EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011619 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2118 bases
Position: chrreftig_19:5125646-5127763
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019793	tRNA-synt_1g	PF09334.11	1.8e-88	1	1
ENSCSAVP00000019794	tRNA-synt_1g	PF09334.11	9.3e-85	1	1
ENSCSAVP00000019793	tRNA-synt_1	PF00133.22	7.5e-11	1	1
ENSCSAVP00000019794	tRNA-synt_1	PF00133.22	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000020006	-	1620	-	ENSCSAVP00000019793	539 (aa)	-	H2ZQC7
ENSCSAVT00000020007	-	1545	-	ENSCSAVP00000019794	515 (aa)	-	H2ZQC8

Gene Model

Click here to download ENSCSAVG00000011619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011619	-	99	46.097	ENSG00000247626	MARS2	90	46.097	Homo_sapiens
ENSCSAVG00000011619	-	99	46.852	ENSAPOG00000013656	mars2	89	46.852	Acanthochromis_polyacanthus
ENSCSAVG00000011619	-	99	45.149	ENSAMEG00000019748	MARS2	90	45.149	Ailuropoda_melanoleuca
ENSCSAVG00000011619	-	99	46.580	ENSACIG00000014134	mars2	91	46.580	Amphilophus_citrinellus
ENSCSAVG00000011619	-	99	46.939	ENSAOCG00000018305	mars2	90	46.939	Amphiprion_ocellaris
ENSCSAVG00000011619	-	99	47.124	ENSAPEG00000004704	mars2	90	47.124	Amphiprion_percula
ENSCSAVG00000011619	-	99	45.640	ENSATEG00000000690	mars2	90	45.640	Anabas_testudineus
ENSCSAVG00000011619	-	97	45.455	ENSACAG00000008856	MARS2	98	45.455	Anolis_carolinensis
ENSCSAVG00000011619	-	99	44.981	ENSANAG00000001001	MARS2	90	44.981	Aotus_nancymaae
ENSCSAVG00000011619	-	99	46.296	ENSACLG00000002370	mars2	89	46.296	Astatotilapia_calliptera
ENSCSAVG00000011619	-	99	46.555	ENSAMXG00000011610	mars2	87	46.555	Astyanax_mexicanus
ENSCSAVG00000011619	-	99	44.981	ENSBTAG00000002056	MARS2	90	44.981	Bos_taurus
ENSCSAVG00000011619	-	99	45.725	ENSCJAG00000022885	MARS2	90	45.725	Callithrix_jacchus
ENSCSAVG00000011619	-	99	45.083	ENSCAFG00000024359	MARS2	90	45.083	Canis_familiaris
ENSCSAVG00000011619	-	99	45.083	ENSCAFG00020004676	MARS2	64	45.083	Canis_lupus_dingo
ENSCSAVG00000011619	-	99	44.610	ENSCHIG00000016548	MARS2	92	44.610	Capra_hircus
ENSCSAVG00000011619	-	99	44.981	ENSCPOG00000025973	MARS2	90	44.981	Cavia_porcellus
ENSCSAVG00000011619	-	99	45.353	ENSCCAG00000019937	MARS2	90	45.353	Cebus_capucinus
ENSCSAVG00000011619	-	99	45.911	ENSCATG00000001827	MARS2	87	45.911	Cercocebus_atys
ENSCSAVG00000011619	-	99	43.551	ENSCLAG00000010386	MARS2	90	43.551	Chinchilla_lanigera
ENSCSAVG00000011619	-	99	46.097	ENSCSAG00000018765	MARS2	90	46.097	Chlorocebus_sabaeus
ENSCSAVG00000011619	-	99	41.805	ENSCHOG00000012068	MARS2	91	41.805	Choloepus_hoffmanni
ENSCSAVG00000011619	-	100	45.772	ENSCPBG00000012041	MARS2	93	45.772	Chrysemys_picta_bellii
ENSCSAVG00000011619	-	99	74.854	ENSCING00000005183	-	91	77.059	Ciona_intestinalis
ENSCSAVG00000011619	-	99	46.283	ENSCANG00000038503	MARS2	90	46.283	Colobus_angolensis_palliatus
ENSCSAVG00000011619	-	99	46.654	ENSCGRG00001010364	Mars2	91	46.654	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011619	-	99	46.654	ENSCGRG00000019118	Mars2	91	46.654	Cricetulus_griseus_crigri
ENSCSAVG00000011619	-	99	45.911	ENSCSEG00000002875	mars2	92	45.911	Cynoglossus_semilaevis
ENSCSAVG00000011619	-	99	47.037	ENSCVAG00000004559	mars2	92	47.037	Cyprinodon_variegatus
ENSCSAVG00000011619	-	99	46.296	ENSDARG00000009218	mars2	89	46.296	Danio_rerio
ENSCSAVG00000011619	-	99	44.424	ENSDNOG00000041522	MARS2	91	44.424	Dasypus_novemcinctus
ENSCSAVG00000011619	-	87	43.617	ENSDORG00000010789	Mars2	92	43.617	Dipodomys_ordii
ENSCSAVG00000011619	-	100	44.808	FBgn0027083	MetRS-m	91	44.322	Drosophila_melanogaster
ENSCSAVG00000011619	-	74	45.946	ENSETEG00000004697	MARS2	68	45.946	Echinops_telfairi
ENSCSAVG00000011619	-	55	44.156	ENSEBUG00000009906	MARS2	74	44.156	Eptatretus_burgeri
ENSCSAVG00000011619	-	99	45.353	ENSEASG00005020133	MARS2	90	45.353	Equus_asinus_asinus
ENSCSAVG00000011619	-	99	45.353	ENSECAG00000004931	MARS2	75	45.353	Equus_caballus
ENSCSAVG00000011619	-	99	47.037	ENSELUG00000016227	mars2	88	47.037	Esox_lucius
ENSCSAVG00000011619	-	99	44.610	ENSFCAG00000009491	MARS2	90	44.610	Felis_catus
ENSCSAVG00000011619	-	91	45.090	ENSFALG00000011592	MARS2	97	45.090	Ficedula_albicollis
ENSCSAVG00000011619	-	81	46.911	ENSFDAG00000012635	MARS2	97	46.911	Fukomys_damarensis
ENSCSAVG00000011619	-	99	46.211	ENSFHEG00000014055	mars2	89	46.211	Fundulus_heteroclitus
ENSCSAVG00000011619	-	99	43.785	ENSGMOG00000011494	mars2	96	43.785	Gadus_morhua
ENSCSAVG00000011619	-	99	46.840	ENSGALG00000004019	MARS2	93	46.840	Gallus_gallus
ENSCSAVG00000011619	-	99	46.580	ENSGAFG00000001691	mars2	89	46.580	Gambusia_affinis
ENSCSAVG00000011619	-	99	46.211	ENSGACG00000017489	mars2	89	46.211	Gasterosteus_aculeatus
ENSCSAVG00000011619	-	100	45.956	ENSGAGG00000009486	MARS2	93	45.956	Gopherus_agassizii
ENSCSAVG00000011619	-	99	45.911	ENSGGOG00000034895	MARS2	90	45.911	Gorilla_gorilla
ENSCSAVG00000011619	-	99	46.481	ENSHBUG00000018278	mars2	89	46.481	Haplochromis_burtoni
ENSCSAVG00000011619	-	99	45.911	ENSHGLG00000017624	MARS2	91	45.911	Heterocephalus_glaber_female
ENSCSAVG00000011619	-	99	44.981	ENSHGLG00100009649	MARS2	91	44.981	Heterocephalus_glaber_male
ENSCSAVG00000011619	-	99	45.776	ENSHCOG00000007757	mars2	89	45.656	Hippocampus_comes
ENSCSAVG00000011619	-	99	45.988	ENSIPUG00000009852	mars2	89	45.926	Ictalurus_punctatus
ENSCSAVG00000011619	-	99	45.911	ENSSTOG00000015451	MARS2	91	45.911	Ictidomys_tridecemlineatus
ENSCSAVG00000011619	-	99	45.693	ENSJJAG00000023940	Mars2	91	45.693	Jaculus_jaculus
ENSCSAVG00000011619	-	99	46.580	ENSKMAG00000019760	mars2	89	46.580	Kryptolebias_marmoratus
ENSCSAVG00000011619	-	99	45.370	ENSLBEG00000003607	mars2	89	45.370	Labrus_bergylta
ENSCSAVG00000011619	-	99	46.468	ENSLACG00000007705	MARS2	90	46.468	Latimeria_chalumnae
ENSCSAVG00000011619	-	75	49.351	ENSLOCG00000015357	mars2	87	51.187	Lepisosteus_oculatus
ENSCSAVG00000011619	-	99	45.911	ENSLAFG00000030667	MARS2	90	45.911	Loxodonta_africana
ENSCSAVG00000011619	-	99	45.725	ENSMFAG00000012275	MARS2	90	45.725	Macaca_fascicularis
ENSCSAVG00000011619	-	99	45.911	ENSMMUG00000023810	MARS2	90	45.911	Macaca_mulatta
ENSCSAVG00000011619	-	99	45.911	ENSMNEG00000019593	MARS2	87	45.911	Macaca_nemestrina
ENSCSAVG00000011619	-	99	45.911	ENSMLEG00000023045	MARS2	90	45.911	Mandrillus_leucophaeus
ENSCSAVG00000011619	-	99	46.211	ENSMAMG00000019576	mars2	90	46.211	Mastacembelus_armatus
ENSCSAVG00000011619	-	99	46.296	ENSMZEG00005008469	mars2	89	46.296	Maylandia_zebra
ENSCSAVG00000011619	-	99	46.840	ENSMGAG00000001828	MARS2	98	46.840	Meleagris_gallopavo
ENSCSAVG00000011619	-	99	46.455	ENSMAUG00000017224	Mars2	91	46.455	Mesocricetus_auratus
ENSCSAVG00000011619	-	99	46.269	ENSMOCG00000006676	Mars2	92	46.269	Microtus_ochrogaster
ENSCSAVG00000011619	-	99	44.362	ENSMMOG00000004128	mars2	92	44.362	Mola_mola
ENSCSAVG00000011619	-	99	44.936	ENSMODG00000024604	MARS2	96	44.936	Monodelphis_domestica
ENSCSAVG00000011619	-	99	46.481	ENSMALG00000007538	mars2	88	46.481	Monopterus_albus
ENSCSAVG00000011619	-	99	45.725	MGP_CAROLIEiJ_G0014147	Mars2	91	45.725	Mus_caroli
ENSCSAVG00000011619	-	99	45.725	ENSMUSG00000046994	Mars2	91	45.725	Mus_musculus
ENSCSAVG00000011619	-	99	46.097	MGP_PahariEiJ_G0027386	Mars2	91	46.097	Mus_pahari
ENSCSAVG00000011619	-	99	45.725	MGP_SPRETEiJ_G0014953	Mars2	91	45.725	Mus_spretus
ENSCSAVG00000011619	-	99	44.981	ENSMPUG00000019823	MARS2	90	44.981	Mustela_putorius_furo
ENSCSAVG00000011619	-	99	45.353	ENSNGAG00000018031	Mars2	93	45.353	Nannospalax_galili
ENSCSAVG00000011619	-	99	46.296	ENSNBRG00000012114	mars2	91	46.296	Neolamprologus_brichardi
ENSCSAVG00000011619	-	99	46.468	ENSNLEG00000018752	MARS2	90	46.468	Nomascus_leucogenys
ENSCSAVG00000011619	-	99	43.094	ENSMEUG00000000590	MARS2	91	43.094	Notamacropus_eugenii
ENSCSAVG00000011619	-	99	47.037	ENSONIG00000002473	mars2	89	47.037	Oreochromis_niloticus
ENSCSAVG00000011619	-	99	45.911	ENSOCUG00000017798	MARS2	90	45.911	Oryctolagus_cuniculus
ENSCSAVG00000011619	-	99	46.654	ENSORLG00000000799	mars2	91	46.654	Oryzias_latipes
ENSCSAVG00000011619	-	99	46.283	ENSORLG00020004562	mars2	91	46.283	Oryzias_latipes_hni
ENSCSAVG00000011619	-	99	46.840	ENSORLG00015013596	mars2	91	46.840	Oryzias_latipes_hsok
ENSCSAVG00000011619	-	99	46.593	ENSOMEG00000013859	mars2	90	46.593	Oryzias_melastigma
ENSCSAVG00000011619	-	99	45.370	ENSOGAG00000007205	MARS2	90	45.370	Otolemur_garnettii
ENSCSAVG00000011619	-	99	44.898	ENSOARG00000015634	MARS2	91	44.751	Ovis_aries
ENSCSAVG00000011619	-	99	45.941	ENSPPAG00000007220	MARS2	91	45.941	Pan_paniscus
ENSCSAVG00000011619	-	99	44.981	ENSPPRG00000018464	MARS2	90	44.981	Panthera_pardus
ENSCSAVG00000011619	-	99	45.941	ENSPTRG00000047853	MARS2	91	45.941	Pan_troglodytes
ENSCSAVG00000011619	-	99	46.011	ENSPANG00000016544	MARS2	90	46.011	Papio_anubis
ENSCSAVG00000011619	-	99	44.693	ENSPKIG00000021425	mars2	89	44.693	Paramormyrops_kingsleyae
ENSCSAVG00000011619	-	92	46.386	ENSPSIG00000009657	MARS2	97	46.386	Pelodiscus_sinensis
ENSCSAVG00000011619	-	99	45.880	ENSPMGG00000020811	mars2	96	45.880	Periophthalmus_magnuspinnatus
ENSCSAVG00000011619	-	99	47.026	ENSPEMG00000008377	Mars2	91	47.026	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011619	-	99	43.831	ENSPMAG00000004222	mars2	97	43.831	Petromyzon_marinus
ENSCSAVG00000011619	-	99	44.015	ENSPCIG00000010610	MARS2	85	44.383	Phascolarctos_cinereus
ENSCSAVG00000011619	-	99	46.950	ENSPFOG00000000782	mars2	89	46.950	Poecilia_formosa
ENSCSAVG00000011619	-	99	46.765	ENSPLAG00000003992	mars2	89	46.765	Poecilia_latipinna
ENSCSAVG00000011619	-	99	46.950	ENSPMEG00000016916	mars2	89	46.950	Poecilia_mexicana
ENSCSAVG00000011619	-	99	46.950	ENSPREG00000012744	mars2	90	46.950	Poecilia_reticulata
ENSCSAVG00000011619	-	99	46.097	ENSPPYG00000013049	MARS2	90	46.097	Pongo_abelii
ENSCSAVG00000011619	-	80	43.852	ENSPVAG00000015267	MARS2	72	43.852	Pteropus_vampyrus
ENSCSAVG00000011619	-	99	46.382	ENSPNYG00000009085	mars2	89	46.382	Pundamilia_nyererei
ENSCSAVG00000011619	-	99	46.097	ENSPNAG00000017691	mars2	93	46.097	Pygocentrus_nattereri
ENSCSAVG00000011619	-	99	46.097	ENSRNOG00000048668	LOC100911305	91	46.097	Rattus_norvegicus
ENSCSAVG00000011619	-	99	46.097	ENSRNOG00000050002	Mars2	91	46.097	Rattus_norvegicus
ENSCSAVG00000011619	-	99	46.097	ENSRBIG00000018803	MARS2	90	46.097	Rhinopithecus_bieti
ENSCSAVG00000011619	-	99	46.097	ENSRROG00000012594	MARS2	90	46.097	Rhinopithecus_roxellana
ENSCSAVG00000011619	-	98	34.918	YGR171C	MSM1	91	35.662	Saccharomyces_cerevisiae
ENSCSAVG00000011619	-	99	45.353	ENSSBOG00000016226	MARS2	90	45.353	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011619	-	99	43.551	ENSSHAG00000017980	MARS2	97	43.551	Sarcophilus_harrisii
ENSCSAVG00000011619	-	99	45.826	ENSSFOG00015004532	mars2	91	45.826	Scleropages_formosus
ENSCSAVG00000011619	-	99	47.124	ENSSMAG00000012289	mars2	89	47.124	Scophthalmus_maximus
ENSCSAVG00000011619	-	99	46.396	ENSSDUG00000004847	mars2	89	46.396	Seriola_dumerili
ENSCSAVG00000011619	-	99	46.211	ENSSLDG00000004117	mars2	90	46.211	Seriola_lalandi_dorsalis
ENSCSAVG00000011619	-	99	44.424	ENSSARG00000004616	MARS2	91	44.177	Sorex_araneus
ENSCSAVG00000011619	-	99	45.455	ENSSPUG00000005569	MARS2	91	45.455	Sphenodon_punctatus
ENSCSAVG00000011619	-	99	46.296	ENSSPAG00000001547	mars2	89	46.296	Stegastes_partitus
ENSCSAVG00000011619	-	99	44.796	ENSSSCG00000034494	MARS2	93	44.796	Sus_scrofa
ENSCSAVG00000011619	-	91	45.875	ENSTGUG00000005225	MARS2	98	45.875	Taeniopygia_guttata
ENSCSAVG00000011619	-	100	46.580	ENSTRUG00000012627	mars2	89	46.580	Takifugu_rubripes
ENSCSAVG00000011619	-	100	45.471	ENSTNIG00000015747	mars2	92	45.471	Tetraodon_nigroviridis
ENSCSAVG00000011619	-	99	45.353	ENSTTRG00000003421	MARS2	90	45.353	Tursiops_truncatus
ENSCSAVG00000011619	-	99	45.167	ENSUAMG00000009131	MARS2	91	45.167	Ursus_americanus
ENSCSAVG00000011619	-	99	41.045	ENSUMAG00000020961	MARS2	91	41.045	Ursus_maritimus
ENSCSAVG00000011619	-	99	45.167	ENSVVUG00000025921	MARS2	90	45.167	Vulpes_vulpes
ENSCSAVG00000011619	-	100	39.926	ENSXETG00000018187	mars2	92	39.926	Xenopus_tropicalis
ENSCSAVG00000011619	-	99	46.950	ENSXCOG00000016798	mars2	92	46.950	Xiphophorus_couchianus
ENSCSAVG00000011619	-	99	46.580	ENSXMAG00000000296	mars2	89	46.580	Xiphophorus_maculatus