EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011477 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1689 bases
Position: chrreftig_1:4703466-4705154
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019583	Ribosomal_L27	PF01016.19	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019795	-	629	-	ENSCSAVP00000019583	154 (aa)	-	H2ZPR7

Gene Model

Click here to download ENSCSAVG00000011477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011477	-	71	46.018	ENSG00000108826	MRPL27	97	48.352	Homo_sapiens
ENSCSAVG00000011477	-	94	39.865	ENSAPOG00000000462	mrpl27	93	39.865	Acanthochromis_polyacanthus
ENSCSAVG00000011477	-	71	43.363	ENSAMEG00000011876	MRPL27	74	43.363	Ailuropoda_melanoleuca
ENSCSAVG00000011477	-	73	43.103	ENSACIG00000023215	mrpl27	78	43.103	Amphilophus_citrinellus
ENSCSAVG00000011477	-	95	37.333	ENSAOCG00000005820	mrpl27	97	37.333	Amphiprion_ocellaris
ENSCSAVG00000011477	-	95	36.667	ENSAPEG00000018214	mrpl27	97	36.667	Amphiprion_percula
ENSCSAVG00000011477	-	73	43.966	ENSATEG00000023863	mrpl27	76	43.966	Anabas_testudineus
ENSCSAVG00000011477	-	71	45.614	ENSACAG00000005266	MRPL27	74	45.614	Anolis_carolinensis
ENSCSAVG00000011477	-	71	43.363	ENSANAG00000007800	MRPL27	74	43.363	Aotus_nancymaae
ENSCSAVG00000011477	-	95	40.667	ENSACLG00000024891	mrpl27	97	40.667	Astatotilapia_calliptera
ENSCSAVG00000011477	-	71	46.018	ENSBTAG00000021720	MRPL27	74	46.018	Bos_taurus
ENSCSAVG00000011477	-	87	38.406	ENSCJAG00000023356	-	91	38.406	Callithrix_jacchus
ENSCSAVG00000011477	-	87	39.130	ENSCJAG00000018851	-	91	39.130	Callithrix_jacchus
ENSCSAVG00000011477	-	87	37.681	ENSCJAG00000043312	-	92	37.681	Callithrix_jacchus
ENSCSAVG00000011477	-	71	40.000	ENSCJAG00000023088	-	68	40.000	Callithrix_jacchus
ENSCSAVG00000011477	-	71	47.788	ENSCAFG00000017031	MRPL27	73	47.788	Canis_familiaris
ENSCSAVG00000011477	-	71	47.788	ENSCAFG00020023525	-	90	41.379	Canis_lupus_dingo
ENSCSAVG00000011477	-	71	41.593	ENSCAFG00020025985	-	71	41.593	Canis_lupus_dingo
ENSCSAVG00000011477	-	87	41.304	ENSCHIG00000007881	MRPL27	91	41.304	Capra_hircus
ENSCSAVG00000011477	-	71	45.133	ENSTSYG00000012176	MRPL27	74	45.133	Carlito_syrichta
ENSCSAVG00000011477	-	84	42.143	ENSCAPG00000012767	MRPL27	94	42.143	Cavia_aperea
ENSCSAVG00000011477	-	81	42.222	ENSCPOG00000025999	MRPL27	89	42.222	Cavia_porcellus
ENSCSAVG00000011477	-	71	44.248	ENSCCAG00000027809	-	74	44.248	Cebus_capucinus
ENSCSAVG00000011477	-	71	36.364	ENSCCAG00000026459	-	85	36.364	Cebus_capucinus
ENSCSAVG00000011477	-	87	38.406	ENSCATG00000028901	MRPL27	91	38.406	Cercocebus_atys
ENSCSAVG00000011477	-	71	44.248	ENSCLAG00000012478	MRPL27	74	44.248	Chinchilla_lanigera
ENSCSAVG00000011477	-	87	38.406	ENSCSAG00000005396	MRPL27	91	38.406	Chlorocebus_sabaeus
ENSCSAVG00000011477	-	71	43.636	ENSCHOG00000005103	MRPL27	69	43.636	Choloepus_hoffmanni
ENSCSAVG00000011477	-	71	48.649	ENSCPBG00000028179	MRPL27	78	48.649	Chrysemys_picta_bellii
ENSCSAVG00000011477	-	87	38.406	ENSCANG00000034874	MRPL27	97	46.154	Colobus_angolensis_palliatus
ENSCSAVG00000011477	-	71	45.455	ENSCGRG00001018944	Mrpl27	69	45.455	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011477	-	71	44.545	ENSCGRG00000002582	-	74	44.545	Cricetulus_griseus_crigri
ENSCSAVG00000011477	-	71	36.697	ENSCGRG00000008284	-	79	36.697	Cricetulus_griseus_crigri
ENSCSAVG00000011477	-	73	40.708	ENSCSEG00000002853	mrpl27	76	40.708	Cynoglossus_semilaevis
ENSCSAVG00000011477	-	73	43.590	ENSDARG00000032985	mrpl27	77	43.590	Danio_rerio
ENSCSAVG00000011477	-	71	46.018	ENSDNOG00000023845	MRPL27	74	46.018	Dasypus_novemcinctus
ENSCSAVG00000011477	-	56	46.591	ENSDORG00000001026	Mrpl27	92	46.591	Dipodomys_ordii
ENSCSAVG00000011477	-	71	38.739	ENSETEG00000004969	-	92	38.739	Echinops_telfairi
ENSCSAVG00000011477	-	71	43.243	ENSETEG00000014252	-	74	43.243	Echinops_telfairi
ENSCSAVG00000011477	-	71	47.788	ENSEASG00005018616	MRPL27	75	47.788	Equus_asinus_asinus
ENSCSAVG00000011477	-	71	47.788	ENSECAG00000016779	MRPL27	75	47.788	Equus_caballus
ENSCSAVG00000011477	-	51	44.304	ENSEEUG00000010178	-	73	44.304	Erinaceus_europaeus
ENSCSAVG00000011477	-	60	40.860	ENSEEUG00000011738	-	70	40.860	Erinaceus_europaeus
ENSCSAVG00000011477	-	71	46.429	ENSEEUG00000010549	-	74	46.429	Erinaceus_europaeus
ENSCSAVG00000011477	-	71	40.909	ENSELUG00000023147	mrpl27	81	40.909	Esox_lucius
ENSCSAVG00000011477	-	87	40.000	ENSFCAG00000037928	MRPL27	74	46.018	Felis_catus
ENSCSAVG00000011477	-	82	44.186	ENSFALG00000001307	MRPL27	84	44.186	Ficedula_albicollis
ENSCSAVG00000011477	-	71	45.133	ENSFDAG00000018359	MRPL27	74	45.133	Fukomys_damarensis
ENSCSAVG00000011477	-	73	45.690	ENSFHEG00000007108	mrpl27	76	45.690	Fundulus_heteroclitus
ENSCSAVG00000011477	-	73	43.363	ENSGMOG00000000545	mrpl27	76	43.363	Gadus_morhua
ENSCSAVG00000011477	-	71	46.847	ENSGALG00000038812	MRPL27	78	46.847	Gallus_gallus
ENSCSAVG00000011477	-	73	44.737	ENSGACG00000015241	mrpl27	76	44.737	Gasterosteus_aculeatus
ENSCSAVG00000011477	-	71	45.133	ENSGGOG00000011954	MRPL27	97	47.253	Gorilla_gorilla
ENSCSAVG00000011477	-	95	40.667	ENSHBUG00000019735	mrpl27	97	40.667	Haplochromis_burtoni
ENSCSAVG00000011477	-	71	43.363	ENSHGLG00000016030	MRPL27	74	43.363	Heterocephalus_glaber_female
ENSCSAVG00000011477	-	71	43.363	ENSHGLG00100019037	MRPL27	74	43.363	Heterocephalus_glaber_male
ENSCSAVG00000011477	-	73	39.474	ENSHCOG00000002137	mrpl27	81	39.474	Hippocampus_comes
ENSCSAVG00000011477	-	73	45.614	ENSIPUG00000003799	mrpl27	76	45.614	Ictalurus_punctatus
ENSCSAVG00000011477	-	87	40.000	ENSSTOG00000008896	MRPL27	91	40.000	Ictidomys_tridecemlineatus
ENSCSAVG00000011477	-	88	40.940	ENSJJAG00000006271	Mrpl27	97	40.940	Jaculus_jaculus
ENSCSAVG00000011477	-	73	45.690	ENSKMAG00000002075	mrpl27	76	45.690	Kryptolebias_marmoratus
ENSCSAVG00000011477	-	73	45.690	ENSLBEG00000027521	mrpl27	76	45.690	Labrus_bergylta
ENSCSAVG00000011477	-	62	48.958	ENSLACG00000015193	MRPL27	63	48.958	Latimeria_chalumnae
ENSCSAVG00000011477	-	86	40.299	ENSLOCG00000011095	mrpl27	90	40.299	Lepisosteus_oculatus
ENSCSAVG00000011477	-	71	47.788	ENSLAFG00000018289	MRPL27	74	47.788	Loxodonta_africana
ENSCSAVG00000011477	-	61	38.947	ENSMFAG00000008788	-	64	38.947	Macaca_fascicularis
ENSCSAVG00000011477	-	87	38.406	ENSMFAG00000031691	MRPL27	91	38.406	Macaca_fascicularis
ENSCSAVG00000011477	-	71	43.363	ENSMMUG00000017231	-	67	43.363	Macaca_mulatta
ENSCSAVG00000011477	-	61	38.947	ENSMMUG00000030700	-	64	38.947	Macaca_mulatta
ENSCSAVG00000011477	-	87	38.406	ENSMNEG00000020495	MRPL27	97	46.154	Macaca_nemestrina
ENSCSAVG00000011477	-	87	38.406	ENSMLEG00000038438	MRPL27	97	46.154	Mandrillus_leucophaeus
ENSCSAVG00000011477	-	73	44.828	ENSMAMG00000020279	mrpl27	76	44.828	Mastacembelus_armatus
ENSCSAVG00000011477	-	95	40.667	ENSMZEG00005003425	mrpl27	97	40.667	Maylandia_zebra
ENSCSAVG00000011477	-	83	41.176	ENSMGAG00000009149	MRPL27	92	41.176	Meleagris_gallopavo
ENSCSAVG00000011477	-	71	44.545	ENSMAUG00000015242	Mrpl27	81	44.545	Mesocricetus_auratus
ENSCSAVG00000011477	-	71	44.248	ENSMICG00000009698	MRPL27	74	44.248	Microcebus_murinus
ENSCSAVG00000011477	-	82	40.741	ENSMOCG00000013199	-	91	40.741	Microtus_ochrogaster
ENSCSAVG00000011477	-	71	43.636	ENSMOCG00000013020	-	85	43.636	Microtus_ochrogaster
ENSCSAVG00000011477	-	58	46.154	ENSMMOG00000000774	mrpl27	71	46.154	Mola_mola
ENSCSAVG00000011477	-	71	43.636	ENSMODG00000020899	MRPL27	68	43.636	Monodelphis_domestica
ENSCSAVG00000011477	-	73	42.982	ENSMALG00000015780	mrpl27	78	42.982	Monopterus_albus
ENSCSAVG00000011477	-	71	45.045	MGP_CAROLIEiJ_G0016989	Mrpl27	74	45.045	Mus_caroli
ENSCSAVG00000011477	-	71	45.045	ENSMUSG00000024414	Mrpl27	74	45.045	Mus_musculus
ENSCSAVG00000011477	-	71	45.045	MGP_PahariEiJ_G0018120	Mrpl27	74	45.045	Mus_pahari
ENSCSAVG00000011477	-	71	45.045	MGP_SPRETEiJ_G0017835	Mrpl27	74	45.045	Mus_spretus
ENSCSAVG00000011477	-	71	46.903	ENSMPUG00000015445	MRPL27	74	46.903	Mustela_putorius_furo
ENSCSAVG00000011477	-	71	45.133	ENSMLUG00000005539	MRPL27	94	39.860	Myotis_lucifugus
ENSCSAVG00000011477	-	69	45.946	ENSNGAG00000011345	Mrpl27	72	45.946	Nannospalax_galili
ENSCSAVG00000011477	-	95	40.667	ENSNBRG00000011848	mrpl27	97	40.667	Neolamprologus_brichardi
ENSCSAVG00000011477	-	71	45.133	ENSNLEG00000009044	MRPL27	97	47.253	Nomascus_leucogenys
ENSCSAVG00000011477	-	71	45.133	ENSMEUG00000004697	MRPL27	81	45.133	Notamacropus_eugenii
ENSCSAVG00000011477	-	95	38.095	ENSOPRG00000013236	MRPL27	90	38.095	Ochotona_princeps
ENSCSAVG00000011477	-	71	43.363	ENSODEG00000016720	MRPL27	74	43.363	Octodon_degus
ENSCSAVG00000011477	-	95	40.667	ENSONIG00000019508	mrpl27	97	40.667	Oreochromis_niloticus
ENSCSAVG00000011477	-	71	45.455	ENSOANG00000030806	MRPL27	66	45.455	Ornithorhynchus_anatinus
ENSCSAVG00000011477	-	71	45.045	ENSOCUG00000004601	MRPL27	74	45.045	Oryctolagus_cuniculus
ENSCSAVG00000011477	-	73	44.828	ENSORLG00000014738	mrpl27	76	44.828	Oryzias_latipes
ENSCSAVG00000011477	-	95	38.667	ENSORLG00020015667	mrpl27	96	38.667	Oryzias_latipes_hni
ENSCSAVG00000011477	-	73	43.966	ENSORLG00015013520	mrpl27	76	43.966	Oryzias_latipes_hsok
ENSCSAVG00000011477	-	73	45.690	ENSOMEG00000018425	mrpl27	68	45.690	Oryzias_melastigma
ENSCSAVG00000011477	-	75	41.667	ENSOGAG00000029263	-	79	41.667	Otolemur_garnettii
ENSCSAVG00000011477	-	75	39.496	ENSOGAG00000033367	-	78	39.496	Otolemur_garnettii
ENSCSAVG00000011477	-	75	43.333	ENSOGAG00000005385	-	79	43.333	Otolemur_garnettii
ENSCSAVG00000011477	-	71	46.018	ENSOARG00000004651	MRPL27	74	46.018	Ovis_aries
ENSCSAVG00000011477	-	71	45.133	ENSPPAG00000037578	MRPL27	74	45.133	Pan_paniscus
ENSCSAVG00000011477	-	87	42.029	ENSPPRG00000009444	MRPL27	97	48.352	Panthera_pardus
ENSCSAVG00000011477	-	58	48.352	ENSPTIG00000019684	MRPL27	97	48.352	Panthera_tigris_altaica
ENSCSAVG00000011477	-	71	45.133	ENSPTRG00000009396	MRPL27	74	45.133	Pan_troglodytes
ENSCSAVG00000011477	-	87	37.681	ENSPANG00000019883	-	91	37.681	Papio_anubis
ENSCSAVG00000011477	-	87	38.406	ENSPANG00000022492	-	91	38.406	Papio_anubis
ENSCSAVG00000011477	-	71	46.364	ENSPKIG00000009252	MRPL27	75	46.364	Paramormyrops_kingsleyae
ENSCSAVG00000011477	-	71	46.364	ENSPKIG00000011006	mrpl27	75	46.364	Paramormyrops_kingsleyae
ENSCSAVG00000011477	-	73	44.737	ENSPSIG00000006901	MRPL27	75	44.737	Pelodiscus_sinensis
ENSCSAVG00000011477	-	73	43.103	ENSPMGG00000019079	mrpl27	76	43.103	Periophthalmus_magnuspinnatus
ENSCSAVG00000011477	-	71	45.455	ENSPEMG00000020655	Mrpl27	74	45.455	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011477	-	73	45.690	ENSPFOG00000019153	-	74	45.690	Poecilia_formosa
ENSCSAVG00000011477	-	73	45.690	ENSPFOG00000006380	mrpl27	74	45.690	Poecilia_formosa
ENSCSAVG00000011477	-	73	45.690	ENSPLAG00000019989	mrpl27	74	45.690	Poecilia_latipinna
ENSCSAVG00000011477	-	73	46.552	ENSPMEG00000017133	mrpl27	74	46.552	Poecilia_mexicana
ENSCSAVG00000011477	-	73	46.552	ENSPMEG00000002546	-	74	46.552	Poecilia_mexicana
ENSCSAVG00000011477	-	73	45.690	ENSPREG00000017321	mrpl27	74	45.690	Poecilia_reticulata
ENSCSAVG00000011477	-	71	45.133	ENSPPYG00000008286	MRPL27	72	45.133	Pongo_abelii
ENSCSAVG00000011477	-	71	41.818	ENSPCAG00000002469	MRPL27	81	41.818	Procavia_capensis
ENSCSAVG00000011477	-	71	44.248	ENSPCOG00000014496	MRPL27	74	44.248	Propithecus_coquereli
ENSCSAVG00000011477	-	71	48.673	ENSPVAG00000016582	MRPL27	69	48.673	Pteropus_vampyrus
ENSCSAVG00000011477	-	95	40.667	ENSPNYG00000008975	mrpl27	97	40.667	Pundamilia_nyererei
ENSCSAVG00000011477	-	73	47.414	ENSPNAG00000010722	mrpl27	76	47.414	Pygocentrus_nattereri
ENSCSAVG00000011477	-	71	45.045	ENSRNOG00000003724	Mrpl27	74	45.045	Rattus_norvegicus
ENSCSAVG00000011477	-	87	37.681	ENSRBIG00000033398	MRPL27	91	37.681	Rhinopithecus_bieti
ENSCSAVG00000011477	-	87	37.681	ENSRROG00000030847	MRPL27	91	37.681	Rhinopithecus_roxellana
ENSCSAVG00000011477	-	61	48.421	ENSSBOG00000016577	-	64	48.421	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011477	-	59	39.130	ENSSBOG00000033685	-	87	39.130	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011477	-	71	44.545	ENSSHAG00000004216	MRPL27	69	44.545	Sarcophilus_harrisii
ENSCSAVG00000011477	-	90	41.727	ENSSFOG00015000879	mrpl27	92	41.727	Scleropages_formosus
ENSCSAVG00000011477	-	73	43.966	ENSSMAG00000001706	mrpl27	82	43.966	Scophthalmus_maximus
ENSCSAVG00000011477	-	73	40.708	ENSSDUG00000013202	mrpl27	96	43.956	Seriola_dumerili
ENSCSAVG00000011477	-	73	40.708	ENSSLDG00000011922	mrpl27	96	43.956	Seriola_lalandi_dorsalis
ENSCSAVG00000011477	-	73	45.133	ENSSPUG00000010135	MRPL27	74	45.133	Sphenodon_punctatus
ENSCSAVG00000011477	-	73	43.103	ENSSPAG00000020495	mrpl27	76	43.103	Stegastes_partitus
ENSCSAVG00000011477	-	71	45.133	ENSSSCG00000023783	MRPL27	74	45.133	Sus_scrofa
ENSCSAVG00000011477	-	81	43.307	ENSTGUG00000008925	MRPL27	94	43.307	Taeniopygia_guttata
ENSCSAVG00000011477	-	73	40.517	ENSTRUG00000024146	mrpl27	76	40.517	Takifugu_rubripes
ENSCSAVG00000011477	-	73	41.379	ENSTNIG00000019792	mrpl27	92	41.379	Tetraodon_nigroviridis
ENSCSAVG00000011477	-	71	46.903	ENSTBEG00000015816	MRPL27	74	46.903	Tupaia_belangeri
ENSCSAVG00000011477	-	71	45.133	ENSTTRG00000000202	MRPL27	70	45.133	Tursiops_truncatus
ENSCSAVG00000011477	-	71	45.133	ENSUAMG00000011300	MRPL27	74	45.133	Ursus_americanus
ENSCSAVG00000011477	-	71	45.133	ENSUMAG00000014818	MRPL27	50	45.133	Ursus_maritimus
ENSCSAVG00000011477	-	58	49.451	ENSVVUG00000000165	-	97	49.451	Vulpes_vulpes
ENSCSAVG00000011477	-	75	39.316	ENSXETG00000027422	mrpl27	88	39.316	Xenopus_tropicalis
ENSCSAVG00000011477	-	73	45.690	ENSXCOG00000003196	mrpl27	64	45.690	Xiphophorus_couchianus
ENSCSAVG00000011477	-	73	45.690	ENSXMAG00000024261	mrpl27	74	45.690	Xiphophorus_maculatus