EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011751 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 17627 bases
Position: chrreftig_1:5992512-6010138
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000020021	IBN_N	PF03810.19	2.2e-16	1	1
ENSCSAVP00000020022	IBN_N	PF03810.19	2.2e-16	1	1
ENSCSAVP00000020020	IBN_N	PF03810.19	2.2e-16	1	1
ENSCSAVP00000020019	IBN_N	PF03810.19	2.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000020233	-	3312	-	ENSCSAVP00000020019	1091 (aa)	-	H2ZR03
ENSCSAVT00000020235	-	3444	-	ENSCSAVP00000020021	1044 (aa)	-	H2ZR05
ENSCSAVT00000020234	-	3586	-	ENSCSAVP00000020020	1049 (aa)	-	H2ZR04
ENSCSAVT00000020237	-	1199	-	ENSCSAVP00000020023	237 (aa)	-	H2ZR07
ENSCSAVT00000020236	-	3623	-	ENSCSAVP00000020022	1057 (aa)	-	H2ZR06

Gene Model

Click here to download ENSCSAVG00000011751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011751's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011751	-	99	55.268	ENSG00000205339	IPO7	99	55.077	Homo_sapiens
ENSCSAVG00000011751	-	99	54.398	ENSAPOG00000014238	ipo7	99	54.398	Acanthochromis_polyacanthus
ENSCSAVG00000011751	-	99	55.067	ENSAMEG00000003914	IPO7	99	54.876	Ailuropoda_melanoleuca
ENSCSAVG00000011751	-	99	51.718	ENSACIG00000000608	ipo7	99	51.820	Amphilophus_citrinellus
ENSCSAVG00000011751	-	99	54.398	ENSAOCG00000009342	ipo7	99	54.398	Amphiprion_ocellaris
ENSCSAVG00000011751	-	99	54.398	ENSAPEG00000009820	ipo7	99	54.398	Amphiprion_percula
ENSCSAVG00000011751	-	99	54.580	ENSATEG00000006501	ipo7	99	54.398	Anabas_testudineus
ENSCSAVG00000011751	-	97	54.912	ENSAPLG00000016161	IPO7	99	54.617	Anas_platyrhynchos
ENSCSAVG00000011751	-	99	55.258	ENSACAG00000009452	IPO7	99	55.163	Anolis_carolinensis
ENSCSAVG00000011751	-	99	55.268	ENSANAG00000037854	IPO7	99	55.077	Aotus_nancymaae
ENSCSAVG00000011751	-	99	54.971	ENSACLG00000027247	ipo7	99	54.685	Astatotilapia_calliptera
ENSCSAVG00000011751	-	62	48.313	ENSACLG00000026148	-	92	48.313	Astatotilapia_calliptera
ENSCSAVG00000011751	-	99	49.523	ENSAMXG00000009895	ipo7	99	49.427	Astyanax_mexicanus
ENSCSAVG00000011751	-	99	55.268	ENSBTAG00000027722	IPO7	99	54.981	Bos_taurus
ENSCSAVG00000011751	-	99	55.268	ENSCJAG00000011395	IPO7	99	55.077	Callithrix_jacchus
ENSCSAVG00000011751	-	99	55.268	ENSCAFG00000007259	IPO7	99	55.077	Canis_familiaris
ENSCSAVG00000011751	-	96	55.644	ENSCAFG00020011426	IPO7	99	55.445	Canis_lupus_dingo
ENSCSAVG00000011751	-	99	55.077	ENSCHIG00000024527	IPO7	99	54.789	Capra_hircus
ENSCSAVG00000011751	-	99	55.172	ENSTSYG00000004959	IPO7	99	54.981	Carlito_syrichta
ENSCSAVG00000011751	-	99	55.460	ENSCPOG00000013623	IPO7	99	55.268	Cavia_porcellus
ENSCSAVG00000011751	-	85	59.138	ENSCCAG00000020955	IPO7	99	59.483	Cebus_capucinus
ENSCSAVG00000011751	-	99	52.111	ENSCATG00000042452	IPO7	99	52.015	Cercocebus_atys
ENSCSAVG00000011751	-	99	55.364	ENSCLAG00000015913	IPO7	99	55.460	Chinchilla_lanigera
ENSCSAVG00000011751	-	99	55.268	ENSCSAG00000004504	IPO7	99	55.077	Chlorocebus_sabaeus
ENSCSAVG00000011751	-	99	55.962	ENSCPBG00000022842	IPO7	97	55.854	Chrysemys_picta_bellii
ENSCSAVG00000011751	-	99	80.722	ENSCING00000008592	-	100	80.694	Ciona_intestinalis
ENSCSAVG00000011751	-	96	55.531	ENSCANG00000032804	IPO7	99	55.531	Colobus_angolensis_palliatus
ENSCSAVG00000011751	-	99	55.449	ENSCGRG00001019770	Ipo7	99	55.258	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011751	-	99	55.449	ENSCGRG00000016689	Ipo7	99	55.258	Cricetulus_griseus_crigri
ENSCSAVG00000011751	-	99	54.294	ENSCSEG00000009451	ipo7	99	54.198	Cynoglossus_semilaevis
ENSCSAVG00000011751	-	99	54.641	ENSCVAG00000017260	ipo7	99	54.354	Cyprinodon_variegatus
ENSCSAVG00000011751	-	99	54.737	ENSDARG00000035751	ipo7	99	54.450	Danio_rerio
ENSCSAVG00000011751	-	99	55.268	ENSDNOG00000016138	IPO7	99	55.077	Dasypus_novemcinctus
ENSCSAVG00000011751	-	99	55.460	ENSDORG00000013699	Ipo7	99	55.268	Dipodomys_ordii
ENSCSAVG00000011751	-	100	48.315	FBgn0026252	msk	100	48.411	Drosophila_melanogaster
ENSCSAVG00000011751	-	92	52.194	ENSETEG00000001023	IPO7	92	51.891	Echinops_telfairi
ENSCSAVG00000011751	-	90	49.200	ENSEBUG00000016040	-	99	52.908	Eptatretus_burgeri
ENSCSAVG00000011751	-	100	49.106	ENSEBUG00000003477	ipo7	99	49.666	Eptatretus_burgeri
ENSCSAVG00000011751	-	96	55.544	ENSEASG00005003575	IPO7	99	55.345	Equus_asinus_asinus
ENSCSAVG00000011751	-	99	55.268	ENSECAG00000015965	IPO7	99	55.077	Equus_caballus
ENSCSAVG00000011751	-	84	57.294	ENSEEUG00000014059	IPO7	84	56.764	Erinaceus_europaeus
ENSCSAVG00000011751	-	99	54.833	ENSELUG00000007853	ipo7	99	54.833	Esox_lucius
ENSCSAVG00000011751	-	99	55.268	ENSFCAG00000030327	IPO7	99	55.077	Felis_catus
ENSCSAVG00000011751	-	96	55.644	ENSFALG00000000979	IPO7	99	55.445	Ficedula_albicollis
ENSCSAVG00000011751	-	99	55.172	ENSFDAG00000011342	IPO7	99	55.077	Fukomys_damarensis
ENSCSAVG00000011751	-	98	51.167	ENSFHEG00000007582	ipo7	99	50.875	Fundulus_heteroclitus
ENSCSAVG00000011751	-	93	55.000	ENSGMOG00000001681	ipo7	95	70.455	Gadus_morhua
ENSCSAVG00000011751	-	99	55.364	ENSGALG00000005807	IPO7	99	55.172	Gallus_gallus
ENSCSAVG00000011751	-	99	54.737	ENSGAFG00000017037	ipo7	99	54.450	Gambusia_affinis
ENSCSAVG00000011751	-	99	54.198	ENSGACG00000015677	ipo7	99	53.920	Gasterosteus_aculeatus
ENSCSAVG00000011751	-	99	55.865	ENSGAGG00000020412	IPO7	97	55.662	Gopherus_agassizii
ENSCSAVG00000011751	-	98	55.220	ENSGGOG00000002260	IPO7	99	55.172	Gorilla_gorilla
ENSCSAVG00000011751	-	99	43.732	ENSGGOG00000026484	-	99	43.541	Gorilla_gorilla
ENSCSAVG00000011751	-	99	55.067	ENSHBUG00000017323	ipo7	99	54.780	Haplochromis_burtoni
ENSCSAVG00000011751	-	99	55.268	ENSHGLG00000005147	IPO7	99	55.172	Heterocephalus_glaber_female
ENSCSAVG00000011751	-	88	55.932	ENSHGLG00000000256	-	98	39.922	Heterocephalus_glaber_female
ENSCSAVG00000011751	-	88	55.932	ENSHGLG00100017940	-	98	39.713	Heterocephalus_glaber_male
ENSCSAVG00000011751	-	97	55.227	ENSHGLG00100013871	IPO7	99	55.128	Heterocephalus_glaber_male
ENSCSAVG00000011751	-	99	54.485	ENSHCOG00000002290	ipo7	99	54.485	Hippocampus_comes
ENSCSAVG00000011751	-	99	54.719	ENSIPUG00000020136	ipo7	99	54.615	Ictalurus_punctatus
ENSCSAVG00000011751	-	99	55.172	ENSSTOG00000009601	IPO7	99	54.981	Ictidomys_tridecemlineatus
ENSCSAVG00000011751	-	99	53.014	ENSJJAG00000018743	Ipo7	99	52.823	Jaculus_jaculus
ENSCSAVG00000011751	-	99	54.441	ENSKMAG00000004961	ipo7	99	54.163	Kryptolebias_marmoratus
ENSCSAVG00000011751	-	99	54.589	ENSLBEG00000027402	ipo7	99	54.398	Labrus_bergylta
ENSCSAVG00000011751	-	99	55.641	ENSLACG00000017593	IPO7	99	55.449	Latimeria_chalumnae
ENSCSAVG00000011751	-	99	54.728	ENSLOCG00000003606	ipo7	99	54.537	Lepisosteus_oculatus
ENSCSAVG00000011751	-	99	55.172	ENSLAFG00000014194	IPO7	99	54.981	Loxodonta_africana
ENSCSAVG00000011751	-	99	49.760	ENSMFAG00000040326	IPO7	99	52.232	Macaca_fascicularis
ENSCSAVG00000011751	-	99	50.958	ENSMMUG00000023636	IPO7	99	50.766	Macaca_mulatta
ENSCSAVG00000011751	-	99	55.268	ENSMNEG00000034866	IPO7	99	55.077	Macaca_nemestrina
ENSCSAVG00000011751	-	99	55.268	ENSMLEG00000043163	IPO7	99	55.077	Mandrillus_leucophaeus
ENSCSAVG00000011751	-	99	54.545	ENSMAMG00000021798	ipo7	99	54.163	Mastacembelus_armatus
ENSCSAVG00000011751	-	99	54.971	ENSMZEG00005015042	ipo7	99	54.685	Maylandia_zebra
ENSCSAVG00000011751	-	97	55.348	ENSMGAG00000006243	IPO7	97	55.152	Meleagris_gallopavo
ENSCSAVG00000011751	-	92	53.590	ENSMAUG00000014758	Ipo7	98	53.775	Mesocricetus_auratus
ENSCSAVG00000011751	-	99	55.268	ENSMICG00000007465	IPO7	99	55.077	Microcebus_murinus
ENSCSAVG00000011751	-	99	55.449	ENSMOCG00000005483	Ipo7	99	55.258	Microtus_ochrogaster
ENSCSAVG00000011751	-	99	52.344	ENSMMOG00000017072	ipo7	99	52.249	Mola_mola
ENSCSAVG00000011751	-	99	55.364	ENSMODG00000007836	IPO7	99	55.301	Monodelphis_domestica
ENSCSAVG00000011751	-	97	54.528	ENSMALG00000020135	ipo7	99	54.331	Monopterus_albus
ENSCSAVG00000011751	-	99	55.641	ENSMUSG00000066232	Ipo7	99	55.449	Mus_musculus
ENSCSAVG00000011751	-	99	55.268	ENSMPUG00000012785	IPO7	99	55.077	Mustela_putorius_furo
ENSCSAVG00000011751	-	99	54.814	ENSMLUG00000027687	IPO7	99	54.719	Myotis_lucifugus
ENSCSAVG00000011751	-	99	54.207	ENSNGAG00000006507	Ipo7	99	54.015	Nannospalax_galili
ENSCSAVG00000011751	-	99	55.268	ENSNLEG00000017560	IPO7	99	55.077	Nomascus_leucogenys
ENSCSAVG00000011751	-	82	57.009	ENSMEUG00000001986	IPO7	85	57.243	Notamacropus_eugenii
ENSCSAVG00000011751	-	97	54.089	ENSOPRG00000005430	IPO7	99	53.892	Ochotona_princeps
ENSCSAVG00000011751	-	99	53.295	ENSODEG00000008218	IPO7	99	52.796	Octodon_degus
ENSCSAVG00000011751	-	99	54.971	ENSONIG00000006069	ipo7	99	54.876	Oreochromis_niloticus
ENSCSAVG00000011751	-	99	46.527	ENSOCUG00000000045	-	99	46.527	Oryctolagus_cuniculus
ENSCSAVG00000011751	-	99	55.077	ENSOCUG00000007093	-	99	54.885	Oryctolagus_cuniculus
ENSCSAVG00000011751	-	99	54.485	ENSORLG00000007093	ipo7	99	54.294	Oryzias_latipes
ENSCSAVG00000011751	-	99	54.580	ENSORLG00020011226	ipo7	99	54.389	Oryzias_latipes_hni
ENSCSAVG00000011751	-	99	54.485	ENSORLG00015009331	ipo7	99	54.294	Oryzias_latipes_hsok
ENSCSAVG00000011751	-	97	54.760	ENSOMEG00000001444	ipo7	97	54.465	Oryzias_melastigma
ENSCSAVG00000011751	-	99	55.163	ENSOGAG00000011507	IPO7	99	54.971	Otolemur_garnettii
ENSCSAVG00000011751	-	99	55.172	ENSOARG00000012687	IPO7	99	54.885	Ovis_aries
ENSCSAVG00000011751	-	99	55.268	ENSPPAG00000039367	IPO7	99	55.077	Pan_paniscus
ENSCSAVG00000011751	-	99	55.268	ENSPPRG00000013728	IPO7	99	55.077	Panthera_pardus
ENSCSAVG00000011751	-	99	55.268	ENSPTIG00000011093	IPO7	99	55.077	Panthera_tigris_altaica
ENSCSAVG00000011751	-	99	55.364	ENSPTRG00000028713	IPO7	99	55.172	Pan_troglodytes
ENSCSAVG00000011751	-	99	55.268	ENSPANG00000017378	IPO7	99	55.077	Papio_anubis
ENSCSAVG00000011751	-	99	53.728	ENSPKIG00000022252	ipo7	99	53.633	Paramormyrops_kingsleyae
ENSCSAVG00000011751	-	97	55.479	ENSPSIG00000006313	IPO7	99	55.281	Pelodiscus_sinensis
ENSCSAVG00000011751	-	99	55.172	ENSPEMG00000005751	Ipo7	99	55.110	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011751	-	99	55.502	ENSPCIG00000005946	IPO7	99	55.439	Phascolarctos_cinereus
ENSCSAVG00000011751	-	99	54.928	ENSPFOG00000009302	ipo7	99	54.641	Poecilia_formosa
ENSCSAVG00000011751	-	99	54.737	ENSPLAG00000014371	ipo7	99	54.641	Poecilia_latipinna
ENSCSAVG00000011751	-	99	54.928	ENSPMEG00000002604	ipo7	99	54.641	Poecilia_mexicana
ENSCSAVG00000011751	-	99	54.823	ENSPREG00000023089	ipo7	99	54.641	Poecilia_reticulata
ENSCSAVG00000011751	-	81	53.403	ENSPCAG00000007493	IPO7	81	53.403	Procavia_capensis
ENSCSAVG00000011751	-	79	54.124	ENSPVAG00000013029	IPO7	79	54.404	Pteropus_vampyrus
ENSCSAVG00000011751	-	99	54.971	ENSPNYG00000008534	ipo7	99	54.685	Pundamilia_nyererei
ENSCSAVG00000011751	-	99	54.685	ENSPNAG00000028115	ipo7	99	54.398	Pygocentrus_nattereri
ENSCSAVG00000011751	-	99	55.545	ENSRNOG00000010427	Ipo7	99	55.354	Rattus_norvegicus
ENSCSAVG00000011751	-	99	55.268	ENSRBIG00000031871	IPO7	99	55.077	Rhinopithecus_bieti
ENSCSAVG00000011751	-	99	55.268	ENSRROG00000031816	IPO7	99	55.077	Rhinopithecus_roxellana
ENSCSAVG00000011751	-	98	53.085	ENSSBOG00000029640	IPO7	99	52.889	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011751	-	99	53.876	ENSSFOG00015013937	ipo7	99	53.780	Scleropages_formosus
ENSCSAVG00000011751	-	99	54.250	ENSSMAG00000021418	ipo7	99	54.103	Scophthalmus_maximus
ENSCSAVG00000011751	-	99	54.493	ENSSDUG00000000611	ipo7	99	54.493	Seriola_dumerili
ENSCSAVG00000011751	-	99	54.493	ENSSLDG00000021417	ipo7	99	54.493	Seriola_lalandi_dorsalis
ENSCSAVG00000011751	-	94	48.378	ENSSARG00000005190	IPO7	94	48.163	Sorex_araneus
ENSCSAVG00000011751	-	99	53.065	ENSSPUG00000014319	IPO7	99	52.627	Sphenodon_punctatus
ENSCSAVG00000011751	-	99	54.398	ENSSPAG00000020296	ipo7	99	54.398	Stegastes_partitus
ENSCSAVG00000011751	-	99	55.268	ENSSSCG00000028886	IPO7	99	55.077	Sus_scrofa
ENSCSAVG00000011751	-	97	55.162	ENSTGUG00000008189	IPO7	99	54.966	Taeniopygia_guttata
ENSCSAVG00000011751	-	99	53.442	ENSTRUG00000017414	ipo7	99	53.155	Takifugu_rubripes
ENSCSAVG00000011751	-	99	54.111	ENSTNIG00000009369	ipo7	99	54.111	Tetraodon_nigroviridis
ENSCSAVG00000011751	-	99	54.215	ENSTTRG00000015352	IPO7	99	54.023	Tursiops_truncatus
ENSCSAVG00000011751	-	99	55.385	ENSUAMG00000001673	IPO7	99	55.192	Ursus_americanus
ENSCSAVG00000011751	-	99	55.268	ENSUMAG00000012870	IPO7	99	55.077	Ursus_maritimus
ENSCSAVG00000011751	-	99	54.598	ENSVPAG00000003917	IPO7	99	54.406	Vicugna_pacos
ENSCSAVG00000011751	-	97	51.663	ENSVVUG00000013293	-	99	51.566	Vulpes_vulpes
ENSCSAVG00000011751	-	99	54.981	ENSVVUG00000025822	IPO7	99	54.789	Vulpes_vulpes
ENSCSAVG00000011751	-	99	53.876	ENSXETG00000024201	ipo7	99	53.589	Xenopus_tropicalis
ENSCSAVG00000011751	-	99	50.622	ENSXCOG00000011269	ipo7	99	50.526	Xiphophorus_couchianus
ENSCSAVG00000011751	-	99	54.641	ENSXMAG00000009410	ipo7	99	54.545	Xiphophorus_maculatus