EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011770 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4206 bases
Position: chrreftig_1:6175695-6179900
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000020050	Ribosomal_L10	PF00466.20	9.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000020264	-	921	-	ENSCSAVP00000020050	280 (aa)	-	H2ZR34

Gene Model

Click here to download ENSCSAVG00000011770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011770	-	78	61.644	ENSG00000053372	MRTO4	92	61.644	Homo_sapiens
ENSCSAVG00000011770	-	57	56.250	ENSAPOG00000013189	-	89	53.757	Acanthochromis_polyacanthus
ENSCSAVG00000011770	-	79	59.009	ENSAPOG00000011387	mrto4	99	56.780	Acanthochromis_polyacanthus
ENSCSAVG00000011770	-	57	56.250	ENSAPOG00000013290	-	89	53.757	Acanthochromis_polyacanthus
ENSCSAVG00000011770	-	78	61.644	ENSAMEG00000003014	MRTO4	92	61.644	Ailuropoda_melanoleuca
ENSCSAVG00000011770	-	76	40.826	ENSAMEG00000014981	-	97	40.826	Ailuropoda_melanoleuca
ENSCSAVG00000011770	-	80	59.111	ENSACIG00000008213	mrto4	94	59.111	Amphilophus_citrinellus
ENSCSAVG00000011770	-	74	59.903	ENSAOCG00000006483	mrto4	82	59.903	Amphiprion_ocellaris
ENSCSAVG00000011770	-	77	60.185	ENSAPEG00000004866	mrto4	92	60.185	Amphiprion_percula
ENSCSAVG00000011770	-	80	59.556	ENSATEG00000024976	mrto4	94	59.556	Anabas_testudineus
ENSCSAVG00000011770	-	55	56.774	ENSAPLG00000013861	MRTO4	88	56.774	Anas_platyrhynchos
ENSCSAVG00000011770	-	78	62.100	ENSANAG00000029674	MRTO4	92	62.100	Aotus_nancymaae
ENSCSAVG00000011770	-	80	58.667	ENSACLG00000016523	mrto4	94	58.667	Astatotilapia_calliptera
ENSCSAVG00000011770	-	79	61.261	ENSAMXG00000003899	mrto4	93	61.261	Astyanax_mexicanus
ENSCSAVG00000011770	-	78	63.014	ENSBTAG00000011951	MRTO4	92	63.014	Bos_taurus
ENSCSAVG00000011770	-	78	62.100	ENSCJAG00000006812	MRTO4	92	62.100	Callithrix_jacchus
ENSCSAVG00000011770	-	76	43.868	ENSCAFG00000009080	-	96	43.868	Canis_familiaris
ENSCSAVG00000011770	-	78	61.187	ENSCAFG00000015189	-	91	61.187	Canis_familiaris
ENSCSAVG00000011770	-	78	55.708	ENSCAFG00000000532	-	91	55.708	Canis_familiaris
ENSCSAVG00000011770	-	78	61.187	ENSCAFG00020008173	MRTO4	91	61.187	Canis_lupus_dingo
ENSCSAVG00000011770	-	78	63.014	ENSCHIG00000014751	MRTO4	92	63.014	Capra_hircus
ENSCSAVG00000011770	-	76	45.755	ENSCHIG00000010639	-	91	45.755	Capra_hircus
ENSCSAVG00000011770	-	78	63.014	ENSTSYG00000013413	MRTO4	92	63.014	Carlito_syrichta
ENSCSAVG00000011770	-	70	59.487	ENSCAPG00000012648	MRTO4	86	59.487	Cavia_aperea
ENSCSAVG00000011770	-	78	62.100	ENSCPOG00000033237	MRTO4	91	62.100	Cavia_porcellus
ENSCSAVG00000011770	-	78	62.100	ENSCCAG00000036206	MRTO4	92	62.100	Cebus_capucinus
ENSCSAVG00000011770	-	78	51.613	ENSCATG00000030492	-	93	51.613	Cercocebus_atys
ENSCSAVG00000011770	-	78	61.644	ENSCLAG00000001997	MRTO4	91	61.644	Chinchilla_lanigera
ENSCSAVG00000011770	-	78	60.274	ENSCSAG00000018596	-	92	60.274	Chlorocebus_sabaeus
ENSCSAVG00000011770	-	78	60.550	ENSCSAG00000000876	-	91	60.550	Chlorocebus_sabaeus
ENSCSAVG00000011770	-	78	59.633	ENSCPBG00000023562	MRTO4	90	59.633	Chrysemys_picta_bellii
ENSCSAVG00000011770	-	78	61.187	ENSCANG00000002395	-	92	61.187	Colobus_angolensis_palliatus
ENSCSAVG00000011770	-	78	54.338	ENSCANG00000005353	-	91	54.338	Colobus_angolensis_palliatus
ENSCSAVG00000011770	-	79	57.589	ENSCGRG00001001286	-	95	57.589	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011770	-	78	62.557	ENSCGRG00001005758	-	92	62.557	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011770	-	79	57.589	ENSCGRG00000001527	-	95	57.589	Cricetulus_griseus_crigri
ENSCSAVG00000011770	-	78	61.644	ENSCGRG00000010649	-	92	61.644	Cricetulus_griseus_crigri
ENSCSAVG00000011770	-	78	58.447	ENSCSEG00000021629	mrto4	93	58.108	Cynoglossus_semilaevis
ENSCSAVG00000011770	-	79	60.000	ENSCVAG00000012249	mrto4	94	59.910	Cyprinodon_variegatus
ENSCSAVG00000011770	-	78	60.550	ENSDARG00000007130	mrto4	90	60.550	Danio_rerio
ENSCSAVG00000011770	-	78	62.100	ENSDNOG00000010119	-	92	62.100	Dasypus_novemcinctus
ENSCSAVG00000011770	-	76	48.372	ENSDNOG00000045395	-	89	48.372	Dasypus_novemcinctus
ENSCSAVG00000011770	-	75	59.809	ENSDNOG00000030871	-	88	59.809	Dasypus_novemcinctus
ENSCSAVG00000011770	-	76	62.911	ENSDORG00000025382	Mrto4	89	62.911	Dipodomys_ordii
ENSCSAVG00000011770	-	76	62.441	ENSETEG00000001675	MRTO4	88	62.441	Echinops_telfairi
ENSCSAVG00000011770	-	78	62.100	ENSEASG00005014967	MRTO4	92	62.100	Equus_asinus_asinus
ENSCSAVG00000011770	-	78	61.187	ENSECAG00000012598	MRTO4	92	61.187	Equus_caballus
ENSCSAVG00000011770	-	75	47.619	ENSEEUG00000013520	MRTO4	92	47.619	Erinaceus_europaeus
ENSCSAVG00000011770	-	78	60.550	ENSELUG00000011152	mrto4	93	59.910	Esox_lucius
ENSCSAVG00000011770	-	78	62.100	ENSFCAG00000008771	MRTO4	92	62.100	Felis_catus
ENSCSAVG00000011770	-	78	58.716	ENSFALG00000010619	MRTO4	91	58.716	Ficedula_albicollis
ENSCSAVG00000011770	-	78	63.014	ENSFDAG00000013300	MRTO4	91	63.014	Fukomys_damarensis
ENSCSAVG00000011770	-	78	60.550	ENSFHEG00000022920	mrto4	94	59.910	Fundulus_heteroclitus
ENSCSAVG00000011770	-	76	61.033	ENSGMOG00000001422	mrto4	94	60.648	Gadus_morhua
ENSCSAVG00000011770	-	78	60.092	ENSGALG00000003991	MRTO4	92	60.092	Gallus_gallus
ENSCSAVG00000011770	-	78	60.550	ENSGAFG00000012570	mrto4	95	59.556	Gambusia_affinis
ENSCSAVG00000011770	-	79	59.009	ENSGACG00000001672	mrto4	94	59.009	Gasterosteus_aculeatus
ENSCSAVG00000011770	-	75	58.852	ENSGAGG00000012997	MRTO4	88	58.852	Gopherus_agassizii
ENSCSAVG00000011770	-	75	43.062	ENSGGOG00000036991	-	83	43.062	Gorilla_gorilla
ENSCSAVG00000011770	-	78	61.644	ENSGGOG00000000533	MRTO4	99	58.824	Gorilla_gorilla
ENSCSAVG00000011770	-	78	50.230	ENSGGOG00000042625	-	93	50.230	Gorilla_gorilla
ENSCSAVG00000011770	-	80	58.667	ENSHBUG00000009670	mrto4	94	58.667	Haplochromis_burtoni
ENSCSAVG00000011770	-	78	61.644	ENSHGLG00000012157	MRTO4	92	61.644	Heterocephalus_glaber_female
ENSCSAVG00000011770	-	78	61.644	ENSHGLG00100014484	MRTO4	92	61.644	Heterocephalus_glaber_male
ENSCSAVG00000011770	-	82	59.389	ENSHCOG00000019894	mrto4	97	59.389	Hippocampus_comes
ENSCSAVG00000011770	-	78	63.761	ENSIPUG00000002957	mrto4	90	63.761	Ictalurus_punctatus
ENSCSAVG00000011770	-	78	62.100	ENSSTOG00000028112	MRTO4	92	62.100	Ictidomys_tridecemlineatus
ENSCSAVG00000011770	-	78	59.545	ENSJJAG00000017998	Mrto4	92	59.545	Jaculus_jaculus
ENSCSAVG00000011770	-	78	60.550	ENSKMAG00000010148	mrto4	92	60.550	Kryptolebias_marmoratus
ENSCSAVG00000011770	-	76	61.215	ENSLBEG00000025010	mrto4	91	61.215	Labrus_bergylta
ENSCSAVG00000011770	-	78	61.468	ENSLACG00000019155	MRTO4	92	61.468	Latimeria_chalumnae
ENSCSAVG00000011770	-	77	62.037	ENSLOCG00000004468	mrto4	88	62.037	Lepisosteus_oculatus
ENSCSAVG00000011770	-	78	63.014	ENSLAFG00000010416	MRTO4	92	63.014	Loxodonta_africana
ENSCSAVG00000011770	-	78	60.731	ENSMFAG00000033225	-	92	60.731	Macaca_fascicularis
ENSCSAVG00000011770	-	79	46.429	ENSMMUG00000044851	-	93	46.429	Macaca_mulatta
ENSCSAVG00000011770	-	78	60.731	ENSMMUG00000038335	MRTO4	92	60.731	Macaca_mulatta
ENSCSAVG00000011770	-	78	60.731	ENSMNEG00000032783	-	92	60.731	Macaca_nemestrina
ENSCSAVG00000011770	-	78	60.731	ENSMLEG00000023273	-	92	60.731	Mandrillus_leucophaeus
ENSCSAVG00000011770	-	80	57.778	ENSMAMG00000014839	mrto4	94	57.778	Mastacembelus_armatus
ENSCSAVG00000011770	-	80	58.667	ENSMZEG00005013929	mrto4	94	58.667	Maylandia_zebra
ENSCSAVG00000011770	-	78	60.550	ENSMGAG00000005361	MRTO4	93	59.910	Meleagris_gallopavo
ENSCSAVG00000011770	-	78	62.557	ENSMAUG00000019627	-	92	62.557	Mesocricetus_auratus
ENSCSAVG00000011770	-	78	61.187	ENSMICG00000004019	MRTO4	91	61.187	Microcebus_murinus
ENSCSAVG00000011770	-	73	55.122	ENSMICG00000033640	-	100	55.122	Microcebus_murinus
ENSCSAVG00000011770	-	62	60.116	ENSMOCG00000018413	Mrto4	90	60.116	Microtus_ochrogaster
ENSCSAVG00000011770	-	77	58.796	ENSMMOG00000010735	mrto4	92	58.796	Mola_mola
ENSCSAVG00000011770	-	78	61.644	ENSMODG00000015874	MRTO4	90	61.644	Monodelphis_domestica
ENSCSAVG00000011770	-	78	59.633	ENSMALG00000007769	mrto4	98	59.633	Monopterus_albus
ENSCSAVG00000011770	-	78	63.014	MGP_CAROLIEiJ_G0026711	Mrto4	92	63.014	Mus_caroli
ENSCSAVG00000011770	-	78	63.014	ENSMUSG00000028741	Mrto4	100	67.213	Mus_musculus
ENSCSAVG00000011770	-	78	61.644	MGP_PahariEiJ_G0029042	Mrto4	91	61.644	Mus_pahari
ENSCSAVG00000011770	-	78	63.014	MGP_SPRETEiJ_G0027691	Mrto4	92	63.014	Mus_spretus
ENSCSAVG00000011770	-	78	61.644	ENSMPUG00000016181	MRTO4	92	61.644	Mustela_putorius_furo
ENSCSAVG00000011770	-	78	60.731	ENSMLUG00000025001	-	92	60.731	Myotis_lucifugus
ENSCSAVG00000011770	-	78	62.557	ENSMLUG00000001566	-	92	62.557	Myotis_lucifugus
ENSCSAVG00000011770	-	79	60.526	ENSNGAG00000011660	Mrto4	95	60.526	Nannospalax_galili
ENSCSAVG00000011770	-	77	60.648	ENSNBRG00000021435	mrto4	90	60.648	Neolamprologus_brichardi
ENSCSAVG00000011770	-	56	56.688	ENSNLEG00000034965	-	85	56.688	Nomascus_leucogenys
ENSCSAVG00000011770	-	78	54.338	ENSNLEG00000018006	-	92	54.338	Nomascus_leucogenys
ENSCSAVG00000011770	-	78	55.708	ENSNLEG00000027896	-	91	55.708	Nomascus_leucogenys
ENSCSAVG00000011770	-	59	67.073	ENSMEUG00000000027	MRTO4	100	67.073	Notamacropus_eugenii
ENSCSAVG00000011770	-	78	62.100	ENSOPRG00000012746	MRTO4	92	62.100	Ochotona_princeps
ENSCSAVG00000011770	-	78	61.644	ENSODEG00000015379	-	91	61.644	Octodon_degus
ENSCSAVG00000011770	-	78	61.187	ENSODEG00000019157	-	91	61.187	Octodon_degus
ENSCSAVG00000011770	-	78	57.078	ENSODEG00000011537	-	91	57.078	Octodon_degus
ENSCSAVG00000011770	-	78	56.621	ENSODEG00000014387	-	91	56.621	Octodon_degus
ENSCSAVG00000011770	-	78	52.055	ENSODEG00000014016	-	80	52.055	Octodon_degus
ENSCSAVG00000011770	-	80	58.667	ENSONIG00000014318	mrto4	94	58.667	Oreochromis_niloticus
ENSCSAVG00000011770	-	77	58.605	ENSOANG00000015345	MRTO4	90	58.605	Ornithorhynchus_anatinus
ENSCSAVG00000011770	-	78	61.644	ENSOCUG00000000274	MRTO4	92	61.644	Oryctolagus_cuniculus
ENSCSAVG00000011770	-	78	59.633	ENSORLG00000027922	mrto4	100	52.896	Oryzias_latipes
ENSCSAVG00000011770	-	78	59.633	ENSORLG00020019412	mrto4	93	58.744	Oryzias_latipes_hni
ENSCSAVG00000011770	-	78	59.633	ENSORLG00015015309	mrto4	100	52.896	Oryzias_latipes_hsok
ENSCSAVG00000011770	-	78	59.633	ENSOMEG00000021110	mrto4	95	58.667	Oryzias_melastigma
ENSCSAVG00000011770	-	78	62.100	ENSOGAG00000010713	-	92	62.100	Otolemur_garnettii
ENSCSAVG00000011770	-	76	44.811	ENSOGAG00000027996	-	87	44.811	Otolemur_garnettii
ENSCSAVG00000011770	-	78	61.644	ENSPPAG00000043731	MRTO4	92	61.644	Pan_paniscus
ENSCSAVG00000011770	-	78	42.922	ENSPPAG00000039572	-	90	42.922	Pan_paniscus
ENSCSAVG00000011770	-	76	62.441	ENSPPRG00000024765	MRTO4	89	62.441	Panthera_pardus
ENSCSAVG00000011770	-	76	63.850	ENSPTIG00000016208	MRTO4	89	63.850	Panthera_tigris_altaica
ENSCSAVG00000011770	-	78	61.644	ENSPTRG00000000262	MRTO4	92	61.644	Pan_troglodytes
ENSCSAVG00000011770	-	78	43.379	ENSPTRG00000046027	-	90	43.379	Pan_troglodytes
ENSCSAVG00000011770	-	78	55.708	ENSPANG00000011596	-	96	55.708	Papio_anubis
ENSCSAVG00000011770	-	78	55.251	ENSPANG00000017838	-	91	55.251	Papio_anubis
ENSCSAVG00000011770	-	76	60.094	ENSPKIG00000017917	mrto4	90	59.447	Paramormyrops_kingsleyae
ENSCSAVG00000011770	-	63	56.818	ENSPSIG00000015125	MRTO4	91	56.818	Pelodiscus_sinensis
ENSCSAVG00000011770	-	79	53.636	ENSPMGG00000013461	mrto4	95	52.838	Periophthalmus_magnuspinnatus
ENSCSAVG00000011770	-	78	62.557	ENSPEMG00000010459	-	92	62.557	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011770	-	78	58.108	ENSPEMG00000023720	-	92	58.108	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011770	-	78	61.187	ENSPCIG00000003652	MRTO4	90	61.187	Phascolarctos_cinereus
ENSCSAVG00000011770	-	78	61.009	ENSPFOG00000013266	mrto4	95	60.000	Poecilia_formosa
ENSCSAVG00000011770	-	78	61.009	ENSPLAG00000016285	mrto4	95	60.000	Poecilia_latipinna
ENSCSAVG00000011770	-	78	61.009	ENSPMEG00000003539	mrto4	95	60.000	Poecilia_mexicana
ENSCSAVG00000011770	-	78	60.092	ENSPREG00000006249	mrto4	95	59.111	Poecilia_reticulata
ENSCSAVG00000011770	-	78	61.644	ENSPPYG00000001795	MRTO4	92	61.644	Pongo_abelii
ENSCSAVG00000011770	-	78	55.251	ENSPCAG00000001458	MRTO4	94	55.357	Procavia_capensis
ENSCSAVG00000011770	-	84	57.983	ENSPCOG00000014182	MRTO4	99	57.983	Propithecus_coquereli
ENSCSAVG00000011770	-	78	62.557	ENSPVAG00000005775	MRTO4	95	62.281	Pteropus_vampyrus
ENSCSAVG00000011770	-	80	58.222	ENSPNYG00000018672	mrto4	94	58.222	Pundamilia_nyererei
ENSCSAVG00000011770	-	76	63.551	ENSPNAG00000027733	mrto4	90	63.551	Pygocentrus_nattereri
ENSCSAVG00000011770	-	61	61.047	ENSRNOG00000017979	Mrto4	89	61.047	Rattus_norvegicus
ENSCSAVG00000011770	-	68	52.880	ENSRBIG00000036159	-	90	52.880	Rhinopithecus_bieti
ENSCSAVG00000011770	-	78	60.274	ENSRBIG00000036806	-	92	60.274	Rhinopithecus_bieti
ENSCSAVG00000011770	-	79	49.107	ENSRBIG00000013434	-	93	49.107	Rhinopithecus_bieti
ENSCSAVG00000011770	-	78	59.817	ENSRROG00000011593	-	88	59.817	Rhinopithecus_roxellana
ENSCSAVG00000011770	-	78	60.274	ENSRROG00000042838	-	92	60.274	Rhinopithecus_roxellana
ENSCSAVG00000011770	-	78	55.708	ENSRROG00000037374	-	91	55.708	Rhinopithecus_roxellana
ENSCSAVG00000011770	-	78	62.100	ENSSBOG00000022924	MRTO4	92	62.100	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011770	-	75	60.952	ENSSHAG00000008423	MRTO4	90	60.952	Sarcophilus_harrisii
ENSCSAVG00000011770	-	79	60.811	ENSSFOG00015006887	mrto4	93	60.811	Scleropages_formosus
ENSCSAVG00000011770	-	79	58.559	ENSSMAG00000014393	mrto4	93	58.296	Scophthalmus_maximus
ENSCSAVG00000011770	-	80	57.333	ENSSDUG00000015362	mrto4	99	55.932	Seriola_dumerili
ENSCSAVG00000011770	-	80	57.333	ENSSLDG00000015813	mrto4	99	55.932	Seriola_lalandi_dorsalis
ENSCSAVG00000011770	-	78	61.644	ENSSARG00000012700	MRTO4	91	61.644	Sorex_araneus
ENSCSAVG00000011770	-	78	61.009	ENSSPUG00000001110	MRTO4	92	61.009	Sphenodon_punctatus
ENSCSAVG00000011770	-	80	58.222	ENSSPAG00000007811	mrto4	99	56.303	Stegastes_partitus
ENSCSAVG00000011770	-	78	63.014	ENSSSCG00000034814	MRTO4	91	63.014	Sus_scrofa
ENSCSAVG00000011770	-	64	59.218	ENSTGUG00000016935	MRTO4	97	59.218	Taeniopygia_guttata
ENSCSAVG00000011770	-	80	57.333	ENSTRUG00000019838	mrto4	95	57.333	Takifugu_rubripes
ENSCSAVG00000011770	-	79	57.207	ENSTNIG00000014802	mrto4	94	56.951	Tetraodon_nigroviridis
ENSCSAVG00000011770	-	78	63.470	ENSTTRG00000014203	MRTO4	92	63.470	Tursiops_truncatus
ENSCSAVG00000011770	-	75	60.476	ENSUAMG00000026191	MRTO4	84	60.476	Ursus_americanus
ENSCSAVG00000011770	-	78	61.644	ENSUMAG00000018964	MRTO4	92	61.644	Ursus_maritimus
ENSCSAVG00000011770	-	78	61.187	ENSVVUG00000029432	MRTO4	91	61.187	Vulpes_vulpes
ENSCSAVG00000011770	-	78	58.447	ENSXETG00000020828	mrto4	91	58.447	Xenopus_tropicalis
ENSCSAVG00000011770	-	79	60.360	ENSXCOG00000013521	mrto4	95	60.360	Xiphophorus_couchianus