EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011571 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3315 bases
Position: chrreftig_16:4865958-4869272
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019733	LSM	PF01423.22	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019946	-	1287	-	ENSCSAVP00000019733	271 (aa)	-	H2ZQ67

Gene Model

Click here to download ENSCSAVG00000011571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011571's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011571	-	68	52.174	ENSCING00000002109	-	99	52.174	Ciona_intestinalis
ENSCSAVG00000011571	-	98	31.579	ENSCSEG00000019951	lsm11	85	31.579	Cynoglossus_semilaevis
ENSCSAVG00000011571	-	77	32.864	ENSMMOG00000009365	lsm11	61	32.864	Mola_mola
ENSCSAVG00000011571	-	98	32.759	ENSPMGG00000020709	lsm11	85	32.759	Periophthalmus_magnuspinnatus
ENSCSAVG00000011571	-	98	30.389	ENSPFOG00000000512	lsm11	86	30.389	Poecilia_formosa
ENSCSAVG00000011571	-	98	31.095	ENSPLAG00000019434	lsm11	88	31.095	Poecilia_latipinna
ENSCSAVG00000011571	-	98	30.605	ENSPREG00000019696	lsm11	78	30.605	Poecilia_reticulata