EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011482 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 18404 bases
Position: chrreftig_1:4734964-4753367
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019590	IBN_N	PF03810.19	1.3e-11	1	1
ENSCSAVP00000019588	IBN_N	PF03810.19	4.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019802	-	3202	-	ENSCSAVP00000019590	1030 (aa)	-	H2ZPS4
ENSCSAVT00000019800	-	3410	-	ENSCSAVP00000019588	1023 (aa)	-	H2ZPS2
ENSCSAVT00000019801	-	2626	-	ENSCSAVP00000019589	812 (aa)	-	H2ZPS3

Gene Model

Click here to download ENSCSAVG00000011482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011482's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011482	-	100	35.203	ENSG00000196497	IPO4	94	35.618	Homo_sapiens
ENSCSAVG00000011482	-	97	37.066	ENSAPOG00000019018	ipo4	92	37.265	Acanthochromis_polyacanthus
ENSCSAVG00000011482	-	90	36.277	ENSAMEG00000016271	IPO4	78	35.404	Ailuropoda_melanoleuca
ENSCSAVG00000011482	-	98	38.296	ENSACIG00000004246	ipo4	93	37.941	Amphilophus_citrinellus
ENSCSAVG00000011482	-	99	36.969	ENSAOCG00000004773	ipo4	94	36.638	Amphiprion_ocellaris
ENSCSAVG00000011482	-	99	36.969	ENSAPEG00000002112	ipo4	94	36.982	Amphiprion_percula
ENSCSAVG00000011482	-	97	37.098	ENSATEG00000017082	ipo4	96	37.551	Anabas_testudineus
ENSCSAVG00000011482	-	89	36.085	ENSACAG00000003973	-	97	36.383	Anolis_carolinensis
ENSCSAVG00000011482	-	97	34.497	ENSANAG00000037973	IPO4	92	35.644	Aotus_nancymaae
ENSCSAVG00000011482	-	99	37.016	ENSACLG00000019742	ipo4	95	36.750	Astatotilapia_calliptera
ENSCSAVG00000011482	-	99	36.293	ENSAMXG00000037878	ipo4	94	36.293	Astyanax_mexicanus
ENSCSAVG00000011482	-	100	34.712	ENSBTAG00000002707	IPO4	94	35.221	Bos_taurus
ENSCSAVG00000011482	-	99	35.237	ENSCJAG00000006937	IPO4	94	36.135	Callithrix_jacchus
ENSCSAVG00000011482	-	100	35.680	ENSCAFG00000012049	IPO4	94	35.996	Canis_familiaris
ENSCSAVG00000011482	-	99	35.536	ENSCAFG00020002873	IPO4	95	34.895	Canis_lupus_dingo
ENSCSAVG00000011482	-	100	34.774	ENSCHIG00000009413	IPO4	91	35.283	Capra_hircus
ENSCSAVG00000011482	-	100	35.232	ENSTSYG00000002643	IPO4	94	34.890	Carlito_syrichta
ENSCSAVG00000011482	-	100	35.915	ENSCPOG00000014783	IPO4	94	36.135	Cavia_porcellus
ENSCSAVG00000011482	-	97	35.159	ENSCCAG00000037929	IPO4	94	35.811	Cebus_capucinus
ENSCSAVG00000011482	-	100	35.590	ENSCATG00000040395	IPO4	94	36.004	Cercocebus_atys
ENSCSAVG00000011482	-	100	36.047	ENSCLAG00000012817	IPO4	94	36.267	Chinchilla_lanigera
ENSCSAVG00000011482	-	94	35.605	ENSCPBG00000025757	IPO4	92	35.729	Chrysemys_picta_bellii
ENSCSAVG00000011482	-	96	81.043	ENSCING00000008639	-	97	80.843	Ciona_intestinalis
ENSCSAVG00000011482	-	100	35.203	ENSCANG00000029513	IPO4	94	35.838	Colobus_angolensis_palliatus
ENSCSAVG00000011482	-	100	34.552	ENSCGRG00001001217	Ipo4	94	35.091	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011482	-	100	34.552	ENSCGRG00000014404	Ipo4	94	35.091	Cricetulus_griseus_crigri
ENSCSAVG00000011482	-	99	35.585	ENSCSEG00000009606	ipo4	94	35.558	Cynoglossus_semilaevis
ENSCSAVG00000011482	-	99	35.339	ENSCVAG00000002281	ipo4	93	34.506	Cyprinodon_variegatus
ENSCSAVG00000011482	-	99	37.814	ENSDARG00000041493	ipo4	93	37.741	Danio_rerio
ENSCSAVG00000011482	-	100	36.197	ENSDNOG00000000366	IPO4	94	35.907	Dasypus_novemcinctus
ENSCSAVG00000011482	-	99	35.749	ENSDORG00000009274	Ipo4	94	35.942	Dipodomys_ordii
ENSCSAVG00000011482	-	100	34.841	ENSETEG00000018381	IPO4	94	35.255	Echinops_telfairi
ENSCSAVG00000011482	-	95	36.290	ENSEASG00005011954	IPO4	94	36.623	Equus_asinus_asinus
ENSCSAVG00000011482	-	98	36.364	ENSECAG00000009909	IPO4	92	36.686	Equus_caballus
ENSCSAVG00000011482	-	99	36.807	ENSELUG00000020628	ipo4	93	36.969	Esox_lucius
ENSCSAVG00000011482	-	100	35.618	ENSFCAG00000005587	IPO4	94	35.714	Felis_catus
ENSCSAVG00000011482	-	100	34.203	ENSFDAG00000000725	IPO4	94	33.748	Fukomys_damarensis
ENSCSAVG00000011482	-	84	41.447	ENSFHEG00000009351	ipo4	87	41.447	Fundulus_heteroclitus
ENSCSAVG00000011482	-	98	37.894	ENSGMOG00000001801	ipo4	92	37.598	Gadus_morhua
ENSCSAVG00000011482	-	99	36.827	ENSGAFG00000005601	ipo4	93	36.346	Gambusia_affinis
ENSCSAVG00000011482	-	99	36.127	ENSGACG00000002276	ipo4	94	35.472	Gasterosteus_aculeatus
ENSCSAVG00000011482	-	100	35.397	ENSGGOG00000016062	IPO4	94	35.811	Gorilla_gorilla
ENSCSAVG00000011482	-	98	37.537	ENSHBUG00000023269	ipo4	93	37.266	Haplochromis_burtoni
ENSCSAVG00000011482	-	100	35.853	ENSHGLG00000002923	IPO4	94	36.074	Heterocephalus_glaber_female
ENSCSAVG00000011482	-	100	35.659	ENSHGLG00100003725	IPO4	94	35.880	Heterocephalus_glaber_male
ENSCSAVG00000011482	-	97	36.152	ENSHCOG00000016854	ipo4	91	36.054	Hippocampus_comes
ENSCSAVG00000011482	-	97	37.055	ENSIPUG00000001185	ipo4	91	37.475	Ictalurus_punctatus
ENSCSAVG00000011482	-	100	35.577	ENSSTOG00000002288	IPO4	94	36.372	Ictidomys_tridecemlineatus
ENSCSAVG00000011482	-	96	36.200	ENSJJAG00000019002	Ipo4	90	36.500	Jaculus_jaculus
ENSCSAVG00000011482	-	98	36.640	ENSKMAG00000004627	ipo4	92	36.444	Kryptolebias_marmoratus
ENSCSAVG00000011482	-	99	37.476	ENSLBEG00000024952	ipo4	94	37.118	Labrus_bergylta
ENSCSAVG00000011482	-	100	35.708	ENSLACG00000001428	IPO4	94	36.082	Latimeria_chalumnae
ENSCSAVG00000011482	-	79	34.232	ENSLOCG00000001149	ipo4	81	34.048	Lepisosteus_oculatus
ENSCSAVG00000011482	-	100	35.391	ENSLAFG00000015852	IPO4	94	35.487	Loxodonta_africana
ENSCSAVG00000011482	-	100	35.590	ENSMFAG00000000743	IPO4	94	36.004	Macaca_fascicularis
ENSCSAVG00000011482	-	100	35.493	ENSMMUG00000012481	IPO4	94	35.907	Macaca_mulatta
ENSCSAVG00000011482	-	100	35.493	ENSMNEG00000043531	IPO4	94	35.907	Macaca_nemestrina
ENSCSAVG00000011482	-	100	35.397	ENSMLEG00000042067	IPO4	94	35.811	Mandrillus_leucophaeus
ENSCSAVG00000011482	-	98	36.884	ENSMAMG00000021976	ipo4	92	36.686	Mastacembelus_armatus
ENSCSAVG00000011482	-	98	37.537	ENSMZEG00005017273	ipo4	93	37.266	Maylandia_zebra
ENSCSAVG00000011482	-	100	34.712	ENSMAUG00000017565	Ipo4	94	35.187	Mesocricetus_auratus
ENSCSAVG00000011482	-	100	35.549	ENSMICG00000001719	IPO4	94	35.962	Microcebus_murinus
ENSCSAVG00000011482	-	100	35.187	ENSMOCG00000020462	Ipo4	94	35.570	Microtus_ochrogaster
ENSCSAVG00000011482	-	99	36.741	ENSMMOG00000005264	ipo4	92	36.946	Mola_mola
ENSCSAVG00000011482	-	96	36.072	ENSMODG00000003337	IPO4	88	35.743	Monodelphis_domestica
ENSCSAVG00000011482	-	98	35.162	ENSMALG00000001587	ipo4	92	35.260	Monopterus_albus
ENSCSAVG00000011482	-	100	34.808	MGP_CAROLIEiJ_G0019305	Ipo4	94	35.000	Mus_caroli
ENSCSAVG00000011482	-	100	34.423	ENSMUSG00000002319	Ipo4	94	35.000	Mus_musculus
ENSCSAVG00000011482	-	100	34.808	MGP_PahariEiJ_G0030322	Ipo4	94	35.000	Mus_pahari
ENSCSAVG00000011482	-	100	34.615	MGP_SPRETEiJ_G0020194	Ipo4	94	34.808	Mus_spretus
ENSCSAVG00000011482	-	100	35.198	ENSMPUG00000005916	IPO4	94	36.189	Mustela_putorius_furo
ENSCSAVG00000011482	-	100	36.143	ENSMLUG00000025277	IPO4	81	36.477	Myotis_lucifugus
ENSCSAVG00000011482	-	100	35.266	ENSNGAG00000019340	Ipo4	94	35.873	Nannospalax_galili
ENSCSAVG00000011482	-	98	38.128	ENSNBRG00000005870	ipo4	92	37.734	Neolamprologus_brichardi
ENSCSAVG00000011482	-	98	36.337	ENSOPRG00000016615	IPO4	91	36.210	Ochotona_princeps
ENSCSAVG00000011482	-	100	35.106	ENSODEG00000002609	IPO4	94	35.425	Octodon_degus
ENSCSAVG00000011482	-	98	37.561	ENSONIG00000014574	ipo4	92	37.365	Oreochromis_niloticus
ENSCSAVG00000011482	-	100	35.453	ENSOCUG00000002881	IPO4	91	36.426	Oryctolagus_cuniculus
ENSCSAVG00000011482	-	98	37.955	ENSORLG00000006457	ipo4	95	37.697	Oryzias_latipes
ENSCSAVG00000011482	-	98	38.053	ENSORLG00020004286	ipo4	92	37.992	Oryzias_latipes_hni
ENSCSAVG00000011482	-	98	37.856	ENSORLG00015021856	ipo4	92	37.598	Oryzias_latipes_hsok
ENSCSAVG00000011482	-	98	37.365	ENSOMEG00000016203	ipo4	92	37.463	Oryzias_melastigma
ENSCSAVG00000011482	-	98	36.059	ENSOGAG00000010642	IPO4	92	36.667	Otolemur_garnettii
ENSCSAVG00000011482	-	100	34.812	ENSOARG00000019188	IPO4	94	35.487	Ovis_aries
ENSCSAVG00000011482	-	100	35.403	ENSPPAG00000035476	IPO4	94	35.887	Pan_paniscus
ENSCSAVG00000011482	-	100	35.521	ENSPPRG00000023607	IPO4	94	35.618	Panthera_pardus
ENSCSAVG00000011482	-	100	35.714	ENSPTIG00000008720	IPO4	94	35.811	Panthera_tigris_altaica
ENSCSAVG00000011482	-	100	35.493	ENSPTRG00000006200	IPO4	94	35.907	Pan_troglodytes
ENSCSAVG00000011482	-	100	35.300	ENSPANG00000026278	IPO4	94	35.714	Papio_anubis
ENSCSAVG00000011482	-	99	35.871	ENSPKIG00000007830	ipo4	94	35.951	Paramormyrops_kingsleyae
ENSCSAVG00000011482	-	97	35.481	ENSPKIG00000007683	-	91	35.608	Paramormyrops_kingsleyae
ENSCSAVG00000011482	-	97	35.196	ENSPMGG00000020871	ipo4	96	35.346	Periophthalmus_magnuspinnatus
ENSCSAVG00000011482	-	100	34.519	ENSPEMG00000016160	Ipo4	94	35.447	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011482	-	96	35.371	ENSPCIG00000010718	IPO4	93	35.371	Phascolarctos_cinereus
ENSCSAVG00000011482	-	99	36.119	ENSPFOG00000009255	ipo4	93	36.092	Poecilia_formosa
ENSCSAVG00000011482	-	99	36.477	ENSPLAG00000020556	ipo4	93	36.285	Poecilia_latipinna
ENSCSAVG00000011482	-	99	36.023	ENSPMEG00000013102	ipo4	93	36.092	Poecilia_mexicana
ENSCSAVG00000011482	-	99	36.476	ENSPREG00000017605	ipo4	93	35.996	Poecilia_reticulata
ENSCSAVG00000011482	-	100	35.140	ENSPPYG00000005688	IPO4	94	35.942	Pongo_abelii
ENSCSAVG00000011482	-	100	36.599	ENSPCAG00000015669	IPO4	94	36.555	Procavia_capensis
ENSCSAVG00000011482	-	100	35.072	ENSPCOG00000015319	IPO4	94	35.680	Propithecus_coquereli
ENSCSAVG00000011482	-	100	35.044	ENSPVAG00000010755	IPO4	94	36.154	Pteropus_vampyrus
ENSCSAVG00000011482	-	99	36.424	ENSPNYG00000021414	ipo4	92	37.070	Pundamilia_nyererei
ENSCSAVG00000011482	-	99	36.959	ENSPNAG00000027964	ipo4	91	37.982	Pygocentrus_nattereri
ENSCSAVG00000011482	-	100	34.552	ENSRNOG00000019553	Ipo4	94	34.841	Rattus_norvegicus
ENSCSAVG00000011482	-	100	35.203	ENSRBIG00000027704	IPO4	94	35.618	Rhinopithecus_bieti
ENSCSAVG00000011482	-	100	35.397	ENSRROG00000011492	IPO4	94	35.618	Rhinopithecus_roxellana
ENSCSAVG00000011482	-	100	33.946	ENSSBOG00000020162	IPO4	94	34.586	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011482	-	96	34.940	ENSSHAG00000002619	IPO4	87	34.940	Sarcophilus_harrisii
ENSCSAVG00000011482	-	99	35.535	ENSSFOG00015012267	ipo4	91	36.631	Scleropages_formosus
ENSCSAVG00000011482	-	98	36.931	ENSSFOG00015014437	IPO4	91	36.931	Scleropages_formosus
ENSCSAVG00000011482	-	98	37.132	ENSSMAG00000019912	ipo4	92	36.961	Scophthalmus_maximus
ENSCSAVG00000011482	-	98	35.103	ENSSDUG00000017513	ipo4	92	35.693	Seriola_dumerili
ENSCSAVG00000011482	-	100	36.564	ENSSLDG00000003869	ipo4	94	36.433	Seriola_lalandi_dorsalis
ENSCSAVG00000011482	-	72	37.284	ENSSARG00000010701	IPO4	67	37.751	Sorex_araneus
ENSCSAVG00000011482	-	98	37.488	ENSSPAG00000008486	ipo4	92	37.525	Stegastes_partitus
ENSCSAVG00000011482	-	100	35.169	ENSSSCG00000002000	IPO4	94	35.169	Sus_scrofa
ENSCSAVG00000011482	-	99	36.822	ENSTRUG00000012832	ipo4	94	35.977	Takifugu_rubripes
ENSCSAVG00000011482	-	99	34.686	ENSTNIG00000005191	ipo4	93	34.678	Tetraodon_nigroviridis
ENSCSAVG00000011482	-	99	34.236	ENSTBEG00000009781	IPO4	89	38.318	Tupaia_belangeri
ENSCSAVG00000011482	-	100	35.067	ENSTTRG00000008626	IPO4	94	35.029	Tursiops_truncatus
ENSCSAVG00000011482	-	100	35.130	ENSUAMG00000024037	IPO4	94	35.543	Ursus_americanus
ENSCSAVG00000011482	-	99	35.300	ENSXETG00000014621	ipo4	93	35.618	Xenopus_tropicalis
ENSCSAVG00000011482	-	99	36.178	ENSXCOG00000005208	ipo4	93	36.081	Xiphophorus_couchianus
ENSCSAVG00000011482	-	99	36.381	ENSXMAG00000006041	ipo4	93	36.381	Xiphophorus_maculatus