EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000011294 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7569 bases
Position: chrreftig_64:521936-529504
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019232	MTS	PF05175.14	2.5e-07	1	1
ENSCSAVP00000019232	Methyltransf_31	PF13847.6	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019440	-	850	-	ENSCSAVP00000019232	221 (aa)	-	H2ZNR6

Gene Model

Click here to download ENSCSAVG00000011294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000011294	-	100	94.118	ENSCSAVG00000011293	-	100	94.118
ENSCSAVG00000011294	-	100	72.072	ENSCSAVG00000011296	-	100	72.072
ENSCSAVG00000011294	-	95	74.286	ENSCSAVG00000005814	-	100	74.286
ENSCSAVG00000011294	-	76	64.497	ENSCSAVG00000007262	-	91	64.497
ENSCSAVG00000011294	-	96	60.094	ENSCSAVG00000004321	-	96	60.094

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011294	-	99	52.727	ENSCING00000021159	-	99	52.727	Ciona_intestinalis