EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011718 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 5456 bases
Position: chrreftig_1:5676900-5682355
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000019977	La	PF05383.17	2.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000020191	-	869	-	ENSCSAVP00000019977	276 (aa)	-	H2ZQW1

Gene Model

Click here to download ENSCSAVG00000011718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011718	-	69	35.961	ENSAPOG00000003568	-	56	35.961	Acanthochromis_polyacanthus
ENSCSAVG00000011718	-	77	34.361	ENSAOCG00000004646	larp6b	57	34.361	Amphiprion_ocellaris
ENSCSAVG00000011718	-	77	34.802	ENSAPEG00000022748	-	56	34.802	Amphiprion_percula
ENSCSAVG00000011718	-	87	35.943	ENSAMXG00000018956	larp6b	53	37.743	Astyanax_mexicanus
ENSCSAVG00000011718	-	99	79.866	ENSCING00000008613	-	61	79.866	Ciona_intestinalis
ENSCSAVG00000011718	-	72	33.333	ENSCING00000024994	-	72	33.333	Ciona_intestinalis
ENSCSAVG00000011718	-	79	34.247	ENSCING00000018361	-	77	34.247	Ciona_intestinalis
ENSCSAVG00000011718	-	80	40.756	ENSDARG00000003968	larp6b	90	46.281	Danio_rerio
ENSCSAVG00000011718	-	84	40.254	ENSELUG00000021677	larp6b	50	40.254	Esox_lucius
ENSCSAVG00000011718	-	86	38.996	ENSIPUG00000007609	larp6b	55	38.996	Ictalurus_punctatus
ENSCSAVG00000011718	-	70	39.151	ENSLBEG00000016460	-	50	40.984	Labrus_bergylta
ENSCSAVG00000011718	-	80	38.655	ENSPKIG00000025605	larp6b	53	36.434	Paramormyrops_kingsleyae
ENSCSAVG00000011718	-	61	38.764	ENSPMEG00000019947	-	50	38.764	Poecilia_mexicana
ENSCSAVG00000011718	-	84	38.153	ENSPNAG00000023854	larp6b	51	38.153	Pygocentrus_nattereri
ENSCSAVG00000011718	-	65	37.629	ENSSDUG00000009842	-	58	37.629	Seriola_dumerili