EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011717 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3572 bases
Position: chrreftig_1:5666763-5670334
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019975	INTS2	PF14750.6	0	1	1
ENSCSAVP00000019976	INTS2	PF14750.6	0	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000020190	-	2946	-	ENSCSAVP00000019976	982 (aa)	-	H2ZQW0
ENSCSAVT00000020189	-	2910	-	ENSCSAVP00000019975	970 (aa)	-	H2ZQV9

Gene Model

Click here to download ENSCSAVG00000011717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011717's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011717	-	99	41.578	ENSG00000108506	INTS2	94	44.795	Homo_sapiens
ENSCSAVG00000011717	-	99	40.306	ENSAPOG00000008035	ints2	86	40.190	Acanthochromis_polyacanthus
ENSCSAVG00000011717	-	99	41.522	ENSAMEG00000008767	INTS2	85	41.522	Ailuropoda_melanoleuca
ENSCSAVG00000011717	-	99	40.096	ENSACIG00000004348	ints2	85	40.096	Amphilophus_citrinellus
ENSCSAVG00000011717	-	99	40.306	ENSAOCG00000005547	ints2	85	40.306	Amphiprion_ocellaris
ENSCSAVG00000011717	-	99	40.344	ENSAPEG00000015071	ints2	95	44.056	Amphiprion_percula
ENSCSAVG00000011717	-	99	39.962	ENSATEG00000003724	ints2	86	39.249	Anabas_testudineus
ENSCSAVG00000011717	-	99	41.715	ENSAPLG00000009449	INTS2	85	41.811	Anas_platyrhynchos
ENSCSAVG00000011717	-	55	44.424	ENSACAG00000013143	INTS2	94	44.424	Anolis_carolinensis
ENSCSAVG00000011717	-	99	41.867	ENSANAG00000027163	INTS2	86	41.867	Aotus_nancymaae
ENSCSAVG00000011717	-	99	40.401	ENSACLG00000026142	ints2	85	40.401	Astatotilapia_calliptera
ENSCSAVG00000011717	-	99	42.562	ENSBTAG00000012070	INTS2	97	40.830	Bos_taurus
ENSCSAVG00000011717	-	99	41.867	ENSCJAG00000001324	INTS2	85	41.867	Callithrix_jacchus
ENSCSAVG00000011717	-	99	41.578	ENSCAFG00000017724	INTS2	85	41.578	Canis_familiaris
ENSCSAVG00000011717	-	99	41.578	ENSCAFG00020001542	INTS2	85	41.578	Canis_lupus_dingo
ENSCSAVG00000011717	-	99	41.578	ENSCHIG00000025276	INTS2	85	41.578	Capra_hircus
ENSCSAVG00000011717	-	99	41.675	ENSTSYG00000011050	INTS2	85	41.675	Carlito_syrichta
ENSCSAVG00000011717	-	89	36.836	ENSCAPG00000013390	INTS2	80	36.836	Cavia_aperea
ENSCSAVG00000011717	-	99	41.755	ENSCPOG00000011664	INTS2	85	41.755	Cavia_porcellus
ENSCSAVG00000011717	-	99	41.963	ENSCCAG00000035119	INTS2	85	41.963	Cebus_capucinus
ENSCSAVG00000011717	-	99	41.675	ENSCATG00000005965	INTS2	86	41.675	Cercocebus_atys
ENSCSAVG00000011717	-	99	41.779	ENSCLAG00000013460	INTS2	85	41.779	Chinchilla_lanigera
ENSCSAVG00000011717	-	99	41.578	ENSCSAG00000005911	INTS2	86	41.578	Chlorocebus_sabaeus
ENSCSAVG00000011717	-	89	46.789	ENSCHOG00000012125	INTS2	76	46.789	Choloepus_hoffmanni
ENSCSAVG00000011717	-	99	41.755	ENSCPBG00000009362	INTS2	86	40.965	Chrysemys_picta_bellii
ENSCSAVG00000011717	-	99	75.101	ENSCING00000008614	-	91	75.101	Ciona_intestinalis
ENSCSAVG00000011717	-	99	40.077	ENSCANG00000040791	INTS2	85	40.077	Colobus_angolensis_palliatus
ENSCSAVG00000011717	-	99	41.691	ENSCGRG00001004999	Ints2	85	41.691	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011717	-	99	41.691	ENSCGRG00000001448	-	85	41.691	Cricetulus_griseus_crigri
ENSCSAVG00000011717	-	99	40.210	ENSCSEG00000011730	ints2	87	39.846	Cynoglossus_semilaevis
ENSCSAVG00000011717	-	99	40.000	ENSCVAG00000014735	ints2	85	40.000	Cyprinodon_variegatus
ENSCSAVG00000011717	-	99	40.879	ENSDARG00000069085	ints2	84	43.972	Danio_rerio
ENSCSAVG00000011717	-	99	42.278	ENSDNOG00000008076	INTS2	86	42.278	Dasypus_novemcinctus
ENSCSAVG00000011717	-	99	40.116	ENSDORG00000009302	Ints2	85	40.116	Dipodomys_ordii
ENSCSAVG00000011717	-	99	35.614	FBgn0030858	IntS2	87	35.614	Drosophila_melanogaster
ENSCSAVG00000011717	-	58	48.113	ENSETEG00000004817	-	50	48.113	Echinops_telfairi
ENSCSAVG00000011717	-	98	38.168	ENSEBUG00000014395	ints2	84	38.168	Eptatretus_burgeri
ENSCSAVG00000011717	-	99	41.988	ENSECAG00000020839	INTS2	84	41.988	Equus_caballus
ENSCSAVG00000011717	-	99	40.688	ENSELUG00000023402	ints2	85	40.918	Esox_lucius
ENSCSAVG00000011717	-	99	41.675	ENSFCAG00000028418	INTS2	86	41.675	Felis_catus
ENSCSAVG00000011717	-	99	41.659	ENSFALG00000005505	INTS2	85	41.755	Ficedula_albicollis
ENSCSAVG00000011717	-	99	42.070	ENSFDAG00000014605	INTS2	85	42.070	Fukomys_damarensis
ENSCSAVG00000011717	-	99	39.904	ENSFHEG00000015234	ints2	85	39.904	Fundulus_heteroclitus
ENSCSAVG00000011717	-	99	39.922	ENSGMOG00000012241	ints2	85	40.213	Gadus_morhua
ENSCSAVG00000011717	-	99	41.836	ENSGALG00000005269	INTS2	85	41.836	Gallus_gallus
ENSCSAVG00000011717	-	99	40.327	ENSGAFG00000015576	ints2	85	40.327	Gambusia_affinis
ENSCSAVG00000011717	-	99	40.096	ENSGACG00000020212	ints2	85	40.096	Gasterosteus_aculeatus
ENSCSAVG00000011717	-	99	41.851	ENSGAGG00000003837	INTS2	85	41.827	Gopherus_agassizii
ENSCSAVG00000011717	-	99	41.618	ENSGGOG00000004385	INTS2	86	41.618	Gorilla_gorilla
ENSCSAVG00000011717	-	99	40.230	ENSHBUG00000018293	ints2	92	44.755	Haplochromis_burtoni
ENSCSAVG00000011717	-	99	41.851	ENSHGLG00000009029	INTS2	85	41.851	Heterocephalus_glaber_female
ENSCSAVG00000011717	-	99	41.851	ENSHGLG00100015189	INTS2	86	41.851	Heterocephalus_glaber_male
ENSCSAVG00000011717	-	99	39.790	ENSHCOG00000012559	ints2	85	39.790	Hippocampus_comes
ENSCSAVG00000011717	-	98	39.981	ENSIPUG00000019153	INTS2	89	39.981	Ictalurus_punctatus
ENSCSAVG00000011717	-	99	41.482	ENSSTOG00000011102	INTS2	85	41.482	Ictidomys_tridecemlineatus
ENSCSAVG00000011717	-	99	41.595	ENSJJAG00000003384	Ints2	85	41.595	Jaculus_jaculus
ENSCSAVG00000011717	-	99	40.287	ENSKMAG00000001184	ints2	85	40.287	Kryptolebias_marmoratus
ENSCSAVG00000011717	-	99	39.904	ENSLBEG00000013486	ints2	85	39.904	Labrus_bergylta
ENSCSAVG00000011717	-	99	41.096	ENSLACG00000013445	INTS2	85	40.940	Latimeria_chalumnae
ENSCSAVG00000011717	-	99	41.193	ENSLOCG00000003709	ints2	86	41.193	Lepisosteus_oculatus
ENSCSAVG00000011717	-	99	41.643	ENSLAFG00000021978	INTS2	85	41.643	Loxodonta_africana
ENSCSAVG00000011717	-	99	41.482	ENSMFAG00000017924	INTS2	85	41.482	Macaca_fascicularis
ENSCSAVG00000011717	-	99	41.578	ENSMMUG00000007242	INTS2	86	41.578	Macaca_mulatta
ENSCSAVG00000011717	-	99	39.904	ENSMNEG00000035838	INTS2	85	39.962	Macaca_nemestrina
ENSCSAVG00000011717	-	99	41.618	ENSMLEG00000029051	INTS2	86	41.284	Mandrillus_leucophaeus
ENSCSAVG00000011717	-	99	40.440	ENSMAMG00000004802	ints2	85	40.440	Mastacembelus_armatus
ENSCSAVG00000011717	-	99	40.401	ENSMZEG00005023345	ints2	85	40.401	Maylandia_zebra
ENSCSAVG00000011717	-	99	41.216	ENSMGAG00000007537	INTS2	85	41.216	Meleagris_gallopavo
ENSCSAVG00000011717	-	99	41.731	ENSMAUG00000016751	Ints2	86	41.731	Mesocricetus_auratus
ENSCSAVG00000011717	-	99	41.755	ENSMICG00000016853	INTS2	86	41.755	Microcebus_murinus
ENSCSAVG00000011717	-	99	41.691	ENSMOCG00000022017	Ints2	85	41.691	Microtus_ochrogaster
ENSCSAVG00000011717	-	98	40.698	ENSMMOG00000005826	ints2	85	40.698	Mola_mola
ENSCSAVG00000011717	-	99	41.489	ENSMODG00000014273	INTS2	85	41.426	Monodelphis_domestica
ENSCSAVG00000011717	-	99	40.038	ENSMALG00000002108	ints2	85	40.229	Monopterus_albus
ENSCSAVG00000011717	-	99	41.193	MGP_CAROLIEiJ_G0016912	Ints2	94	49.451	Mus_caroli
ENSCSAVG00000011717	-	99	41.306	ENSMUSG00000018068	Ints2	94	49.451	Mus_musculus
ENSCSAVG00000011717	-	99	39.664	MGP_PahariEiJ_G0018042	Ints2	99	44.920	Mus_pahari
ENSCSAVG00000011717	-	99	41.210	MGP_SPRETEiJ_G0017757	Ints2	94	49.451	Mus_spretus
ENSCSAVG00000011717	-	85	41.507	ENSMPUG00000015171	INTS2	83	41.507	Mustela_putorius_furo
ENSCSAVG00000011717	-	99	41.482	ENSMLUG00000003877	INTS2	85	41.482	Myotis_lucifugus
ENSCSAVG00000011717	-	99	41.506	ENSNGAG00000017259	Ints2	85	41.506	Nannospalax_galili
ENSCSAVG00000011717	-	99	40.479	ENSNBRG00000018077	ints2	92	44.755	Neolamprologus_brichardi
ENSCSAVG00000011717	-	99	41.675	ENSNLEG00000000462	INTS2	85	41.675	Nomascus_leucogenys
ENSCSAVG00000011717	-	65	50.000	ENSMEUG00000006657	-	56	50.000	Notamacropus_eugenii
ENSCSAVG00000011717	-	92	39.893	ENSOPRG00000005282	INTS2	77	39.830	Ochotona_princeps
ENSCSAVG00000011717	-	98	41.504	ENSODEG00000013812	INTS2	87	41.319	Octodon_degus
ENSCSAVG00000011717	-	99	40.210	ENSONIG00000017550	ints2	85	40.210	Oreochromis_niloticus
ENSCSAVG00000011717	-	99	41.731	ENSOANG00000002229	INTS2	85	41.731	Ornithorhynchus_anatinus
ENSCSAVG00000011717	-	99	41.635	ENSOCUG00000006693	INTS2	85	41.635	Oryctolagus_cuniculus
ENSCSAVG00000011717	-	99	39.771	ENSORLG00000012396	ints2	85	39.771	Oryzias_latipes
ENSCSAVG00000011717	-	99	39.771	ENSORLG00020014962	ints2	85	39.771	Oryzias_latipes_hni
ENSCSAVG00000011717	-	99	39.484	ENSORLG00015021803	ints2	85	39.484	Oryzias_latipes_hsok
ENSCSAVG00000011717	-	98	39.922	ENSOMEG00000017250	ints2	85	40.019	Oryzias_melastigma
ENSCSAVG00000011717	-	99	40.288	ENSOGAG00000007486	INTS2	85	40.288	Otolemur_garnettii
ENSCSAVG00000011717	-	99	41.715	ENSOARG00000015532	INTS2	81	41.715	Ovis_aries
ENSCSAVG00000011717	-	99	41.466	ENSPPAG00000043030	INTS2	99	43.328	Pan_paniscus
ENSCSAVG00000011717	-	99	41.675	ENSPPRG00000006723	INTS2	86	41.675	Panthera_pardus
ENSCSAVG00000011717	-	99	41.675	ENSPTIG00000005455	INTS2	86	41.675	Panthera_tigris_altaica
ENSCSAVG00000011717	-	99	41.715	ENSPTRG00000009496	INTS2	86	41.715	Pan_troglodytes
ENSCSAVG00000011717	-	99	41.578	ENSPANG00000022170	INTS2	85	41.578	Papio_anubis
ENSCSAVG00000011717	-	99	39.242	ENSPKIG00000020268	ints2	86	39.279	Paramormyrops_kingsleyae
ENSCSAVG00000011717	-	86	40.753	ENSPSIG00000018160	INTS2	84	40.753	Pelodiscus_sinensis
ENSCSAVG00000011717	-	99	39.885	ENSPMGG00000014520	ints2	85	39.885	Periophthalmus_magnuspinnatus
ENSCSAVG00000011717	-	99	41.787	ENSPEMG00000000802	Ints2	85	41.787	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011717	-	99	41.683	ENSPCIG00000027084	INTS2	82	41.683	Phascolarctos_cinereus
ENSCSAVG00000011717	-	99	40.058	ENSPFOG00000013081	ints2	85	40.058	Poecilia_formosa
ENSCSAVG00000011717	-	99	40.058	ENSPLAG00000007992	ints2	85	40.058	Poecilia_latipinna
ENSCSAVG00000011717	-	99	40.058	ENSPMEG00000003473	ints2	85	40.058	Poecilia_mexicana
ENSCSAVG00000011717	-	99	40.058	ENSPREG00000009357	ints2	85	40.058	Poecilia_reticulata
ENSCSAVG00000011717	-	99	39.942	ENSPPYG00000008803	INTS2	85	39.942	Pongo_abelii
ENSCSAVG00000011717	-	68	41.491	ENSPCAG00000005692	INTS2	64	41.491	Procavia_capensis
ENSCSAVG00000011717	-	99	39.981	ENSPCOG00000015040	INTS2	85	39.423	Propithecus_coquereli
ENSCSAVG00000011717	-	90	42.424	ENSPVAG00000007071	INTS2	77	42.424	Pteropus_vampyrus
ENSCSAVG00000011717	-	99	40.134	ENSPNYG00000022152	ints2	92	44.755	Pundamilia_nyererei
ENSCSAVG00000011717	-	99	38.302	ENSPNAG00000011813	ints2	85	38.396	Pygocentrus_nattereri
ENSCSAVG00000011717	-	99	41.114	ENSRNOG00000003576	Ints2	99	43.357	Rattus_norvegicus
ENSCSAVG00000011717	-	85	39.435	ENSRBIG00000037281	INTS2	83	39.642	Rhinopithecus_bieti
ENSCSAVG00000011717	-	99	41.618	ENSRROG00000026994	INTS2	86	41.284	Rhinopithecus_roxellana
ENSCSAVG00000011717	-	99	40.327	ENSSBOG00000033684	INTS2	85	40.327	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011717	-	99	42.014	ENSSHAG00000014610	INTS2	85	42.115	Sarcophilus_harrisii
ENSCSAVG00000011717	-	99	41.635	ENSSFOG00015014282	ints2	86	41.635	Scleropages_formosus
ENSCSAVG00000011717	-	99	40.019	ENSSMAG00000000829	ints2	85	40.019	Scophthalmus_maximus
ENSCSAVG00000011717	-	99	40.172	ENSSDUG00000018651	ints2	85	40.172	Seriola_dumerili
ENSCSAVG00000011717	-	99	40.172	ENSSLDG00000021035	ints2	85	40.172	Seriola_lalandi_dorsalis
ENSCSAVG00000011717	-	93	43.023	ENSSARG00000011786	INTS2	79	42.748	Sorex_araneus
ENSCSAVG00000011717	-	99	41.901	ENSSPUG00000016601	INTS2	85	41.901	Sphenodon_punctatus
ENSCSAVG00000011717	-	99	40.210	ENSSPAG00000005670	ints2	85	40.210	Stegastes_partitus
ENSCSAVG00000011717	-	99	41.811	ENSSSCG00000017673	INTS2	86	41.811	Sus_scrofa
ENSCSAVG00000011717	-	99	41.602	ENSTGUG00000007739	-	85	41.699	Taeniopygia_guttata
ENSCSAVG00000011717	-	74	39.413	ENSTGUG00000015932	-	97	39.541	Taeniopygia_guttata
ENSCSAVG00000011717	-	99	39.962	ENSTRUG00000009276	ints2	85	39.962	Takifugu_rubripes
ENSCSAVG00000011717	-	99	41.356	ENSTNIG00000011640	ints2	85	41.356	Tetraodon_nigroviridis
ENSCSAVG00000011717	-	67	44.578	ENSTBEG00000017598	INTS2	56	44.578	Tupaia_belangeri
ENSCSAVG00000011717	-	84	48.148	ENSTTRG00000004559	INTS2	71	48.148	Tursiops_truncatus
ENSCSAVG00000011717	-	82	42.381	ENSUAMG00000022956	INTS2	98	43.413	Ursus_americanus
ENSCSAVG00000011717	-	99	42.368	ENSUMAG00000022361	INTS2	98	43.413	Ursus_maritimus
ENSCSAVG00000011717	-	99	41.602	ENSVPAG00000005059	INTS2	85	41.602	Vicugna_pacos
ENSCSAVG00000011717	-	99	41.771	ENSVVUG00000018181	INTS2	85	41.771	Vulpes_vulpes
ENSCSAVG00000011717	-	99	41.332	ENSXETG00000010721	ints2	85	41.332	Xenopus_tropicalis
ENSCSAVG00000011717	-	99	40.135	ENSXCOG00000004833	ints2	85	40.135	Xiphophorus_couchianus
ENSCSAVG00000011717	-	99	40.000	ENSXMAG00000000085	ints2	89	40.000	Xiphophorus_maculatus