EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011769 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2754 bases
Position: chrreftig_1:6173050-6175803
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000020049	KH_1	PF00013.29	4.6e-05	1	1
ENSCSAVP00000020049	AKAP7_NLS	PF10469.9	2.6e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000020263	-	1373	-	ENSCSAVP00000020049	356 (aa)	-	H2ZR33

Gene Model

Click here to download ENSCSAVG00000011769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011769's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011769	-	98	41.667	ENSG00000138303	ASCC1	100	41.964	Homo_sapiens
ENSCSAVG00000011769	-	98	42.330	ENSAPOG00000017956	ascc1	98	42.330	Acanthochromis_polyacanthus
ENSCSAVG00000011769	-	98	41.504	ENSAMEG00000017400	ASCC1	93	41.504	Ailuropoda_melanoleuca
ENSCSAVG00000011769	-	98	43.099	ENSACIG00000024515	ascc1	98	43.175	Amphilophus_citrinellus
ENSCSAVG00000011769	-	98	43.466	ENSAOCG00000009038	ascc1	98	43.466	Amphiprion_ocellaris
ENSCSAVG00000011769	-	98	43.182	ENSAPEG00000019742	ascc1	98	43.182	Amphiprion_percula
ENSCSAVG00000011769	-	98	43.909	ENSATEG00000023377	ascc1	98	43.909	Anabas_testudineus
ENSCSAVG00000011769	-	98	43.175	ENSAPLG00000007456	ASCC1	98	43.175	Anas_platyrhynchos
ENSCSAVG00000011769	-	98	43.978	ENSACAG00000001244	ASCC1	95	43.978	Anolis_carolinensis
ENSCSAVG00000011769	-	98	41.389	ENSANAG00000027828	ASCC1	99	41.595	Aotus_nancymaae
ENSCSAVG00000011769	-	99	42.737	ENSACLG00000004955	ascc1	99	42.737	Astatotilapia_calliptera
ENSCSAVG00000011769	-	98	42.090	ENSAMXG00000011705	ascc1	98	42.416	Astyanax_mexicanus
ENSCSAVG00000011769	-	98	42.179	ENSBTAG00000000392	ASCC1	98	42.179	Bos_taurus
ENSCSAVG00000011769	-	98	41.457	ENSCJAG00000007273	ASCC1	98	41.457	Callithrix_jacchus
ENSCSAVG00000011769	-	98	41.389	ENSCAFG00000014415	ASCC1	98	41.389	Canis_familiaris
ENSCSAVG00000011769	-	98	41.667	ENSCAFG00020025090	ASCC1	98	41.667	Canis_lupus_dingo
ENSCSAVG00000011769	-	98	42.737	ENSCHIG00000020844	ASCC1	98	42.737	Capra_hircus
ENSCSAVG00000011769	-	98	41.551	ENSTSYG00000012145	ASCC1	98	41.551	Carlito_syrichta
ENSCSAVG00000011769	-	89	41.304	ENSCAPG00000005505	ASCC1	95	41.304	Cavia_aperea
ENSCSAVG00000011769	-	89	41.231	ENSCPOG00000001670	ASCC1	95	41.231	Cavia_porcellus
ENSCSAVG00000011769	-	98	41.667	ENSCCAG00000029607	ASCC1	98	41.667	Cebus_capucinus
ENSCSAVG00000011769	-	98	36.490	ENSCATG00000013018	ASCC1	98	36.490	Cercocebus_atys
ENSCSAVG00000011769	-	98	41.457	ENSCLAG00000012962	ASCC1	98	41.457	Chinchilla_lanigera
ENSCSAVG00000011769	-	98	41.389	ENSCSAG00000008531	ASCC1	92	41.389	Chlorocebus_sabaeus
ENSCSAVG00000011769	-	98	44.101	ENSCPBG00000025878	ASCC1	98	44.101	Chrysemys_picta_bellii
ENSCSAVG00000011769	-	99	60.955	ENSCING00000000491	-	99	60.955	Ciona_intestinalis
ENSCSAVG00000011769	-	98	35.655	ENSCANG00000032893	ASCC1	98	35.655	Colobus_angolensis_palliatus
ENSCSAVG00000011769	-	98	42.179	ENSCGRG00001016548	Ascc1	98	42.179	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011769	-	98	42.179	ENSCGRG00000009484	Ascc1	98	42.179	Cricetulus_griseus_crigri
ENSCSAVG00000011769	-	98	43.454	ENSCSEG00000017011	ascc1	98	43.454	Cynoglossus_semilaevis
ENSCSAVG00000011769	-	89	43.925	ENSCVAG00000004935	ascc1	97	43.925	Cyprinodon_variegatus
ENSCSAVG00000011769	-	67	45.082	ENSDARG00000077760	ascc1	98	45.082	Danio_rerio
ENSCSAVG00000011769	-	84	41.776	ENSDNOG00000006561	ASCC1	94	41.776	Dasypus_novemcinctus
ENSCSAVG00000011769	-	98	41.667	ENSDORG00000007065	Ascc1	98	41.667	Dipodomys_ordii
ENSCSAVG00000011769	-	89	39.045	ENSETEG00000000692	ASCC1	99	39.045	Echinops_telfairi
ENSCSAVG00000011769	-	100	39.237	ENSEBUG00000012423	ASCC1	99	39.237	Eptatretus_burgeri
ENSCSAVG00000011769	-	98	41.457	ENSEASG00005016551	ASCC1	98	41.457	Equus_asinus_asinus
ENSCSAVG00000011769	-	98	41.457	ENSECAG00000017211	ASCC1	98	41.457	Equus_caballus
ENSCSAVG00000011769	-	99	42.577	ENSELUG00000013564	ascc1	99	42.577	Esox_lucius
ENSCSAVG00000011769	-	98	41.389	ENSFCAG00000026720	ASCC1	98	41.389	Felis_catus
ENSCSAVG00000011769	-	98	44.789	ENSFALG00000012676	ASCC1	98	44.789	Ficedula_albicollis
ENSCSAVG00000011769	-	98	42.857	ENSFDAG00000020297	ASCC1	98	42.857	Fukomys_damarensis
ENSCSAVG00000011769	-	98	43.380	ENSFHEG00000012251	ascc1	98	43.380	Fundulus_heteroclitus
ENSCSAVG00000011769	-	98	41.926	ENSGMOG00000000360	ascc1	98	43.626	Gadus_morhua
ENSCSAVG00000011769	-	99	41.713	ENSGALG00000026019	ASCC1	99	41.989	Gallus_gallus
ENSCSAVG00000011769	-	98	43.220	ENSGAFG00000004788	ascc1	98	43.099	Gambusia_affinis
ENSCSAVG00000011769	-	98	42.778	ENSGACG00000002371	ascc1	98	42.936	Gasterosteus_aculeatus
ENSCSAVG00000011769	-	91	43.505	ENSGAGG00000009896	ASCC1	100	43.505	Gopherus_agassizii
ENSCSAVG00000011769	-	98	41.389	ENSGGOG00000007559	ASCC1	98	41.389	Gorilla_gorilla
ENSCSAVG00000011769	-	99	42.737	ENSHBUG00000018521	ascc1	99	42.737	Haplochromis_burtoni
ENSCSAVG00000011769	-	98	41.274	ENSHGLG00000012359	ASCC1	98	41.274	Heterocephalus_glaber_female
ENSCSAVG00000011769	-	98	41.274	ENSHGLG00100012456	ASCC1	98	41.274	Heterocephalus_glaber_male
ENSCSAVG00000011769	-	98	40.113	ENSHCOG00000016151	ascc1	98	40.845	Hippocampus_comes
ENSCSAVG00000011769	-	98	43.503	ENSIPUG00000009943	ascc1	98	43.820	Ictalurus_punctatus
ENSCSAVG00000011769	-	98	41.828	ENSSTOG00000000689	ASCC1	98	41.828	Ictidomys_tridecemlineatus
ENSCSAVG00000011769	-	98	40.556	ENSJJAG00000009829	Ascc1	98	40.556	Jaculus_jaculus
ENSCSAVG00000011769	-	98	44.568	ENSKMAG00000014780	ascc1	98	44.568	Kryptolebias_marmoratus
ENSCSAVG00000011769	-	99	44.044	ENSLBEG00000016879	ascc1	99	44.353	Labrus_bergylta
ENSCSAVG00000011769	-	99	39.779	ENSLACG00000017431	ASCC1	99	39.779	Latimeria_chalumnae
ENSCSAVG00000011769	-	99	43.056	ENSLOCG00000005266	ascc1	99	43.056	Lepisosteus_oculatus
ENSCSAVG00000011769	-	98	40.896	ENSLAFG00000015184	ASCC1	98	40.896	Loxodonta_africana
ENSCSAVG00000011769	-	98	41.389	ENSMFAG00000042558	ASCC1	98	41.389	Macaca_fascicularis
ENSCSAVG00000011769	-	89	41.463	ENSMMUG00000009479	ASCC1	89	41.463	Macaca_mulatta
ENSCSAVG00000011769	-	98	41.667	ENSMNEG00000036564	ASCC1	98	41.667	Macaca_nemestrina
ENSCSAVG00000011769	-	98	41.389	ENSMLEG00000027895	ASCC1	98	41.389	Mandrillus_leucophaeus
ENSCSAVG00000011769	-	99	41.551	ENSMAMG00000019041	ascc1	99	41.598	Mastacembelus_armatus
ENSCSAVG00000011769	-	99	42.737	ENSMZEG00005001082	ascc1	99	42.737	Maylandia_zebra
ENSCSAVG00000011769	-	99	40.884	ENSMGAG00000005410	ASCC1	94	41.160	Meleagris_gallopavo
ENSCSAVG00000011769	-	98	41.111	ENSMICG00000004222	ASCC1	98	41.111	Microcebus_murinus
ENSCSAVG00000011769	-	98	42.577	ENSMOCG00000007733	Ascc1	98	42.577	Microtus_ochrogaster
ENSCSAVG00000011769	-	98	42.222	ENSMMOG00000013797	ascc1	98	42.222	Mola_mola
ENSCSAVG00000011769	-	98	41.061	ENSMALG00000001855	ascc1	98	41.737	Monopterus_albus
ENSCSAVG00000011769	-	98	40.669	MGP_CAROLIEiJ_G0015351	Ascc1	98	40.669	Mus_caroli
ENSCSAVG00000011769	-	98	40.669	ENSMUSG00000044475	Ascc1	98	40.669	Mus_musculus
ENSCSAVG00000011769	-	98	40.947	MGP_PahariEiJ_G0030767	Ascc1	98	40.947	Mus_pahari
ENSCSAVG00000011769	-	98	40.833	ENSMPUG00000004088	ASCC1	90	40.833	Mustela_putorius_furo
ENSCSAVG00000011769	-	98	40.720	ENSMLUG00000005491	ASCC1	98	40.720	Myotis_lucifugus
ENSCSAVG00000011769	-	98	41.111	ENSNGAG00000022999	Ascc1	98	41.111	Nannospalax_galili
ENSCSAVG00000011769	-	99	42.458	ENSNBRG00000013947	ascc1	99	42.458	Neolamprologus_brichardi
ENSCSAVG00000011769	-	98	41.111	ENSNLEG00000016392	ASCC1	98	41.111	Nomascus_leucogenys
ENSCSAVG00000011769	-	67	31.020	ENSMEUG00000003812	-	99	31.020	Notamacropus_eugenii
ENSCSAVG00000011769	-	89	30.812	ENSOPRG00000004965	ASCC1	99	30.812	Ochotona_princeps
ENSCSAVG00000011769	-	97	35.674	ENSODEG00000013709	ASCC1	98	35.674	Octodon_degus
ENSCSAVG00000011769	-	98	43.750	ENSONIG00000016090	ascc1	98	43.750	Oreochromis_niloticus
ENSCSAVG00000011769	-	98	43.539	ENSOANG00000011748	ASCC1	98	43.539	Ornithorhynchus_anatinus
ENSCSAVG00000011769	-	98	39.496	ENSOCUG00000016753	ASCC1	98	39.496	Oryctolagus_cuniculus
ENSCSAVG00000011769	-	98	44.193	ENSORLG00000009163	ascc1	97	44.225	Oryzias_latipes
ENSCSAVG00000011769	-	98	43.909	ENSORLG00020006942	ascc1	97	43.944	Oryzias_latipes_hni
ENSCSAVG00000011769	-	98	44.476	ENSORLG00015006164	ascc1	97	44.507	Oryzias_latipes_hsok
ENSCSAVG00000011769	-	98	44.633	ENSOMEG00000011960	ascc1	97	44.693	Oryzias_melastigma
ENSCSAVG00000011769	-	98	40.997	ENSOGAG00000008212	ASCC1	92	40.997	Otolemur_garnettii
ENSCSAVG00000011769	-	98	42.737	ENSOARG00000007094	ASCC1	98	42.737	Ovis_aries
ENSCSAVG00000011769	-	98	41.667	ENSPPAG00000039805	ASCC1	98	41.667	Pan_paniscus
ENSCSAVG00000011769	-	98	41.389	ENSPPRG00000010572	ASCC1	98	41.389	Panthera_pardus
ENSCSAVG00000011769	-	98	41.389	ENSPTIG00000015725	ASCC1	98	41.389	Panthera_tigris_altaica
ENSCSAVG00000011769	-	98	41.667	ENSPTRG00000002609	ASCC1	98	41.667	Pan_troglodytes
ENSCSAVG00000011769	-	98	41.389	ENSPANG00000022316	ASCC1	98	41.389	Papio_anubis
ENSCSAVG00000011769	-	97	42.735	ENSPKIG00000007571	ascc1	97	42.735	Paramormyrops_kingsleyae
ENSCSAVG00000011769	-	71	43.922	ENSPSIG00000017791	ASCC1	97	43.922	Pelodiscus_sinensis
ENSCSAVG00000011769	-	59	40.758	ENSPMGG00000003988	ascc1	93	40.758	Periophthalmus_magnuspinnatus
ENSCSAVG00000011769	-	98	39.560	ENSPEMG00000002244	Ascc1	98	39.560	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011769	-	98	43.343	ENSPFOG00000023421	ascc1	98	43.343	Poecilia_formosa
ENSCSAVG00000011769	-	98	43.626	ENSPLAG00000001021	ascc1	98	43.626	Poecilia_latipinna
ENSCSAVG00000011769	-	98	43.343	ENSPMEG00000001736	ascc1	98	43.343	Poecilia_mexicana
ENSCSAVG00000011769	-	98	42.776	ENSPREG00000001944	ascc1	98	42.776	Poecilia_reticulata
ENSCSAVG00000011769	-	98	41.667	ENSPPYG00000002356	-	98	41.667	Pongo_abelii
ENSCSAVG00000011769	-	67	44.534	ENSPCAG00000012317	ASCC1	71	44.534	Procavia_capensis
ENSCSAVG00000011769	-	98	41.111	ENSPCOG00000017110	ASCC1	98	41.111	Propithecus_coquereli
ENSCSAVG00000011769	-	91	38.889	ENSPVAG00000001554	ASCC1	98	38.889	Pteropus_vampyrus
ENSCSAVG00000011769	-	99	42.737	ENSPNYG00000021413	ascc1	99	42.737	Pundamilia_nyererei
ENSCSAVG00000011769	-	82	44.218	ENSPNAG00000008666	ascc1	89	44.595	Pygocentrus_nattereri
ENSCSAVG00000011769	-	98	40.833	ENSRNOG00000056647	Ascc1	98	40.833	Rattus_norvegicus
ENSCSAVG00000011769	-	98	41.389	ENSRBIG00000033507	ASCC1	98	41.389	Rhinopithecus_bieti
ENSCSAVG00000011769	-	98	41.389	ENSRROG00000005189	ASCC1	98	41.389	Rhinopithecus_roxellana
ENSCSAVG00000011769	-	98	38.056	ENSSBOG00000022342	ASCC1	98	38.056	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011769	-	98	45.787	ENSSHAG00000006413	ASCC1	98	45.787	Sarcophilus_harrisii
ENSCSAVG00000011769	-	98	41.573	ENSSFOG00015013939	ascc1	98	41.573	Scleropages_formosus
ENSCSAVG00000011769	-	98	41.972	ENSSMAG00000002213	ascc1	98	41.972	Scophthalmus_maximus
ENSCSAVG00000011769	-	98	43.059	ENSSDUG00000019444	ascc1	98	43.220	Seriola_dumerili
ENSCSAVG00000011769	-	98	43.626	ENSSLDG00000024224	ascc1	98	43.785	Seriola_lalandi_dorsalis
ENSCSAVG00000011769	-	67	43.725	ENSSARG00000001560	ASCC1	71	43.725	Sorex_araneus
ENSCSAVG00000011769	-	98	43.855	ENSSPUG00000010417	ASCC1	98	43.855	Sphenodon_punctatus
ENSCSAVG00000011769	-	98	43.059	ENSSPAG00000015588	ascc1	98	43.380	Stegastes_partitus
ENSCSAVG00000011769	-	98	41.274	ENSSSCG00000023130	ASCC1	98	41.274	Sus_scrofa
ENSCSAVG00000011769	-	98	42.938	ENSTRUG00000012576	ascc1	98	43.503	Takifugu_rubripes
ENSCSAVG00000011769	-	98	41.417	ENSTNIG00000019392	ascc1	98	41.962	Tetraodon_nigroviridis
ENSCSAVG00000011769	-	67	43.496	ENSTBEG00000005601	ASCC1	79	43.496	Tupaia_belangeri
ENSCSAVG00000011769	-	91	36.885	ENSTTRG00000009744	ASCC1	98	36.885	Tursiops_truncatus
ENSCSAVG00000011769	-	98	41.389	ENSUAMG00000009172	ASCC1	98	41.389	Ursus_americanus
ENSCSAVG00000011769	-	89	41.463	ENSUMAG00000008959	ASCC1	89	41.463	Ursus_maritimus
ENSCSAVG00000011769	-	76	36.991	ENSVPAG00000002811	ASCC1	99	36.991	Vicugna_pacos
ENSCSAVG00000011769	-	98	41.457	ENSVVUG00000022616	ASCC1	98	41.457	Vulpes_vulpes
ENSCSAVG00000011769	-	99	43.360	ENSXETG00000006149	ascc1	99	43.360	Xenopus_tropicalis
ENSCSAVG00000011769	-	98	42.776	ENSXCOG00000006169	ascc1	98	42.776	Xiphophorus_couchianus
ENSCSAVG00000011769	-	98	42.776	ENSXMAG00000014996	ascc1	98	42.776	Xiphophorus_maculatus