulus_griseus_chok1gshd
ENSCSAVG00000011230-9973.450ENSCGRG00000015982Tnks9773.398Cricetulus_griseus_crigri
ENSCSAVG00000011230-9972.820ENSCSEG00000011218tnksb9973.527Cynoglossus_semilaevis
ENSCSAVG00000011230-10073.114ENSCSEG00000005154-8873.444Cynoglossus_semilaevis
ENSCSAVG00000011230-9969.483ENSCVAG00000014693tnksa9464.308Cyprinodon_variegatus
ENSCSAVG00000011230-9973.519ENSCVAG00000017903tnksb9471.806Cyprinodon_variegatus
ENSCSAVG00000011230-10074.081ENSDARG00000062897tnksb9073.550Danio_rerio
ENSCSAVG00000011230-9973.886ENSDARG00000077650tnksa9372.852Danio_rerio
ENSCSAVG00000011230-8871.584ENSDORG00000011584Tnks8471.107Dipodomys_ordii
ENSCSAVG00000011230-9971.739ENSETEG00000011217TNKS8270.608Echinops_telfairi
ENSCSAVG00000011230-9870.424ENSEBUG00000014360-9870.868Eptatretus_burgeri
ENSCSAVG00000011230-9973.450ENSEASG00005016972TNKS8772.980Equus_asinus_asinus
ENSCSAVG00000011230-9973.450ENSECAG00000007431TNKS8772.980Equus_caballus
ENSCSAVG00000011230-9967.424ENSEEUG00000004699TNKS8766.869Erinaceus_europaeus
ENSCSAVG00000011230-9973.328ENSELUG00000002184tnksa9371.942Esox_lucius
ENSCSAVG00000011230-9973.362ENSELUG00000008089tnksb9969.094Esox_lucius
ENSCSAVG00000011230-9973.629ENSFCAG00000008484TNKS8772.837Felis_catus
ENSCSAVG00000011230-9973.769ENSFALG00000006742TNKS9974.031Ficedula_albicollis
ENSCSAVG00000011230-9973.450ENSFDAG00000008742TNKS8773.010Fukomys_damarensis
ENSCSAVG00000011230-10073.791ENSFHEG00000012036tnksa8973.778Fundulus_heteroclitus
ENSCSAVG00000011230-9970.583ENSFHEG00000022069tnksb9170.516Fundulus_heteroclitus
ENSCSAVG00000011230-9973.514ENSGMOG00000007567tnksb9273.053Gadus_morhua
ENSCSAVG00000011230-9973.450ENSGALG00000043164TNKS9173.462Gallus_gallus
ENSCSAVG00000011230-9875.333ENSGAFG00000005600tnksa9975.238Gambusia_affinis
ENSCSAVG00000011230-9973.684ENSGAFG00000006184tnksb9273.205Gambusia_affinis
ENSCSAVG00000011230-9973.620ENSGACG00000012837tnksb9173.398Gasterosteus_aculeatus
ENSCSAVG00000011230-9971.948ENSGACG00000017729tnksa9671.927Gasterosteus_aculeatus
ENSCSAVG00000011230-9973.370ENSGAGG00000020677TNKS9873.631Gopherus_agassizii
ENSCSAVG00000011230-9973.450ENSGGOG00000011691TNKS8872.318Gorilla_gorilla
ENSCSAVG00000011230-9978.475ENSHBUG00000023389tnksa9869.711Haplochromis_burtoni
ENSCSAVG00000011230-9973.753ENSHBUG00000011486tnksb9970.583Haplochromis_burtoni
ENSCSAVG00000011230-9973.275ENSHGLG00000003279TNKS8772.837Heterocephalus_glaber_female
ENSCSAVG00000011230-9973.362ENSHGLG00100018150TNKS8772.924Heterocephalus_glaber_male
ENSCSAVG00000011230-9972.928ENSHCOG00000004945-9073.091Hippocampus_comes
ENSCSAVG00000011230-9972.870ENSHCOG00000000804tnksb9768.352Hippocampus_comes
ENSCSAVG00000011230-9974.298ENSIPUG00000004366tnksa9273.167Ictalurus_punctatus
ENSCSAVG00000011230-9973.633ENSIPUG00000023527tnksb9273.797Ictalurus_punctatus
ENSCSAVG00000011230-9973.537ENSSTOG00000014515TNKS8673.661Ictidomys_tridecemlineatus
ENSCSAVG00000011230-9973.509ENSJJAG00000010315Tnks8871.945Jaculus_jaculus
ENSCSAVG00000011230-10073.114ENSKMAG00000014133tnksa9973.726Kryptolebias_marmoratus
ENSCSAVG00000011230-9973.478ENSKMAG00000010617tnksb9173.339Kryptolebias_marmoratus
ENSCSAVG00000011230-9973.345ENSLBEG00000008123tnksb9371.795Labrus_bergylta
ENSCSAVG00000011230-9974.253ENSLACG00000005186TNKS9274.447Latimeria_chalumnae
ENSCSAVG00000011230-9973.785ENSLOCG00000012168tnksb9073.164Lepisosteus_oculatus
ENSCSAVG00000011230-9973.386ENSLAFG00000004786TNKS9972.234Loxodonta_africana
ENSCSAVG00000011230-9973.450ENSMFAG00000029976TNKS8873.010Macaca_fascicularis
ENSCSAVG00000011230-9973.902ENSMMUG00000000965TNKS9973.281Macaca_mulatta
ENSCSAVG00000011230-9973.450ENSMNEG00000041191TNKS8872.318Macaca_nemestrina
ENSCSAVG00000011230-9973.450ENSMLEG00000029520TNKS8873.010Mandrillus_leucophaeus
ENSCSAVG00000011230-10073.443ENSMAMG00000006069tnksa9773.730Mastacembelus_armatus
ENSCSAVG00000011230-9973.666ENSMAMG00000001610tnksb9173.380Mastacembelus_armatus
ENSCSAVG00000011230-9978.475ENSMZEG00005016736tnksa9869.897Maylandia_zebra
ENSCSAVG00000011230-9973.753ENSMZEG00005018767tnksb9970.627Maylandia_zebra
ENSCSAVG00000011230-9973.532ENSMGAG00000008814TNKS9973.568Meleagris_gallopavo
ENSCSAVG00000011230-9967.424ENSMAUG00000007100Tnks8667.340Mesocricetus_auratus
ENSCSAVG00000011230-9973.450ENSMICG00000012998TNKS8872.837Microcebus_murinus
ENSCSAVG00000011230-9973.362ENSMOCG00000022402Tnks8673.615Microtus_ochrogaster
ENSCSAVG00000011230-9970.055ENSMMOG00000021234tnksa9870.837Mola_mola
ENSCSAVG00000011230-9979.790ENSMMOG00000010431tnksb9870.308Mola_mola
ENSCSAVG00000011230-10073.298ENSMODG00000019017TNKS8573.527Monodelphis_domestica
ENSCSAVG00000011230-9867.582ENSMALG00000017373tnksb9669.596Monopterus_albus
ENSCSAVG00000011230-10073.514ENSMALG00000011965tnksa9171.921Monopterus_albus
ENSCSAVG00000011230-9973.537MGP_CAROLIEiJ_G0030977Tnks8673.791Mus_caroli
ENSCSAVG00000011230-9973.450ENSMUSG00000031529Tnks9887.838Mus_musculus
ENSCSAVG00000011230-9973.450MGP_PahariEiJ_G0021445Tnks8673.703Mus_pahari
ENSCSAVG00000011230-9973.450MGP_SPRETEiJ_G0032093Tnks8673.703Mus_spretus
ENSCSAVG00000011230-9973.791ENSMPUG00000011383TNKS8673.020Mustela_putorius_furo
ENSCSAVG00000011230-9973.947ENSMLUG00000007233TNKS8772.664Myotis_lucifugus
ENSCSAVG00000011230-9973.450ENSNGAG00000000489Tnks8773.154Nannospalax_galili
ENSCSAVG00000011230-9975.568ENSNBRG00000001274tnksb9061.538Neolamprologus_brichardi
ENSCSAVG00000011230-9965.564ENSNBRG00000009869tnksa9768.887Neolamprologus_brichardi
ENSCSAVG00000011230-9969.324ENSNLEG00000014966TNKS8869.171Nomascus_leucogenys
ENSCSAVG00000011230-9386.486ENSMEUG00000012690-7186.486Notamacropus_eugenii
ENSCSAVG00000011230-9885.870ENSOPRG00000008706TNKS7485.870Ochotona_princeps
ENSCSAVG00000011230-9973.450ENSODEG00000004893TNKS8773.010Octodon_degus
ENSCSAVG00000011230-10073.090ENSONIG00000004019tnksa9073.578Oreochromis_niloticus
ENSCSAVG00000011230-9973.753ENSONIG00000011131tnksb9372.099Oreochromis_niloticus
ENSCSAVG00000011230-10073.124ENSOANG00000008567-9773.351Ornithorhynchus_anatinus
ENSCSAVG00000011230-9973.362ENSOCUG00000017773TNKS8872.924Oryctolagus_cuniculus
ENSCSAVG00000011230-9974.074ENSORLG00000029690tnksb9869.850Oryzias_latipes
ENSCSAVG00000011230-10073.287ENSORLG00000011341tnksa9968.897Oryzias_latipes
ENSCSAVG00000011230-10073.137ENSORLG00020010345tnksa9969.545Oryzias_latipes_hni
ENSCSAVG00000011230-10073.050ENSORLG00015023233tnksa9872.408Oryzias_latipes_hsok
ENSCSAVG00000011230-10073.304ENSOMEG00000021619tnksa8973.532Oryzias_melastigma
ENSCSAVG00000011230-9973.841ENSOMEG00000018326tnksb9272.695Oryzias_melastigma
ENSCSAVG00000011230-9973.450ENSOGAG00000007325TNKS8772.980Otolemur_garnettii
ENSCSAVG00000011230-9973.450ENSOARG00000010142TNKS9472.712Ovis_aries
ENSCSAVG00000011230-9973.450ENSPPAG00000029358TNKS8872.318Pan_paniscus
ENSCSAVG00000011230-9973.629ENSPPRG00000009656TNKS8772.837Panthera_pardus
ENSCSAVG00000011230-9973.583ENSPTIG00000021233TNKS9973.849Panthera_tigris_altaica
ENSCSAVG00000011230-9973.450ENSPTRG00000019972TNKS9773.101Pan_troglodytes
ENSCSAVG00000011230-9973.450ENSPANG00000023565TNKS8873.010Papio_anubis
ENSCSAVG00000011230-9973.841ENSPKIG00000021889tnksb9870.149Paramormyrops_kingsleyae
ENSCSAVG00000011230-9972.551ENSPSIG00000003346TNKS9972.800Pelodiscus_sinensis
ENSCSAVG00000011230-9988.827ENSPMGG00000005157tnksa9888.827Periophthalmus_magnuspinnatus
ENSCSAVG00000011230-9971.986ENSPMGG00000001350tnksb9371.453Periophthalmus_magnuspinnatus
ENSCSAVG00000011230-9973.670ENSPEMG00000015511Tnks9973.937Peromyscus_maniculatus_bairdii
ENSCSAVG00000011230-9973.230ENSPMAG00000008655-8873.264Petromyzon_marinus
ENSCSAVG00000011230-9971.486ENSPCIG00000011378-9965.134Phascolarctos_cinereus
ENSCSAVG00000011230-10073.200ENSPFOG00000004982tnksa9073.147Poecilia_formosa
ENSCSAVG00000011230-9973.322ENSPFOG00000012237tnksb9272.759Poecilia_formosa
ENSCSAVG00000011230-10071.429ENSPLAG00000004341-8972.465Poecilia_latipinna
ENSCSAVG00000011230-9974.009ENSPLAG00000014512tnksb9673.205Poecilia_latipinna
ENSCSAVG00000011230-10073.114ENSPMEG00000019006tnksa8973.491Poecilia_mexicana
ENSCSAVG00000011230-9973.707ENSPMEG00000018884tnksb9273.141Poecilia_mexicana
ENSCSAVG00000011230-9973.620ENSPREG00000019745tnksb9273.141Poecilia_reticulata
ENSCSAVG00000011230-10073.200ENSPREG00000005920tnksa8973.578Poecilia_reticulata
ENSCSAVG00000011230-9973.450ENSPPYG00000018367TNKS8773.010Pongo_abelii
ENSCSAVG00000011230-8883.491ENSPCAG00000008732TNKS7483.491Procavia_capensis
ENSCSAVG00000011230-9973.450ENSPVAG00000011017TNKS8772.924Pteropus_vampyrus
ENSCSAVG00000011230-9978.475ENSPNYG00000011308tnksa9869.711Pundamilia_nyererei
ENSCSAVG00000011230-9974.152ENSPNYG00000003131tnksb9974.608Pundamilia_nyererei
ENSCSAVG00000011230-9964.587ENSPNAG00000011906tnksb9865.234Pygocentrus_nattereri
ENSCSAVG00000011230-9972.957ENSPNAG00000010036tnksa9172.193Pygocentrus_nattereri
ENSCSAVG00000011230-9973.275ENSRNOG00000011625Tnks8673.527Rattus_norvegicus
ENSCSAVG00000011230-9970.306ENSRBIG00000039501TNKS8769.983Rhinopithecus_bieti
ENSCSAVG00000011230-9973.450ENSRROG00000019710TNKS8773.010Rhinopithecus_roxellana
ENSCSAVG00000011230-9973.450ENSSBOG00000018538TNKS8872.924Saimiri_boliviensis_boliviensis
ENSCSAVG00000011230-9973.419ENSSHAG00000012922-9973.660Sarcophilus_harrisii
ENSCSAVG00000011230-9974.214ENSSFOG00015019144tnksb9074.255Scleropages_formosus
ENSCSAVG00000011230-10072.830ENSSMAG00000018031tnksa8772.372Scophthalmus_maximus
ENSCSAVG00000011230-9979.542ENSSMAG00000019175tnksb9970.588Scophthalmus_maximus
ENSCSAVG00000011230-9973.391ENSSDUG00000001625tnksb9870.436Seriola_dumerili
ENSCSAVG00000011230-9974.081ENSSDUG00000020636-8574.536Seriola_dumerili
ENSCSAVG00000011230-9974.081ENSSLDG00000018496-8673.550Seriola_lalandi_dorsalis
ENSCSAVG00000011230-9973.928ENSSLDG00000017391tnksb9870.018Seriola_lalandi_dorsalis
ENSCSAVG00000011230-9973.362ENSSARG00000013977TNKS8673.310Sorex_araneus
ENSCSAVG00000011230-9973.498ENSSPUG00000004444TNKS9171.775Sphenodon_punctatus
ENSCSAVG00000011230-9974.123ENSSPAG00000014845tnksb9173.898Stegastes_partitus
ENSCSAVG00000011230-9871.294ENSSPAG00000001035-9771.105Stegastes_partitus
ENSCSAVG00000011230-9973.450ENSSSCG00000015851TNKS8772.980Sus_scrofa
ENSCSAVG00000011230-9973.450ENSTGUG00000004835TNKS9572.633Taeniopygia_guttata
ENSCSAVG00000011230-9973.432ENSTRUG00000010518tnksb9172.251Takifugu_rubripes
ENSCSAVG00000011230-9971.968ENSTRUG00000010911tnksa8871.905Takifugu_rubripes
ENSCSAVG00000011230-9973.281ENSTNIG00000018875tnksb9272.625Tetraodon_nigroviridis
ENSCSAVG00000011230-9971.453ENSTNIG00000013232tnksa9070.119Tetraodon_nigroviridis
ENSCSAVG00000011230-9291.406ENSTTRG00000007093TNKS7691.406Tursiops_truncatus
ENSCSAVG00000011230-9968.600ENSUAMG00000012430TNKS9960.436Ursus_americanus
ENSCSAVG00000011230-9973.362ENSUMAG00000007498TNKS9973.310Ursus_maritimus
ENSCSAVG00000011230-9867.765ENSVPAG00000007821TNKS9867.108Vicugna_pacos
ENSCSAVG00000011230-9973.362ENSVVUG00000019734TNKS8772.751Vulpes_vulpes
ENSCSAVG00000011230-10073.147ENSXETG00000008155tnks28872.727Xenopus_tropicalis
ENSCSAVG00000011230-10065.909ENSXCOG00000005282tnksa9764.198Xiphophorus_couchianus
ENSCSAVG00000011230-9973.258ENSXCOG00000015205tnksb9273.292Xiphophorus_couchianus
ENSCSAVG00000011230-9978.869ENSXMAG00000004961tnksb9870.588Xiphophorus_maculatus
ENSCSAVG00000011230-9979.671ENSXMAG00000002312tnksa9771.429Xiphophorus_maculatus

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