EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000011264 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
7408 bases
Position
chrreftig_16:3380182-3387589
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000019182GTP_EFTUPF00009.271.3e-2111
ENSCSAVP00000019181GTP_EFTUPF00009.271.3e-2111
ENSCSAVP00000019180GTP_EFTUPF00009.271.3e-2111
ENSCSAVP00000019183GTP_EFTU_D2PF03144.253e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000019389-2188-ENSCSAVP00000019182556 (aa)-H2ZNL6
ENSCSAVT00000019388-2180-ENSCSAVP00000019181564 (aa)-H2ZNL5
ENSCSAVT00000019390-1025-ENSCSAVP00000019183248 (aa)-H2ZNL7
ENSCSAVT00000019387-1936-ENSCSAVP00000019180566 (aa)-H2ZNL4
Gene Model
Click here to download ENSCSAVG00000011264's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011264's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000011264-9840.768ENSCSAVG00000008731-9943.182
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000011264-10058.094ENSG00000172432GTPBP29168.385Homo_sapiens
ENSCSAVG00000011264-10056.655ENSAPOG00000001083GTPBP28858.647Acanthochromis_polyacanthus
ENSCSAVG00000011264-10057.554ENSAPOG00000000619gtpbp2b8958.564Acanthochromis_polyacanthus
ENSCSAVG00000011264-10057.554ENSAMEG00000012148GTPBP28659.887Ailuropoda_melanoleuca
ENSCSAVG00000011264-9857.038ENSACIG00000020526gtpbp2b8759.810Amphilophus_citrinellus
ENSCSAVG00000011264-9856.856ENSACIG00000002352GTPBP28859.733Amphilophus_citrinellus
ENSCSAVG00000011264-10057.014ENSAOCG00000003526GTPBP28759.542Amphiprion_ocellaris
ENSCSAVG00000011264-10057.194ENSAOCG00000013397gtpbp2b8958.195Amphiprion_ocellaris
ENSCSAVG00000011264-10057.014ENSAPEG00000020871gtpbp2b8858.088Amphiprion_percula
ENSCSAVG00000011264-10056.835ENSAPEG00000010531GTPBP28858.835Amphiprion_percula
ENSCSAVG00000011264-10057.194ENSATEG00000004370-8859.211Anabas_testudineus
ENSCSAVG00000011264-10057.014ENSATEG00000016911gtpbp2b8858.272Anabas_testudineus
ENSCSAVG00000011264-10058.273ENSACAG00000010036GTPBP28859.888Anolis_carolinensis
ENSCSAVG00000011264-9758.178ENSANAG00000037352GTPBP29561.233Aotus_nancymaae
ENSCSAVG00000011264-10057.374ENSACLG00000014839GTPBP28859.774Astatotilapia_calliptera
ENSCSAVG00000011264-10057.554ENSACLG00000013857gtpbp2b8660.190Astatotilapia_calliptera
ENSCSAVG00000011264-9959.173ENSAMXG00000038826-8661.597Astyanax_mexicanus
ENSCSAVG00000011264-9057.968ENSAMXG00000004624gtpbp2b8361.134Astyanax_mexicanus
ENSCSAVG00000011264-10058.094ENSBTAG00000006016GTPBP28861.336Bos_taurus
ENSCSAVG00000011264-10042.086WBGene00011449T04H1.29042.190Caenorhabditis_elegans
ENSCSAVG00000011264-10058.094ENSCJAG00000005800GTPBP28961.233Callithrix_jacchus
ENSCSAVG00000011264-10057.914ENSCAFG00000001918GTPBP28760.264Canis_familiaris
ENSCSAVG00000011264-10057.914ENSCAFG00020012050GTPBP29959.844Canis_lupus_dingo
ENSCSAVG00000011264-10058.094ENSCHIG00000011328GTPBP28760.452Capra_hircus
ENSCSAVG00000011264-10057.914ENSTSYG00000029088GTPBP29260.196Carlito_syrichta
ENSCSAVG00000011264-10055.396ENSCAPG00000008518GTPBP29757.439Cavia_aperea
ENSCSAVG00000011264-10057.914ENSCPOG00000026957GTPBP28760.264Cavia_porcellus
ENSCSAVG00000011264-10058.094ENSCCAG00000034278GTPBP29960.039Cebus_capucinus
ENSCSAVG00000011264-10058.094ENSCATG00000044605GTPBP29960.039Cercocebus_atys
ENSCSAVG00000011264-10057.914ENSCLAG00000010271GTPBP28760.264Chinchilla_lanigera
ENSCSAVG00000011264-10058.094ENSCSAG00000012105GTPBP28760.452Chlorocebus_sabaeus
ENSCSAVG00000011264-10057.734ENSCPBG00000025223GTPBP29660.079Chrysemys_picta_bellii
ENSCSAVG00000011264-10085.612ENSCING00000024178-9487.857Ciona_intestinalis
ENSCSAVG00000011264-9557.656ENSCANG00000043263GTPBP29960.039Colobus_angolensis_palliatus
ENSCSAVG00000011264-10057.914ENSCGRG00001006422Gtpbp28760.264Cricetulus_griseus_chok1gshd
ENSCSAVG00000011264-10057.014ENSCGRG00000005459Gtpbp28859.322Cricetulus_griseus_crigri
ENSCSAVG00000011264-9856.960ENSCSEG00000001025gtpbp2b8757.904Cynoglossus_semilaevis
ENSCSAVG00000011264-10056.295ENSCSEG00000000936-8658.287Cynoglossus_semilaevis
ENSCSAVG00000011264-10057.014ENSCVAG00000016367GTPBP28858.582Cyprinodon_variegatus
ENSCSAVG00000011264-10057.554ENSDARG00000071059gtpbp2b8660.190Danio_rerio
ENSCSAVG00000011264-9254.688ENSDNOG00000037272GTPBP28857.613Dasypus_novemcinctus
ENSCSAVG00000011264-10057.734ENSDORG00000000443Gtpbp28760.075Dipodomys_ordii
ENSCSAVG00000011264-9949.643FBgn0037391CG20178651.595Drosophila_melanogaster
ENSCSAVG00000011264-10057.914ENSETEG00000010814GTPBP28760.264Echinops_telfairi
ENSCSAVG00000011264-10056.835ENSEBUG00000010999gtpbp2b8662.243Eptatretus_burgeri
ENSCSAVG00000011264-10057.734ENSEASG00005003383GTPBP28859.887Equus_asinus_asinus
ENSCSAVG00000011264-9757.807ENSECAG00000024984GTPBP25960.835Equus_caballus
ENSCSAVG00000011264-10057.914ENSEEUG00000004099GTPBP28860.264Erinaceus_europaeus
ENSCSAVG00000011264-10057.734ENSELUG00000008544GTPBP28660.150Esox_lucius
ENSCSAVG00000011264-10058.094ENSELUG00000003988gtpbp2b8760.687Esox_lucius
ENSCSAVG00000011264-10057.734ENSFCAG00000009742GTPBP29260.075Felis_catus
ENSCSAVG00000011264-9557.656ENSFALG00000012153GTPBP29660.474Ficedula_albicollis
ENSCSAVG00000011264-10057.734ENSFDAG00000016949GTPBP29160.075Fukomys_damarensis
ENSCSAVG00000011264-10056.655ENSFHEG00000001973GTPBP28757.721Fundulus_heteroclitus
ENSCSAVG00000011264-10051.259ENSGMOG00000005563gtpbp2b8853.640Gadus_morhua
ENSCSAVG00000011264-8568.350ENSGMOG00000012655GTPBP27767.320Gadus_morhua
ENSCSAVG00000011264-10057.914ENSGALG00000010315GTPBP28660.687Gallus_gallus
ENSCSAVG00000011264-10056.835ENSGAFG00000010216GTPBP28658.582Gambusia_affinis
ENSCSAVG00000011264-10056.835ENSGAFG00000017822gtpbp2b8858.442Gambusia_affinis
ENSCSAVG00000011264-10056.295ENSGACG00000019729gtpbp2b8859.004Gasterosteus_aculeatus
ENSCSAVG00000011264-10056.530ENSGACG00000009007-8859.203Gasterosteus_aculeatus
ENSCSAVG00000011264-9958.123ENSGAGG00000017978GTPBP29360.687Gopherus_agassizii
ENSCSAVG00000011264-10058.094ENSGGOG00000014744GTPBP29962.092Gorilla_gorilla
ENSCSAVG00000011264-9353.321ENSHBUG00000008900-9955.777Haplochromis_burtoni
ENSCSAVG00000011264-10057.374ENSHBUG00000020061GTPBP28859.774Haplochromis_burtoni
ENSCSAVG00000011264-10057.734ENSHGLG00000014886GTPBP28760.075Heterocephalus_glaber_female
ENSCSAVG00000011264-10057.734ENSHGLG00100009549GTPBP29360.075Heterocephalus_glaber_male
ENSCSAVG00000011264-8851.376ENSHCOG00000010318-9949.337Hippocampus_comes
ENSCSAVG00000011264-9056.859ENSHCOG00000017883GTPBP28060.168Hippocampus_comes
ENSCSAVG00000011264-10058.094ENSIPUG00000010106gtpbp2b8860.302Ictalurus_punctatus
ENSCSAVG00000011264-10057.374ENSIPUG00000016892-8760.038Ictalurus_punctatus
ENSCSAVG00000011264-10057.914ENSSTOG00000021274GTPBP28760.264Ictidomys_tridecemlineatus
ENSCSAVG00000011264-10058.094ENSJJAG00000023430Gtpbp28760.452Jaculus_jaculus
ENSCSAVG00000011264-10057.014ENSKMAG00000006988-9358.272Kryptolebias_marmoratus
ENSCSAVG00000011264-10056.272ENSKMAG00000019007GTPBP28858.240Kryptolebias_marmoratus
ENSCSAVG00000011264-10056.655ENSLBEG00000002749GTPBP28758.835Labrus_bergylta
ENSCSAVG00000011264-9257.588ENSLACG00000005960GTPBP29957.476Latimeria_chalumnae
ENSCSAVG00000011264-10057.734ENSLOCG00000015720GTPBP28660.536Lepisosteus_oculatus
ENSCSAVG00000011264-10058.094ENSLAFG00000022990GTPBP28860.264Loxodonta_africana
ENSCSAVG00000011264-10058.094ENSMFAG00000037532GTPBP29160.870Macaca_fascicularis
ENSCSAVG00000011264-10058.094ENSMMUG00000008890GTPBP29161.067Macaca_mulatta
ENSCSAVG00000011264-10058.094ENSMNEG00000029284GTPBP29960.039Macaca_nemestrina
ENSCSAVG00000011264-10058.094ENSMLEG00000020440GTPBP28760.452Mandrillus_leucophaeus
ENSCSAVG00000011264-10057.014ENSMAMG00000021180-8759.211Mastacembelus_armatus
ENSCSAVG00000011264-10057.734ENSMAMG00000018933gtpbp2b8859.007Mastacembelus_armatus
ENSCSAVG00000011264-10057.374ENSMZEG00005027582GTPBP28859.774Maylandia_zebra
ENSCSAVG00000011264-10057.554ENSMZEG00005014948gtpbp2b8660.190Maylandia_zebra
ENSCSAVG00000011264-9757.671ENSMGAG00000010916GTPBP29760.659Meleagris_gallopavo
ENSCSAVG00000011264-10057.734ENSMAUG00000011899Gtpbp28959.887Mesocricetus_auratus
ENSCSAVG00000011264-10057.914ENSMICG00000005049GTPBP29959.844Microcebus_murinus
ENSCSAVG00000011264-10057.914ENSMOCG00000014945Gtpbp28760.264Microtus_ochrogaster
ENSCSAVG00000011264-9857.326ENSMMOG00000018641gtpbp2b8958.564Mola_mola
ENSCSAVG00000011264-9956.239ENSMMOG00000010333-8758.835Mola_mola
ENSCSAVG00000011264-10058.273ENSMODG00000018959GTPBP29660.452Monodelphis_domestica
ENSCSAVG00000011264-9856.777ENSMALG00000015405GTPBP28759.134Monopterus_albus
ENSCSAVG00000011264-10057.914MGP_CAROLIEiJ_G0021659Gtpbp28760.264Mus_caroli
ENSCSAVG00000011264-10057.914ENSMUSG00000023952Gtpbp28760.264Mus_musculus
ENSCSAVG00000011264-10057.914MGP_PahariEiJ_G0020651Gtpbp28760.264Mus_pahari
ENSCSAVG00000011264-10057.914MGP_SPRETEiJ_G0022571Gtpbp28760.264Mus_spretus
ENSCSAVG00000011264-9557.467ENSMPUG00000012898GTPBP29959.844Mustela_putorius_furo
ENSCSAVG00000011264-10057.734ENSMLUG00000017753GTPBP28760.075Myotis_lucifugus
ENSCSAVG00000011264-10057.914ENSNGAG00000021674Gtpbp28760.264Nannospalax_galili
ENSCSAVG00000011264-10057.194ENSNBRG00000018152GTPBP28859.586Neolamprologus_brichardi
ENSCSAVG00000011264-10058.094ENSNLEG00000003909GTPBP29360.511Nomascus_leucogenys
ENSCSAVG00000011264-9957.942ENSMEUG00000011527GTPBP29760.075Notamacropus_eugenii
ENSCSAVG00000011264-9052.679ENSOPRG00000000150GTPBP26154.521Ochotona_princeps
ENSCSAVG00000011264-10057.914ENSODEG00000015979GTPBP28760.264Octodon_degus
ENSCSAVG00000011264-10057.168ENSONIG00000011595-8959.772Oreochromis_niloticus
ENSCSAVG00000011264-10057.014ENSONIG00000000337GTPBP28759.810Oreochromis_niloticus
ENSCSAVG00000011264-9958.123ENSOCUG00000005529GTPBP28760.264Oryctolagus_cuniculus
ENSCSAVG00000011264-10056.655ENSORLG00000006506-8559.351Oryzias_latipes
ENSCSAVG00000011264-10057.734ENSORLG00000000909gtpbp2b8660.190Oryzias_latipes
ENSCSAVG00000011264-10057.734ENSORLG00020017539gtpbp2b8760.000Oryzias_latipes_hni
ENSCSAVG00000011264-10056.475ENSORLG00020006973-8659.160Oryzias_latipes_hni
ENSCSAVG00000011264-10056.655ENSORLG00015011731-8659.351Oryzias_latipes_hsok
ENSCSAVG00000011264-10057.734ENSORLG00015016979gtpbp2b8760.000Oryzias_latipes_hsok
ENSCSAVG00000011264-10056.655ENSOMEG00000005661-8659.443Oryzias_melastigma
ENSCSAVG00000011264-10057.554ENSOMEG00000008753gtpbp2b8959.287Oryzias_melastigma
ENSCSAVG00000011264-10057.914ENSOGAG00000014246GTPBP28859.813Otolemur_garnettii
ENSCSAVG00000011264-10058.094ENSOARG00000007931GTPBP29160.452Ovis_aries
ENSCSAVG00000011264-9858.059ENSPPAG00000034475GTPBP29960.039Pan_paniscus
ENSCSAVG00000011264-10057.914ENSPPRG00000007313GTPBP28760.264Panthera_pardus
ENSCSAVG00000011264-10057.734ENSPTIG00000007044GTPBP29260.075Panthera_tigris_altaica
ENSCSAVG00000011264-10058.094ENSPTRG00000018206GTPBP29960.039Pan_troglodytes
ENSCSAVG00000011264-10058.094ENSPANG00000023626GTPBP28760.452Papio_anubis
ENSCSAVG00000011264-10058.094ENSPKIG00000021173GTPBP28760.687Paramormyrops_kingsleyae
ENSCSAVG00000011264-10058.813ENSPKIG00000004603-8860.487Paramormyrops_kingsleyae
ENSCSAVG00000011264-10058.094ENSPSIG00000013133GTPBP29360.687Pelodiscus_sinensis
ENSCSAVG00000011264-9653.223ENSPMGG00000016881-8852.823Periophthalmus_magnuspinnatus
ENSCSAVG00000011264-10057.914ENSPEMG00000021976Gtpbp28760.264Peromyscus_maniculatus_bairdii
ENSCSAVG00000011264-10057.500ENSPMAG00000008505gtpbp2b9660.038Petromyzon_marinus
ENSCSAVG00000011264-9858.059ENSPCIG00000028513GTPBP28760.377Phascolarctos_cinereus
ENSCSAVG00000011264-10056.631ENSPFOG00000014861GTPBP28759.125Poecilia_formosa
ENSCSAVG00000011264-10055.576ENSPFOG00000011879gtpbp2b8857.463Poecilia_formosa
ENSCSAVG00000011264-9856.593ENSPLAG00000006848gtpbp2b8758.364Poecilia_latipinna
ENSCSAVG00000011264-10056.631ENSPLAG00000021758GTPBP28758.178Poecilia_latipinna
ENSCSAVG00000011264-9854.762ENSPMEG00000024116gtpbp2b8656.506Poecilia_mexicana
ENSCSAVG00000011264-10056.631ENSPMEG00000019695GTPBP28559.125Poecilia_mexicana
ENSCSAVG00000011264-10056.835ENSPREG00000022774gtpbp2b8958.256Poecilia_reticulata
ENSCSAVG00000011264-10056.631ENSPREG00000015222GTPBP28758.364Poecilia_reticulata
ENSCSAVG00000011264-10058.094ENSPPYG00000017279GTPBP28760.452Pongo_abelii
ENSCSAVG00000011264-7268.116ENSPCAG00000005341GTPBP27068.116Procavia_capensis
ENSCSAVG00000011264-10057.914ENSPCOG00000013032GTPBP28961.000Propithecus_coquereli
ENSCSAVG00000011264-9052.679ENSPVAG00000005698GTPBP27754.487Pteropus_vampyrus
ENSCSAVG00000011264-9957.482ENSPNYG00000017823gtpbp2b9760.190Pundamilia_nyererei
ENSCSAVG00000011264-10057.374ENSPNYG00000006932GTPBP28859.774Pundamilia_nyererei
ENSCSAVG00000011264-10058.094ENSPNAG00000026706gtpbp2b8560.762Pygocentrus_nattereri
ENSCSAVG00000011264-9856.831ENSPNAG00000025128-8859.696Pygocentrus_nattereri
ENSCSAVG00000011264-10057.914ENSRNOG00000019332Gtpbp29261.034Rattus_norvegicus
ENSCSAVG00000011264-9758.178ENSRBIG00000029462GTPBP27861.233Rhinopithecus_bieti
ENSCSAVG00000011264-9958.303ENSRROG00000027613GTPBP29960.039Rhinopithecus_roxellana
ENSCSAVG00000011264-10058.094ENSSBOG00000033640GTPBP29960.039Saimiri_boliviensis_boliviensis
ENSCSAVG00000011264-9758.178ENSSHAG00000014862GTPBP28861.233Sarcophilus_harrisii
ENSCSAVG00000011264-9957.246ENSSFOG00015005497GTPBP28660.594Scleropages_formosus
ENSCSAVG00000011264-10057.014ENSSMAG00000020926gtpbp2b8659.501Scophthalmus_maximus
ENSCSAVG00000011264-10056.115ENSSMAG00000020653-8857.836Scophthalmus_maximus
ENSCSAVG00000011264-10057.734ENSSDUG00000018968gtpbp2b8660.115Seriola_dumerili
ENSCSAVG00000011264-10056.835ENSSDUG00000011533-8759.023Seriola_dumerili
ENSCSAVG00000011264-10056.835ENSSLDG00000025536GTPBP28759.023Seriola_lalandi_dorsalis
ENSCSAVG00000011264-10058.273ENSSPUG00000011642GTPBP28759.888Sphenodon_punctatus
ENSCSAVG00000011264-9057.769ENSSPAG00000017284gtpbp2b8560.924Stegastes_partitus
ENSCSAVG00000011264-10056.655ENSSPAG00000008019GTPBP28858.647Stegastes_partitus
ENSCSAVG00000011264-10057.914ENSSSCG00000001689GTPBP29959.844Sus_scrofa
ENSCSAVG00000011264-9857.770ENSTGUG00000009198GTPBP29860.728Taeniopygia_guttata
ENSCSAVG00000011264-9956.284ENSTRUG00000010665gtpbp2b8659.160Takifugu_rubripes
ENSCSAVG00000011264-10055.935ENSTRUG00000011961GTPBP28658.238Takifugu_rubripes
ENSCSAVG00000011264-10057.734ENSTNIG00000004743gtpbp2b8660.190Tetraodon_nigroviridis
ENSCSAVG00000011264-8853.456ENSTBEG00000002501GTPBP29651.935Tupaia_belangeri
ENSCSAVG00000011264-10057.914ENSTTRG00000006351GTPBP28760.264Tursiops_truncatus
ENSCSAVG00000011264-10057.734ENSUAMG00000013776GTPBP28959.887Ursus_americanus
ENSCSAVG00000011264-10057.914ENSVVUG00000029087GTPBP29460.075Vulpes_vulpes
ENSCSAVG00000011264-5473.684ENSXETG00000010888gtpbp26273.684Xenopus_tropicalis
ENSCSAVG00000011264-9954.182ENSXCOG00000000389GTPBP28655.948Xiphophorus_couchianus
ENSCSAVG00000011264-9856.593ENSXCOG00000011245gtpbp2b8758.364Xiphophorus_couchianus
ENSCSAVG00000011264-10056.835ENSXMAG00000013799gtpbp2b8958.256Xiphophorus_maculatus
ENSCSAVG00000011264-10056.452ENSXMAG00000010601GTPBP28658.178Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us