EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011462 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1484 bases
Position: chrreftig_16:4212319-4213802
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019546	RF-1	PF00472.20	1.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019758	-	678	-	ENSCSAVP00000019546	205 (aa)	-	H2ZPN0

Gene Model

Click here to download ENSCSAVG00000011462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011462	-	82	40.462	ENSG00000167862	MRPL58	73	43.448	Homo_sapiens
ENSCSAVG00000011462	-	85	41.143	ENSAMEG00000009104	MRPL58	67	45.714	Ailuropoda_melanoleuca
ENSCSAVG00000011462	-	62	45.669	ENSACIG00000019303	MRPL58	54	50.000	Amphilophus_citrinellus
ENSCSAVG00000011462	-	82	41.618	ENSANAG00000023857	MRPL58	72	46.377	Aotus_nancymaae
ENSCSAVG00000011462	-	89	39.267	ENSBTAG00000003303	MRPL58	88	39.267	Bos_taurus
ENSCSAVG00000011462	-	82	41.176	ENSCJAG00000047013	MRPL58	65	45.926	Callithrix_jacchus
ENSCSAVG00000011462	-	69	40.559	ENSCAFG00000004699	MRPL58	71	45.370	Canis_familiaris
ENSCSAVG00000011462	-	82	39.412	ENSCAFG00020021889	MRPL58	65	42.963	Canis_lupus_dingo
ENSCSAVG00000011462	-	89	38.710	ENSCHIG00000018213	MRPL58	72	41.722	Capra_hircus
ENSCSAVG00000011462	-	83	37.143	ENSTSYG00000013235	MRPL58	69	39.310	Carlito_syrichta
ENSCSAVG00000011462	-	62	46.094	ENSCAPG00000009003	MRPL58	65	52.688	Cavia_aperea
ENSCSAVG00000011462	-	82	38.824	ENSCPOG00000033171	MRPL58	65	43.704	Cavia_porcellus
ENSCSAVG00000011462	-	83	41.520	ENSCCAG00000035029	MRPL58	65	45.926	Cebus_capucinus
ENSCSAVG00000011462	-	82	41.573	ENSCATG00000039315	MRPL58	68	44.521	Cercocebus_atys
ENSCSAVG00000011462	-	85	38.857	ENSCLAG00000002475	MRPL58	67	42.143	Chinchilla_lanigera
ENSCSAVG00000011462	-	82	41.243	ENSCSAG00000004656	MRPL58	68	44.138	Chlorocebus_sabaeus
ENSCSAVG00000011462	-	82	36.471	ENSCHOG00000003849	-	64	38.406	Choloepus_hoffmanni
ENSCSAVG00000011462	-	82	39.181	ENSCPBG00000028141	MRPL58	65	41.912	Chrysemys_picta_bellii
ENSCSAVG00000011462	-	96	77.500	ENSCING00000022971	-	99	77.500	Ciona_intestinalis
ENSCSAVG00000011462	-	82	40.230	ENSCANG00000042071	MRPL58	66	42.958	Colobus_angolensis_palliatus
ENSCSAVG00000011462	-	85	37.714	ENSCGRG00001023339	Mrpl58	67	41.429	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011462	-	85	37.714	ENSCGRG00000007240	Mrpl58	69	41.429	Cricetulus_griseus_crigri
ENSCSAVG00000011462	-	82	41.176	ENSDNOG00000013172	MRPL58	66	44.928	Dasypus_novemcinctus
ENSCSAVG00000011462	-	82	40.230	ENSDORG00000006439	Mrpl58	63	42.963	Dipodomys_ordii
ENSCSAVG00000011462	-	72	32.667	FBgn0032261	CG6094	73	32.667	Drosophila_melanogaster
ENSCSAVG00000011462	-	87	39.247	ENSETEG00000010502	MRPL58	72	41.060	Echinops_telfairi
ENSCSAVG00000011462	-	62	38.168	ENSEBUG00000001979	MRPL58	59	43.000	Eptatretus_burgeri
ENSCSAVG00000011462	-	63	46.154	ENSEASG00005000272	MRPL58	62	41.611	Equus_asinus_asinus
ENSCSAVG00000011462	-	82	41.176	ENSECAG00000013418	MRPL58	70	41.497	Equus_caballus
ENSCSAVG00000011462	-	82	37.647	ENSEEUG00000013113	MRPL58	68	41.549	Erinaceus_europaeus
ENSCSAVG00000011462	-	85	40.000	ENSFCAG00000035293	MRPL58	68	43.357	Felis_catus
ENSCSAVG00000011462	-	82	43.103	ENSFDAG00000005635	MRPL58	68	45.775	Fukomys_damarensis
ENSCSAVG00000011462	-	89	40.107	ENSGALG00000007822	MRPL58	82	41.463	Gallus_gallus
ENSCSAVG00000011462	-	74	41.447	ENSGAFG00000000639	MRPL58	60	43.802	Gambusia_affinis
ENSCSAVG00000011462	-	65	41.912	ENSGAGG00000003969	MRPL58	69	41.912	Gopherus_agassizii
ENSCSAVG00000011462	-	82	39.412	ENSGGOG00000012341	MRPL58	62	44.444	Gorilla_gorilla
ENSCSAVG00000011462	-	88	39.894	ENSHGLG00000007782	ICT1	73	41.830	Heterocephalus_glaber_female
ENSCSAVG00000011462	-	88	39.894	ENSHGLG00100004722	ICT1	73	41.830	Heterocephalus_glaber_male
ENSCSAVG00000011462	-	82	42.529	ENSSTOG00000015149	MRPL58	68	45.070	Ictidomys_tridecemlineatus
ENSCSAVG00000011462	-	91	38.947	ENSJJAG00000000722	Mrpl58	78	41.358	Jaculus_jaculus
ENSCSAVG00000011462	-	82	43.529	ENSLACG00000008356	MRPL58	65	47.407	Latimeria_chalumnae
ENSCSAVG00000011462	-	86	41.111	ENSLOCG00000011474	MRPL58	71	44.521	Lepisosteus_oculatus
ENSCSAVG00000011462	-	82	40.000	ENSLAFG00000000272	MRPL58	80	40.000	Loxodonta_africana
ENSCSAVG00000011462	-	82	41.243	ENSMFAG00000023313	-	68	44.138	Macaca_fascicularis
ENSCSAVG00000011462	-	82	40.113	ENSMFAG00000019961	-	68	43.448	Macaca_fascicularis
ENSCSAVG00000011462	-	82	40.113	ENSMMUG00000011644	MRPL58	68	43.448	Macaca_mulatta
ENSCSAVG00000011462	-	82	40.678	ENSMNEG00000030999	MRPL58	68	43.448	Macaca_nemestrina
ENSCSAVG00000011462	-	63	44.697	ENSMLEG00000026116	-	71	44.697	Mandrillus_leucophaeus
ENSCSAVG00000011462	-	60	42.400	ENSMLEG00000035555	-	70	42.400	Mandrillus_leucophaeus
ENSCSAVG00000011462	-	61	48.062	ENSMGAG00000009312	MRPL58	77	51.887	Meleagris_gallopavo
ENSCSAVG00000011462	-	86	37.569	ENSMAUG00000014528	Mrpl58	68	41.096	Mesocricetus_auratus
ENSCSAVG00000011462	-	83	41.143	ENSMICG00000010640	MRPL58	68	44.056	Microcebus_murinus
ENSCSAVG00000011462	-	87	39.011	ENSMOCG00000015630	Mrpl58	70	41.096	Microtus_ochrogaster
ENSCSAVG00000011462	-	86	37.297	ENSMODG00000007126	MRPL58	73	40.523	Monodelphis_domestica
ENSCSAVG00000011462	-	72	39.189	ENSMALG00000011991	-	61	42.017	Monopterus_albus
ENSCSAVG00000011462	-	82	35.088	MGP_CAROLIEiJ_G0017400	Mrpl58	62	38.760	Mus_caroli
ENSCSAVG00000011462	-	86	36.464	ENSMUSG00000018858	Mrpl58	70	40.411	Mus_musculus
ENSCSAVG00000011462	-	87	36.559	MGP_PahariEiJ_G0018530	Mrpl58	72	38.411	Mus_pahari
ENSCSAVG00000011462	-	86	36.464	MGP_SPRETEiJ_G0018245	Mrpl58	70	40.411	Mus_spretus
ENSCSAVG00000011462	-	85	34.831	ENSMPUG00000014086	MRPL58	67	37.324	Mustela_putorius_furo
ENSCSAVG00000011462	-	69	42.657	ENSMLUG00000006752	MRPL58	58	48.571	Myotis_lucifugus
ENSCSAVG00000011462	-	91	39.691	ENSNGAG00000009226	Mrpl58	76	41.509	Nannospalax_galili
ENSCSAVG00000011462	-	64	44.275	ENSNBRG00000013694	MRPL58	52	48.000	Neolamprologus_brichardi
ENSCSAVG00000011462	-	87	36.559	ENSMEUG00000011411	MRPL58	73	38.961	Notamacropus_eugenii
ENSCSAVG00000011462	-	96	39.901	ENSOPRG00000001655	-	70	43.624	Ochotona_princeps
ENSCSAVG00000011462	-	82	40.462	ENSODEG00000010192	MRPL58	64	45.652	Octodon_degus
ENSCSAVG00000011462	-	61	42.063	ENSOANG00000007032	-	62	49.462	Ornithorhynchus_anatinus
ENSCSAVG00000011462	-	85	40.571	ENSOCUG00000000800	MRPL58	70	44.286	Oryctolagus_cuniculus
ENSCSAVG00000011462	-	82	41.176	ENSOGAG00000003555	MRPL58	65	46.667	Otolemur_garnettii
ENSCSAVG00000011462	-	82	40.462	ENSPPAG00000032239	MRPL58	65	45.652	Pan_paniscus
ENSCSAVG00000011462	-	85	39.429	ENSPPRG00000008418	MRPL58	68	42.657	Panthera_pardus
ENSCSAVG00000011462	-	69	41.259	ENSPTIG00000014767	MRPL58	52	52.083	Panthera_tigris_altaica
ENSCSAVG00000011462	-	82	40.462	ENSPTRG00000009627	MRPL58	65	45.652	Pan_troglodytes
ENSCSAVG00000011462	-	62	44.697	ENSPANG00000032491	-	60	52.874	Papio_anubis
ENSCSAVG00000011462	-	82	40.678	ENSPANG00000000142	-	68	43.448	Papio_anubis
ENSCSAVG00000011462	-	82	37.647	ENSPSIG00000004736	MRPL58	65	42.222	Pelodiscus_sinensis
ENSCSAVG00000011462	-	87	37.500	ENSPEMG00000003138	Mrpl58	71	40.940	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011462	-	87	37.634	ENSPCIG00000004667	MRPL58	73	41.176	Phascolarctos_cinereus
ENSCSAVG00000011462	-	74	38.816	ENSPFOG00000018595	MRPL58	61	40.496	Poecilia_formosa
ENSCSAVG00000011462	-	74	39.474	ENSPLAG00000016858	MRPL58	60	41.322	Poecilia_latipinna
ENSCSAVG00000011462	-	62	43.307	ENSPMEG00000012976	MRPL58	69	46.875	Poecilia_mexicana
ENSCSAVG00000011462	-	82	42.373	ENSPPYG00000008614	MRPL58	68	45.517	Pongo_abelii
ENSCSAVG00000011462	-	82	39.412	ENSPCAG00000015297	MRPL58	80	39.412	Procavia_capensis
ENSCSAVG00000011462	-	83	41.714	ENSPCOG00000004300	MRPL58	68	44.755	Propithecus_coquereli
ENSCSAVG00000011462	-	82	39.412	ENSPVAG00000016063	MRPL58	66	42.029	Pteropus_vampyrus
ENSCSAVG00000011462	-	64	45.038	ENSPNYG00000007275	MRPL58	52	48.000	Pundamilia_nyererei
ENSCSAVG00000011462	-	87	37.097	ENSRNOG00000032780	Mrpl58	72	39.073	Rattus_norvegicus
ENSCSAVG00000011462	-	63	43.284	ENSRBIG00000033109	MRPL58	68	42.857	Rhinopithecus_bieti
ENSCSAVG00000011462	-	82	38.462	ENSRROG00000006234	-	72	41.060	Rhinopithecus_roxellana
ENSCSAVG00000011462	-	82	40.805	ENSRROG00000010716	-	76	41.139	Rhinopithecus_roxellana
ENSCSAVG00000011462	-	82	40.000	ENSSBOG00000036182	MRPL58	65	44.444	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011462	-	87	37.634	ENSSHAG00000018724	MRPL58	73	40.909	Sarcophilus_harrisii
ENSCSAVG00000011462	-	86	36.364	ENSSMAG00000003640	-	72	37.931	Scophthalmus_maximus
ENSCSAVG00000011462	-	91	35.829	ENSSPUG00000009563	MRPL58	70	39.860	Sphenodon_punctatus
ENSCSAVG00000011462	-	82	41.765	ENSSSCG00000034406	MRPL58	61	46.094	Sus_scrofa
ENSCSAVG00000011462	-	86	37.634	ENSTGUG00000008783	MRPL58	81	41.060	Taeniopygia_guttata
ENSCSAVG00000011462	-	81	36.145	ENSTRUG00000021467	MRPL58	64	38.519	Takifugu_rubripes
ENSCSAVG00000011462	-	85	41.143	ENSUAMG00000010472	MRPL58	65	46.667	Ursus_americanus
ENSCSAVG00000011462	-	62	44.531	ENSVPAG00000002667	MRPL58	66	53.488	Vicugna_pacos
ENSCSAVG00000011462	-	82	40.588	ENSVVUG00000011117	MRPL58	65	42.963	Vulpes_vulpes
ENSCSAVG00000011462	-	81	40.351	ENSXETG00000012505	mrpl58	66	42.636	Xenopus_tropicalis
ENSCSAVG00000011462	-	62	44.531	ENSXCOG00000002727	MRPL58	57	47.423	Xiphophorus_couchianus