EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011750 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3252 bases
Position: chrreftig_1:5985708-5988959
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000020018	DUF2040	PF09745.9	3.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000020232	-	772	-	ENSCSAVP00000020018	206 (aa)	-	H2ZR02

Gene Model

Click here to download ENSCSAVG00000011750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011750	-	96	54.774	ENSG00000126653	NSRP1	97	63.077	Homo_sapiens
ENSCSAVG00000011750	-	96	51.777	ENSAOCG00000011727	nsrp1	55	51.777	Amphiprion_ocellaris
ENSCSAVG00000011750	-	71	39.597	WBGene00007627	ccdc-55	50	36.408	Caenorhabditis_elegans
ENSCSAVG00000011750	-	99	80.645	ENSCING00000015091	-	52	80.645	Ciona_intestinalis
ENSCSAVG00000011750	-	96	33.971	FBgn0030474	CG15747	51	33.971	Drosophila_melanogaster
ENSCSAVG00000011750	-	98	53.234	ENSHCOG00000009930	nsrp1	51	53.769	Hippocampus_comes
ENSCSAVG00000011750	-	98	52.736	MGP_CAROLIEiJ_G0016769	Nsrp1	97	51.250	Mus_caroli
ENSCSAVG00000011750	-	96	52.475	ENSMUSG00000037958	Nsrp1	97	51.852	Mus_musculus
ENSCSAVG00000011750	-	96	53.266	MGP_PahariEiJ_G0017906	Nsrp1	96	52.500	Mus_pahari
ENSCSAVG00000011750	-	96	51.980	MGP_SPRETEiJ_G0017612	-	97	51.852	Mus_spretus
ENSCSAVG00000011750	-	96	48.731	ENSNBRG00000009326	nsrp1	62	48.731	Neolamprologus_brichardi
ENSCSAVG00000011750	-	99	50.000	ENSTNIG00000016161	nsrp1	61	50.000	Tetraodon_nigroviridis