EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011282 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4230 bases
Position: chrreftig_64:489922-494151
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019214	RNase_P_p30	PF01876.16	9.6e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019421	-	945	-	ENSCSAVP00000019214	300 (aa)	-	H2ZNP8

Gene Model

Click here to download ENSCSAVG00000011282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011282	-	87	38.603	ENSG00000148688	RPP30	96	38.603	Homo_sapiens
ENSCSAVG00000011282	-	78	38.819	ENSAPOG00000023156	rpp30	91	35.036	Acanthochromis_polyacanthus
ENSCSAVG00000011282	-	80	39.516	ENSAMEG00000016776	RPP30	87	39.516	Ailuropoda_melanoleuca
ENSCSAVG00000011282	-	78	39.662	ENSACIG00000022810	rpp30	86	35.021	Amphilophus_citrinellus
ENSCSAVG00000011282	-	87	36.882	ENSAOCG00000016438	rpp30	85	36.882	Amphiprion_ocellaris
ENSCSAVG00000011282	-	87	36.882	ENSAPEG00000008697	rpp30	85	36.882	Amphiprion_percula
ENSCSAVG00000011282	-	83	41.833	ENSATEG00000015263	rpp30	87	41.833	Anabas_testudineus
ENSCSAVG00000011282	-	78	42.373	ENSAPLG00000009959	RPP30	95	42.373	Anas_platyrhynchos
ENSCSAVG00000011282	-	87	38.951	ENSACAG00000007996	RPP30	96	38.951	Anolis_carolinensis
ENSCSAVG00000011282	-	80	31.855	ENSANAG00000009439	RPP30	72	31.855	Aotus_nancymaae
ENSCSAVG00000011282	-	95	38.542	ENSACLG00000015389	-	97	38.542	Astatotilapia_calliptera
ENSCSAVG00000011282	-	92	33.696	ENSAMXG00000040653	rpp30	98	33.696	Astyanax_mexicanus
ENSCSAVG00000011282	-	80	39.516	ENSBTAG00000002973	RPP30	87	39.516	Bos_taurus
ENSCSAVG00000011282	-	86	39.033	ENSCJAG00000011045	RPP30	95	39.033	Callithrix_jacchus
ENSCSAVG00000011282	-	80	39.113	ENSCAFG00000031801	RPP30	87	39.113	Canis_familiaris
ENSCSAVG00000011282	-	80	39.113	ENSCAFG00020000258	RPP30	87	39.113	Canis_lupus_dingo
ENSCSAVG00000011282	-	80	39.256	ENSCHIG00000012901	RPP30	86	39.256	Capra_hircus
ENSCSAVG00000011282	-	75	40.693	ENSTSYG00000013903	RPP30	81	40.693	Carlito_syrichta
ENSCSAVG00000011282	-	80	40.496	ENSCPOG00000033174	RPP30	87	40.496	Cavia_porcellus
ENSCSAVG00000011282	-	80	39.919	ENSCCAG00000029514	RPP30	87	39.919	Cebus_capucinus
ENSCSAVG00000011282	-	87	38.235	ENSCATG00000042072	RPP30	96	38.235	Cercocebus_atys
ENSCSAVG00000011282	-	80	40.496	ENSCLAG00000008595	RPP30	87	40.496	Chinchilla_lanigera
ENSCSAVG00000011282	-	89	38.489	ENSCSAG00000006694	RPP30	98	38.489	Chlorocebus_sabaeus
ENSCSAVG00000011282	-	82	40.891	ENSCPBG00000026518	RPP30	89	40.891	Chrysemys_picta_bellii
ENSCSAVG00000011282	-	88	73.004	ENSCING00000019714	-	97	73.004	Ciona_intestinalis
ENSCSAVG00000011282	-	89	38.489	ENSCANG00000041084	RPP30	98	38.489	Colobus_angolensis_palliatus
ENSCSAVG00000011282	-	54	41.718	ENSCGRG00001000834	-	63	41.718	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011282	-	78	38.430	ENSCGRG00001017068	-	95	38.430	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011282	-	54	41.718	ENSCGRG00000006196	-	63	41.718	Cricetulus_griseus_crigri
ENSCSAVG00000011282	-	80	39.516	ENSCGRG00000002508	-	87	39.516	Cricetulus_griseus_crigri
ENSCSAVG00000011282	-	95	34.965	ENSCSEG00000001779	rpp30	91	34.965	Cynoglossus_semilaevis
ENSCSAVG00000011282	-	83	38.956	ENSCVAG00000003139	rpp30	92	38.521	Cyprinodon_variegatus
ENSCSAVG00000011282	-	87	38.951	ENSDARG00000027428	rpp30	95	38.951	Danio_rerio
ENSCSAVG00000011282	-	82	37.931	ENSDNOG00000010186	RPP30	85	37.931	Dasypus_novemcinctus
ENSCSAVG00000011282	-	80	40.323	ENSDORG00000015333	Rpp30	87	40.323	Dipodomys_ordii
ENSCSAVG00000011282	-	95	31.633	FBgn0283652	Rpp30	91	31.633	Drosophila_melanogaster
ENSCSAVG00000011282	-	77	39.662	ENSETEG00000018823	RPP30	83	39.662	Echinops_telfairi
ENSCSAVG00000011282	-	80	40.909	ENSEASG00005011050	RPP30	87	40.909	Equus_asinus_asinus
ENSCSAVG00000011282	-	80	41.322	ENSECAG00000021917	RPP30	87	41.322	Equus_caballus
ENSCSAVG00000011282	-	54	34.356	ENSEEUG00000009986	-	62	34.356	Erinaceus_europaeus
ENSCSAVG00000011282	-	87	37.828	ENSELUG00000003731	rpp30	91	37.828	Esox_lucius
ENSCSAVG00000011282	-	80	39.919	ENSFCAG00000029073	RPP30	81	39.919	Felis_catus
ENSCSAVG00000011282	-	86	39.922	ENSFALG00000007711	RPP30	93	39.922	Ficedula_albicollis
ENSCSAVG00000011282	-	80	41.322	ENSFDAG00000019241	RPP30	87	41.322	Fukomys_damarensis
ENSCSAVG00000011282	-	84	37.743	ENSFHEG00000014739	rpp30	89	37.931	Fundulus_heteroclitus
ENSCSAVG00000011282	-	82	38.492	ENSGMOG00000005379	rpp30	97	38.492	Gadus_morhua
ENSCSAVG00000011282	-	86	40.541	ENSGALG00000006486	RPP30	90	53.153	Gallus_gallus
ENSCSAVG00000011282	-	84	37.549	ENSGAFG00000001445	rpp30	90	37.549	Gambusia_affinis
ENSCSAVG00000011282	-	95	36.577	ENSGACG00000010285	rpp30	97	36.577	Gasterosteus_aculeatus
ENSCSAVG00000011282	-	86	39.922	ENSGAGG00000000980	RPP30	65	39.922	Gopherus_agassizii
ENSCSAVG00000011282	-	87	38.971	ENSGGOG00000026917	RPP30	96	38.971	Gorilla_gorilla
ENSCSAVG00000011282	-	95	37.847	ENSHBUG00000019332	rpp30	97	37.847	Haplochromis_burtoni
ENSCSAVG00000011282	-	80	40.909	ENSHGLG00000013072	RPP30	87	40.909	Heterocephalus_glaber_female
ENSCSAVG00000011282	-	80	40.909	ENSHGLG00100017798	RPP30	87	40.909	Heterocephalus_glaber_male
ENSCSAVG00000011282	-	87	36.260	ENSHCOG00000004763	-	89	36.260	Hippocampus_comes
ENSCSAVG00000011282	-	87	35.741	ENSIPUG00000003863	rpp30	92	35.741	Ictalurus_punctatus
ENSCSAVG00000011282	-	80	40.083	ENSSTOG00000027002	RPP30	87	40.083	Ictidomys_tridecemlineatus
ENSCSAVG00000011282	-	80	40.323	ENSJJAG00000020041	Rpp30	87	40.323	Jaculus_jaculus
ENSCSAVG00000011282	-	95	37.762	ENSKMAG00000015355	rpp30	97	37.762	Kryptolebias_marmoratus
ENSCSAVG00000011282	-	87	39.231	ENSLBEG00000019989	rpp30	92	39.231	Labrus_bergylta
ENSCSAVG00000011282	-	86	35.249	ENSLOCG00000000031	rpp30	94	35.249	Lepisosteus_oculatus
ENSCSAVG00000011282	-	80	39.516	ENSLAFG00000015931	RPP30	87	39.516	Loxodonta_africana
ENSCSAVG00000011282	-	89	38.489	ENSMFAG00000031109	RPP30	98	43.902	Macaca_fascicularis
ENSCSAVG00000011282	-	89	38.489	ENSMMUG00000006628	RPP30	98	38.489	Macaca_mulatta
ENSCSAVG00000011282	-	89	38.129	ENSMNEG00000033838	RPP30	98	38.129	Macaca_nemestrina
ENSCSAVG00000011282	-	89	38.489	ENSMLEG00000037578	RPP30	98	38.489	Mandrillus_leucophaeus
ENSCSAVG00000011282	-	95	37.063	ENSMAMG00000010934	rpp30	97	37.063	Mastacembelus_armatus
ENSCSAVG00000011282	-	95	38.889	ENSMZEG00005018508	-	97	38.889	Maylandia_zebra
ENSCSAVG00000011282	-	86	36.680	ENSMGAG00000008452	RPP30	94	36.680	Meleagris_gallopavo
ENSCSAVG00000011282	-	80	40.323	ENSMAUG00000008797	Rpp30	87	40.323	Mesocricetus_auratus
ENSCSAVG00000011282	-	80	39.516	ENSMICG00000012019	RPP30	87	39.516	Microcebus_murinus
ENSCSAVG00000011282	-	80	39.516	ENSMOCG00000016872	Rpp30	87	39.516	Microtus_ochrogaster
ENSCSAVG00000011282	-	83	37.849	ENSMMOG00000009266	rpp30	88	37.849	Mola_mola
ENSCSAVG00000011282	-	83	34.400	ENSMODG00000009342	-	89	34.400	Monodelphis_domestica
ENSCSAVG00000011282	-	83	39.600	ENSMODG00000006863	-	90	39.600	Monodelphis_domestica
ENSCSAVG00000011282	-	84	38.976	ENSMALG00000011718	rpp30	90	38.976	Monopterus_albus
ENSCSAVG00000011282	-	80	40.323	MGP_CAROLIEiJ_G0022902	Rpp30	87	40.323	Mus_caroli
ENSCSAVG00000011282	-	80	40.323	ENSMUSG00000024800	Rpp30	87	40.323	Mus_musculus
ENSCSAVG00000011282	-	86	38.951	MGP_PahariEiJ_G0014397	Rpp30	94	38.951	Mus_pahari
ENSCSAVG00000011282	-	80	40.909	MGP_SPRETEiJ_G0023821	Rpp30	87	40.909	Mus_spretus
ENSCSAVG00000011282	-	80	39.516	ENSMPUG00000017258	RPP30	81	39.516	Mustela_putorius_furo
ENSCSAVG00000011282	-	87	37.868	ENSMLUG00000017169	RPP30	96	37.868	Myotis_lucifugus
ENSCSAVG00000011282	-	80	39.113	ENSNGAG00000012018	-	87	39.113	Nannospalax_galili
ENSCSAVG00000011282	-	58	39.080	ENSNBRG00000024170	-	65	39.080	Neolamprologus_brichardi
ENSCSAVG00000011282	-	87	38.971	ENSNLEG00000012383	RPP30	96	38.971	Nomascus_leucogenys
ENSCSAVG00000011282	-	77	30.472	ENSODEG00000004560	-	83	30.472	Octodon_degus
ENSCSAVG00000011282	-	80	39.919	ENSODEG00000004530	-	89	39.919	Octodon_degus
ENSCSAVG00000011282	-	70	41.232	ENSONIG00000019140	rpp30	98	40.566	Oreochromis_niloticus
ENSCSAVG00000011282	-	80	41.322	ENSOANG00000003415	RPP30	87	41.322	Ornithorhynchus_anatinus
ENSCSAVG00000011282	-	82	39.080	ENSOCUG00000006896	RPP30	85	39.080	Oryctolagus_cuniculus
ENSCSAVG00000011282	-	95	36.519	ENSORLG00000020420	rpp30	98	36.519	Oryzias_latipes
ENSCSAVG00000011282	-	86	39.147	ENSORLG00020009037	-	93	39.147	Oryzias_latipes_hni
ENSCSAVG00000011282	-	86	39.147	ENSORLG00015008300	rpp30	87	39.147	Oryzias_latipes_hsok
ENSCSAVG00000011282	-	62	36.559	ENSOMEG00000012640	-	96	36.559	Oryzias_melastigma
ENSCSAVG00000011282	-	80	40.323	ENSOGAG00000013963	RPP30	87	40.323	Otolemur_garnettii
ENSCSAVG00000011282	-	73	40.000	ENSOARG00000015789	RPP30	79	40.000	Ovis_aries
ENSCSAVG00000011282	-	87	38.603	ENSPPAG00000043779	RPP30	96	38.603	Pan_paniscus
ENSCSAVG00000011282	-	80	39.919	ENSPPRG00000000115	RPP30	87	39.919	Panthera_pardus
ENSCSAVG00000011282	-	80	39.919	ENSPTIG00000014949	RPP30	87	39.919	Panthera_tigris_altaica
ENSCSAVG00000011282	-	87	38.603	ENSPTRG00000002742	RPP30	96	36.765	Pan_troglodytes
ENSCSAVG00000011282	-	89	38.489	ENSPANG00000021710	RPP30	98	38.489	Papio_anubis
ENSCSAVG00000011282	-	78	39.496	ENSPSIG00000013213	RPP30	95	39.496	Pelodiscus_sinensis
ENSCSAVG00000011282	-	78	33.051	ENSPMGG00000014872	rpp30	90	33.051	Periophthalmus_magnuspinnatus
ENSCSAVG00000011282	-	54	41.718	ENSPEMG00000001948	Rpp30	61	41.718	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011282	-	83	40.000	ENSPCIG00000015730	RPP30	90	40.000	Phascolarctos_cinereus
ENSCSAVG00000011282	-	83	38.710	ENSPFOG00000000610	rpp30	89	38.710	Poecilia_formosa
ENSCSAVG00000011282	-	77	39.394	ENSPLAG00000003728	rpp30	78	39.394	Poecilia_latipinna
ENSCSAVG00000011282	-	83	39.200	ENSPMEG00000015692	rpp30	89	39.200	Poecilia_mexicana
ENSCSAVG00000011282	-	83	38.710	ENSPREG00000001536	rpp30	89	38.710	Poecilia_reticulata
ENSCSAVG00000011282	-	80	40.726	ENSPPYG00000002473	RPP30	87	40.726	Pongo_abelii
ENSCSAVG00000011282	-	80	39.516	ENSPCOG00000017865	RPP30	87	39.516	Propithecus_coquereli
ENSCSAVG00000011282	-	73	40.444	ENSPVAG00000010524	RPP30	69	40.444	Pteropus_vampyrus
ENSCSAVG00000011282	-	58	39.429	ENSPNYG00000016930	-	59	39.429	Pundamilia_nyererei
ENSCSAVG00000011282	-	91	36.000	ENSPNAG00000014804	rpp30	98	36.000	Pygocentrus_nattereri
ENSCSAVG00000011282	-	87	38.951	ENSRNOG00000018718	Rpp30	94	38.951	Rattus_norvegicus
ENSCSAVG00000011282	-	87	36.029	ENSRBIG00000036948	RPP30	83	36.029	Rhinopithecus_bieti
ENSCSAVG00000011282	-	54	45.732	ENSSBOG00000025405	RPP30	56	45.732	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011282	-	83	38.889	ENSSHAG00000007452	RPP30	90	38.889	Sarcophilus_harrisii
ENSCSAVG00000011282	-	93	35.714	ENSSFOG00015012510	rpp30	94	35.714	Scleropages_formosus
ENSCSAVG00000011282	-	87	38.783	ENSSMAG00000013854	rpp30	92	38.783	Scophthalmus_maximus
ENSCSAVG00000011282	-	87	39.623	ENSSDUG00000015086	rpp30	93	39.623	Seriola_dumerili
ENSCSAVG00000011282	-	60	41.530	ENSSLDG00000021234	rpp30	73	41.530	Seriola_lalandi_dorsalis
ENSCSAVG00000011282	-	80	40.726	ENSSARG00000007110	RPP30	87	40.726	Sorex_araneus
ENSCSAVG00000011282	-	59	45.556	ENSSPUG00000000595	RPP30	86	48.113	Sphenodon_punctatus
ENSCSAVG00000011282	-	80	40.323	ENSSSCG00000010460	RPP30	87	40.323	Sus_scrofa
ENSCSAVG00000011282	-	80	39.834	ENSTGUG00000008399	RPP30	93	39.834	Taeniopygia_guttata
ENSCSAVG00000011282	-	83	41.406	ENSTNIG00000018540	rpp30	86	41.406	Tetraodon_nigroviridis
ENSCSAVG00000011282	-	60	45.652	ENSTBEG00000010734	RPP30	83	45.652	Tupaia_belangeri
ENSCSAVG00000011282	-	62	34.715	ENSUAMG00000001045	RPP30	87	34.715	Ursus_americanus
ENSCSAVG00000011282	-	80	39.516	ENSUMAG00000000971	RPP30	87	39.516	Ursus_maritimus
ENSCSAVG00000011282	-	80	37.190	ENSVVUG00000021784	RPP30	86	37.190	Vulpes_vulpes
ENSCSAVG00000011282	-	60	48.087	ENSXETG00000021785	rpp30	68	48.087	Xenopus_tropicalis
ENSCSAVG00000011282	-	84	39.921	ENSXCOG00000017864	rpp30	90	39.921	Xiphophorus_couchianus