EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000011566 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1409 bases
Position: chrreftig_16:4843393-4844801
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019725	ResIII	PF04851.15	7.6e-06	1	1
ENSCSAVP00000019725	DEAD	PF00270.29	1e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019938	-	1341	-	ENSCSAVP00000019725	446 (aa)	-	H2ZQ59

Gene Model

Click here to download ENSCSAVG00000011566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000011566	-	83	32.316	ENSCSAVG00000004304	-	60	32.895
ENSCSAVG00000011566	-	78	34.916	ENSCSAVG00000008916	-	96	34.921
ENSCSAVG00000011566	-	65	31.667	ENSCSAVG00000004191	-	59	31.667
ENSCSAVG00000011566	-	70	30.435	ENSCSAVG00000006341	-	89	30.435
ENSCSAVG00000011566	-	68	46.774	ENSCSAVG00000003028	-	54	46.774
ENSCSAVG00000011566	-	81	32.143	ENSCSAVG00000000630	-	96	32.143
ENSCSAVG00000011566	-	80	34.726	ENSCSAVG00000003375	-	70	33.503
ENSCSAVG00000011566	-	94	32.949	ENSCSAVG00000002353	-	90	31.781
ENSCSAVG00000011566	-	90	45.985	ENSCSAVG00000000522	-	97	45.985
ENSCSAVG00000011566	-	82	32.110	ENSCSAVG00000010817	-	67	32.110
ENSCSAVG00000011566	-	84	35.142	ENSCSAVG00000004895	-	71	35.142
ENSCSAVG00000011566	-	77	40.227	ENSCSAVG00000003023	-	62	40.227
ENSCSAVG00000011566	-	73	34.959	ENSCSAVG00000004227	-	71	34.959
ENSCSAVG00000011566	-	76	35.920	ENSCSAVG00000006949	-	72	35.920
ENSCSAVG00000011566	-	83	32.440	ENSCSAVG00000009920	-	98	32.440
ENSCSAVG00000011566	-	75	32.840	ENSCSAVG00000002162	-	84	31.856
ENSCSAVG00000011566	-	88	32.181	ENSCSAVG00000001436	-	66	32.181
ENSCSAVG00000011566	-	71	38.154	ENSCSAVG00000002180	-	85	38.154
ENSCSAVG00000011566	-	68	33.333	ENSCSAVG00000004158	-	69	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011566	-	96	70.766	ENSG00000213782	DDX47	95	70.766	Homo_sapiens
ENSCSAVG00000011566	-	89	77.694	ENSAPOG00000021751	ddx47	83	77.694	Acanthochromis_polyacanthus
ENSCSAVG00000011566	-	96	71.230	ENSAMEG00000010740	DDX47	95	71.230	Ailuropoda_melanoleuca
ENSCSAVG00000011566	-	93	74.762	ENSACIG00000022802	ddx47	87	74.762	Amphilophus_citrinellus
ENSCSAVG00000011566	-	93	75.845	ENSAOCG00000015213	ddx47	86	75.120	Amphiprion_ocellaris
ENSCSAVG00000011566	-	93	75.120	ENSAPEG00000014476	ddx47	94	75.676	Amphiprion_percula
ENSCSAVG00000011566	-	93	75.656	ENSATEG00000010277	ddx47	87	75.656	Anabas_testudineus
ENSCSAVG00000011566	-	89	75.689	ENSAPLG00000015324	DDX47	93	72.093	Anas_platyrhynchos
ENSCSAVG00000011566	-	98	70.721	ENSACAG00000010648	DDX47	99	70.721	Anolis_carolinensis
ENSCSAVG00000011566	-	78	75.645	ENSANAG00000025235	DDX47	95	75.645	Aotus_nancymaae
ENSCSAVG00000011566	-	95	73.286	ENSAMXG00000010727	ddx47	89	73.286	Astyanax_mexicanus
ENSCSAVG00000011566	-	96	70.766	ENSBTAG00000019608	DDX47	94	70.766	Bos_taurus
ENSCSAVG00000011566	-	90	66.998	WBGene00012059	T26G10.1	83	66.262	Caenorhabditis_elegans
ENSCSAVG00000011566	-	96	70.960	ENSCJAG00000021633	DDX47	95	70.766	Callithrix_jacchus
ENSCSAVG00000011566	-	90	74.194	ENSCAFG00000013224	DDX47	90	70.507	Canis_familiaris
ENSCSAVG00000011566	-	95	71.226	ENSCAFG00020006612	DDX47	95	70.507	Canis_lupus_dingo
ENSCSAVG00000011566	-	96	70.998	ENSCHIG00000026011	DDX47	94	70.998	Capra_hircus
ENSCSAVG00000011566	-	99	69.457	ENSTSYG00000002978	DDX47	96	69.457	Carlito_syrichta
ENSCSAVG00000011566	-	58	76.027	ENSCAPG00000002814	DDX47	99	76.027	Cavia_aperea
ENSCSAVG00000011566	-	95	71.226	ENSCPOG00000035172	DDX47	95	70.507	Cavia_porcellus
ENSCSAVG00000011566	-	96	70.766	ENSCCAG00000025717	DDX47	95	70.766	Cebus_capucinus
ENSCSAVG00000011566	-	96	70.766	ENSCATG00000014281	-	95	70.766	Cercocebus_atys
ENSCSAVG00000011566	-	60	67.164	ENSCATG00000038188	-	91	74.348	Cercocebus_atys
ENSCSAVG00000011566	-	99	69.111	ENSCLAG00000015856	DDX47	99	69.111	Chinchilla_lanigera
ENSCSAVG00000011566	-	96	70.766	ENSCSAG00000008569	DDX47	95	70.766	Chlorocebus_sabaeus
ENSCSAVG00000011566	-	69	55.195	ENSCHOG00000010943	DDX47	66	55.195	Choloepus_hoffmanni
ENSCSAVG00000011566	-	97	71.264	ENSCPBG00000020967	-	96	71.264	Chrysemys_picta_bellii
ENSCSAVG00000011566	-	98	88.276	ENSCING00000002081	-	99	88.063	Ciona_intestinalis
ENSCSAVG00000011566	-	96	70.766	ENSCANG00000040222	DDX47	95	70.766	Colobus_angolensis_palliatus
ENSCSAVG00000011566	-	96	71.429	ENSCGRG00001014927	Ddx47	95	71.230	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011566	-	96	71.429	ENSCGRG00000010351	Ddx47	95	71.698	Cricetulus_griseus_crigri
ENSCSAVG00000011566	-	90	74.265	ENSCSEG00000007687	ddx47	93	74.265	Cynoglossus_semilaevis
ENSCSAVG00000011566	-	96	65.358	ENSDNOG00000040799	DDX47	95	65.358	Dasypus_novemcinctus
ENSCSAVG00000011566	-	94	70.283	FBgn0032919	CG9253	87	67.640	Drosophila_melanogaster
ENSCSAVG00000011566	-	72	68.100	ENSETEG00000011487	DDX47	78	68.100	Echinops_telfairi
ENSCSAVG00000011566	-	99	68.958	ENSEASG00005014653	DDX47	99	68.958	Equus_asinus_asinus
ENSCSAVG00000011566	-	99	68.958	ENSECAG00000023622	DDX47	99	68.958	Equus_caballus
ENSCSAVG00000011566	-	83	68.750	ENSEEUG00000008639	DDX47	81	68.750	Erinaceus_europaeus
ENSCSAVG00000011566	-	92	75.000	ENSELUG00000009495	ddx47	78	75.000	Esox_lucius
ENSCSAVG00000011566	-	96	71.462	ENSFCAG00000013990	DDX47	95	71.462	Felis_catus
ENSCSAVG00000011566	-	92	74.634	ENSFALG00000011391	DDX47	93	72.581	Ficedula_albicollis
ENSCSAVG00000011566	-	98	70.387	ENSFDAG00000014635	-	97	70.387	Fukomys_damarensis
ENSCSAVG00000011566	-	62	57.143	ENSFDAG00000004127	-	68	56.429	Fukomys_damarensis
ENSCSAVG00000011566	-	89	76.441	ENSFHEG00000011435	ddx47	91	72.706	Fundulus_heteroclitus
ENSCSAVG00000011566	-	86	76.240	ENSGMOG00000010290	ddx47	100	76.240	Gadus_morhua
ENSCSAVG00000011566	-	89	75.689	ENSGALG00000011794	DDX47	97	71.041	Gallus_gallus
ENSCSAVG00000011566	-	93	74.762	ENSGAFG00000017403	ddx47	88	74.762	Gambusia_affinis
ENSCSAVG00000011566	-	89	76.190	ENSGACG00000007092	ddx47	86	76.190	Gasterosteus_aculeatus
ENSCSAVG00000011566	-	99	69.213	ENSGAGG00000023801	DDX47	89	69.213	Gopherus_agassizii
ENSCSAVG00000011566	-	96	70.766	ENSGGOG00000005882	DDX47	95	70.766	Gorilla_gorilla
ENSCSAVG00000011566	-	93	74.762	ENSHBUG00000022213	ddx47	88	74.762	Haplochromis_burtoni
ENSCSAVG00000011566	-	98	69.704	ENSHGLG00000007623	DDX47	97	69.704	Heterocephalus_glaber_female
ENSCSAVG00000011566	-	98	69.704	ENSHGLG00100009764	DDX47	97	69.704	Heterocephalus_glaber_male
ENSCSAVG00000011566	-	93	74.092	ENSHCOG00000005496	ddx47	86	74.092	Hippocampus_comes
ENSCSAVG00000011566	-	93	73.494	ENSIPUG00000023788	ddx47	88	73.494	Ictalurus_punctatus
ENSCSAVG00000011566	-	96	70.327	ENSSTOG00000027266	DDX47	97	70.327	Ictidomys_tridecemlineatus
ENSCSAVG00000011566	-	96	70.998	ENSJJAG00000000118	Ddx47	95	70.998	Jaculus_jaculus
ENSCSAVG00000011566	-	90	76.733	ENSKMAG00000013071	ddx47	85	74.940	Kryptolebias_marmoratus
ENSCSAVG00000011566	-	89	77.193	ENSLBEG00000028348	ddx47	84	76.098	Labrus_bergylta
ENSCSAVG00000011566	-	96	72.664	ENSLACG00000013814	DDX47	95	72.350	Latimeria_chalumnae
ENSCSAVG00000011566	-	99	68.667	ENSLAFG00000015474	DDX47	99	68.667	Loxodonta_africana
ENSCSAVG00000011566	-	96	70.766	ENSMFAG00000042577	DDX47	95	70.766	Macaca_fascicularis
ENSCSAVG00000011566	-	96	70.766	ENSMMUG00000017993	DDX47	95	70.766	Macaca_mulatta
ENSCSAVG00000011566	-	96	61.538	ENSMNEG00000044164	DDX47	95	61.538	Macaca_nemestrina
ENSCSAVG00000011566	-	60	67.164	ENSMLEG00000037204	-	90	67.164	Mandrillus_leucophaeus
ENSCSAVG00000011566	-	96	70.766	ENSMLEG00000040358	-	95	70.766	Mandrillus_leucophaeus
ENSCSAVG00000011566	-	90	77.171	ENSMAMG00000008915	ddx47	87	75.179	Mastacembelus_armatus
ENSCSAVG00000011566	-	93	63.443	ENSMZEG00005004902	DDX47	87	63.443	Maylandia_zebra
ENSCSAVG00000011566	-	67	73.750	ENSMZEG00005022989	-	93	44.068	Maylandia_zebra
ENSCSAVG00000011566	-	88	75.888	ENSMGAG00000011857	DDX47	98	72.235	Meleagris_gallopavo
ENSCSAVG00000011566	-	96	70.998	ENSMAUG00000012214	Ddx47	95	70.998	Mesocricetus_auratus
ENSCSAVG00000011566	-	88	69.048	ENSMICG00000010086	DDX47	99	70.164	Microcebus_murinus
ENSCSAVG00000011566	-	96	70.766	ENSMOCG00000003693	Ddx47	95	70.766	Microtus_ochrogaster
ENSCSAVG00000011566	-	89	72.500	ENSMMOG00000008610	ddx47	92	68.998	Mola_mola
ENSCSAVG00000011566	-	99	70.362	ENSMODG00000018223	DDX47	96	70.362	Monodelphis_domestica
ENSCSAVG00000011566	-	93	73.986	ENSMALG00000002420	ddx47	87	73.986	Monopterus_albus
ENSCSAVG00000011566	-	96	70.534	MGP_CAROLIEiJ_G0028986	Ddx47	89	77.451	Mus_caroli
ENSCSAVG00000011566	-	96	70.534	ENSMUSG00000030204	Ddx47	89	77.451	Mus_musculus
ENSCSAVG00000011566	-	96	70.766	MGP_PahariEiJ_G0022748	Ddx47	95	71.615	Mus_pahari
ENSCSAVG00000011566	-	96	70.534	MGP_SPRETEiJ_G0030034	Ddx47	89	77.451	Mus_spretus
ENSCSAVG00000011566	-	99	69.845	ENSMPUG00000011726	DDX47	99	69.845	Mustela_putorius_furo
ENSCSAVG00000011566	-	96	71.462	ENSMLUG00000003163	DDX47	95	71.462	Myotis_lucifugus
ENSCSAVG00000011566	-	96	70.998	ENSNGAG00000020166	Ddx47	95	70.998	Nannospalax_galili
ENSCSAVG00000011566	-	93	74.702	ENSNBRG00000001394	ddx47	88	74.702	Neolamprologus_brichardi
ENSCSAVG00000011566	-	96	70.998	ENSNLEG00000003605	DDX47	95	70.998	Nomascus_leucogenys
ENSCSAVG00000011566	-	87	62.725	ENSMEUG00000005930	DDX47	98	62.725	Notamacropus_eugenii
ENSCSAVG00000011566	-	75	70.270	ENSOPRG00000014446	DDX47	74	70.270	Ochotona_princeps
ENSCSAVG00000011566	-	96	70.960	ENSODEG00000012890	DDX47	93	70.766	Octodon_degus
ENSCSAVG00000011566	-	93	74.940	ENSONIG00000008325	ddx47	93	74.940	Oreochromis_niloticus
ENSCSAVG00000011566	-	59	70.260	ENSOANG00000003026	-	94	70.260	Ornithorhynchus_anatinus
ENSCSAVG00000011566	-	96	70.960	ENSOCUG00000014390	DDX47	95	70.766	Oryctolagus_cuniculus
ENSCSAVG00000011566	-	93	75.238	ENSORLG00000015021	ddx47	86	75.238	Oryzias_latipes
ENSCSAVG00000011566	-	93	75.000	ENSORLG00020005546	ddx47	93	75.550	Oryzias_latipes_hni
ENSCSAVG00000011566	-	93	75.238	ENSORLG00015017712	ddx47	86	75.238	Oryzias_latipes_hsok
ENSCSAVG00000011566	-	92	75.362	ENSOMEG00000008065	ddx47	86	75.000	Oryzias_melastigma
ENSCSAVG00000011566	-	99	66.667	ENSOGAG00000003748	DDX47	99	66.667	Otolemur_garnettii
ENSCSAVG00000011566	-	96	70.998	ENSOARG00000020845	DDX47	92	70.998	Ovis_aries
ENSCSAVG00000011566	-	96	70.766	ENSPPAG00000039793	DDX47	95	70.766	Pan_paniscus
ENSCSAVG00000011566	-	96	71.462	ENSPPRG00000017561	DDX47	95	71.462	Panthera_pardus
ENSCSAVG00000011566	-	96	71.462	ENSPTIG00000019604	DDX47	95	71.462	Panthera_tigris_altaica
ENSCSAVG00000011566	-	96	70.766	ENSPTRG00000033743	DDX47	95	70.766	Pan_troglodytes
ENSCSAVG00000011566	-	96	70.766	ENSPANG00000016430	DDX47	95	70.766	Papio_anubis
ENSCSAVG00000011566	-	93	75.362	ENSPKIG00000006718	ddx47	87	75.931	Paramormyrops_kingsleyae
ENSCSAVG00000011566	-	98	70.320	ENSPSIG00000006056	DDX47	95	70.320	Pelodiscus_sinensis
ENSCSAVG00000011566	-	93	74.155	ENSPMGG00000009920	ddx47	86	74.155	Periophthalmus_magnuspinnatus
ENSCSAVG00000011566	-	96	70.998	ENSPEMG00000009746	Ddx47	95	70.998	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011566	-	88	76.904	ENSPMAG00000000186	-	94	76.904	Petromyzon_marinus
ENSCSAVG00000011566	-	99	69.910	ENSPCIG00000029927	DDX47	96	69.910	Phascolarctos_cinereus
ENSCSAVG00000011566	-	95	73.832	ENSPFOG00000003330	ddx47	86	73.832	Poecilia_formosa
ENSCSAVG00000011566	-	90	69.118	ENSPLAG00000014318	ddx47	87	69.118	Poecilia_latipinna
ENSCSAVG00000011566	-	95	73.832	ENSPMEG00000018616	ddx47	86	73.832	Poecilia_mexicana
ENSCSAVG00000011566	-	93	74.940	ENSPREG00000015560	ddx47	87	73.508	Poecilia_reticulata
ENSCSAVG00000011566	-	96	70.766	ENSPPYG00000004309	DDX47	95	70.766	Pongo_abelii
ENSCSAVG00000011566	-	96	70.833	ENSPCOG00000028218	DDX47	95	70.833	Propithecus_coquereli
ENSCSAVG00000011566	-	96	67.981	ENSPVAG00000002640	DDX47	95	67.981	Pteropus_vampyrus
ENSCSAVG00000011566	-	93	74.762	ENSPNYG00000020669	ddx47	87	74.762	Pundamilia_nyererei
ENSCSAVG00000011566	-	97	72.854	ENSPNAG00000011435	ddx47	92	72.854	Pygocentrus_nattereri
ENSCSAVG00000011566	-	96	70.766	ENSRNOG00000007838	Ddx47	95	70.766	Rattus_norvegicus
ENSCSAVG00000011566	-	97	70.439	ENSRBIG00000026934	DDX47	95	70.439	Rhinopithecus_bieti
ENSCSAVG00000011566	-	97	70.439	ENSRROG00000025014	DDX47	95	70.439	Rhinopithecus_roxellana
ENSCSAVG00000011566	-	93	53.623	YHR065C	-	82	53.623	Saccharomyces_cerevisiae
ENSCSAVG00000011566	-	96	70.766	ENSSBOG00000035866	DDX47	95	70.766	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011566	-	99	70.136	ENSSHAG00000010825	DDX47	85	70.136	Sarcophilus_harrisii
ENSCSAVG00000011566	-	90	74.938	ENSSFOG00015013392	ddx47	86	74.938	Scleropages_formosus
ENSCSAVG00000011566	-	89	76.942	ENSSMAG00000004179	ddx47	85	74.224	Scophthalmus_maximus
ENSCSAVG00000011566	-	90	76.179	ENSSDUG00000018110	ddx47	77	76.179	Seriola_dumerili
ENSCSAVG00000011566	-	95	74.766	ENSSLDG00000018142	ddx47	86	74.766	Seriola_lalandi_dorsalis
ENSCSAVG00000011566	-	63	74.552	ENSSARG00000007535	DDX47	93	74.552	Sorex_araneus
ENSCSAVG00000011566	-	96	71.926	ENSSPUG00000004958	DDX47	94	71.926	Sphenodon_punctatus
ENSCSAVG00000011566	-	92	75.485	ENSSPAG00000016431	ddx47	84	74.702	Stegastes_partitus
ENSCSAVG00000011566	-	99	68.958	ENSSSCG00000033149	DDX47	96	70.327	Sus_scrofa
ENSCSAVG00000011566	-	92	74.634	ENSTGUG00000009385	DDX47	99	70.354	Taeniopygia_guttata
ENSCSAVG00000011566	-	93	74.879	ENSTRUG00000021826	ddx47	87	74.879	Takifugu_rubripes
ENSCSAVG00000011566	-	78	72.414	ENSTBEG00000013697	DDX47	76	72.414	Tupaia_belangeri
ENSCSAVG00000011566	-	99	68.736	ENSTTRG00000015036	DDX47	99	68.736	Tursiops_truncatus
ENSCSAVG00000011566	-	96	71.230	ENSUAMG00000016382	DDX47	98	74.194	Ursus_americanus
ENSCSAVG00000011566	-	96	71.230	ENSUMAG00000002358	DDX47	93	76.190	Ursus_maritimus
ENSCSAVG00000011566	-	78	57.143	ENSVPAG00000012483	-	99	57.143	Vicugna_pacos
ENSCSAVG00000011566	-	90	74.194	ENSVVUG00000004697	DDX47	90	70.507	Vulpes_vulpes
ENSCSAVG00000011566	-	93	73.861	ENSXETG00000022984	ddx47	99	70.089	Xenopus_tropicalis
ENSCSAVG00000011566	-	92	76.039	ENSXCOG00000015880	ddx47	86	76.039	Xiphophorus_couchianus
ENSCSAVG00000011566	-	93	75.179	ENSXMAG00000008268	ddx47	78	75.179	Xiphophorus_maculatus