EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000011296 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2122 bases
Position: chrreftig_64:558861-560982
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019235	MTS	PF05175.14	5.4e-06	1	1
ENSCSAVP00000019235	Methyltransf_31	PF13847.6	5.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019443	-	686	-	ENSCSAVP00000019235	222 (aa)	-	H2ZNR9

Gene Model

Click here to download ENSCSAVG00000011296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000011296	-	65	30.137	ENSCSAVG00000006531	-	65	30.137
ENSCSAVG00000011296	-	100	74.324	ENSCSAVG00000011293	-	100	74.324
ENSCSAVG00000011296	-	78	57.803	ENSCSAVG00000007262	-	94	57.803
ENSCSAVG00000011296	-	100	72.072	ENSCSAVG00000011294	-	100	72.072
ENSCSAVG00000011296	-	72	30.303	ENSCSAVG00000004347	-	75	30.303
ENSCSAVG00000011296	-	99	59.361	ENSCSAVG00000004321	-	99	59.361
ENSCSAVG00000011296	-	95	95.238	ENSCSAVG00000005814	-	100	95.238
ENSCSAVG00000011296	-	73	30.723	ENSCSAVG00000003331	-	66	30.723

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011296	-	99	53.425	ENSCING00000021159	-	99	53.425	Ciona_intestinalis
ENSCSAVG00000011296	-	64	30.282	ENSCING00000003740	-	69	30.282	Ciona_intestinalis