EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011797 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 14877 bases
Position: chrreftig_1:6266221-6281097
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000020092	Ribosomal_L1	PF00687.21	8.9e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000020307	-	1378	-	ENSCSAVP00000020092	337 (aa)	-	H2ZR76

Gene Model

Click here to download ENSCSAVG00000011797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011797	-	72	33.735	ENSG00000171490	RSL1D1	97	37.821	Homo_sapiens
ENSCSAVG00000011797	-	72	30.081	ENSAPOG00000004544	rsl1d1	75	30.479	Acanthochromis_polyacanthus
ENSCSAVG00000011797	-	69	34.188	ENSAMEG00000009570	RSL1D1	55	32.847	Ailuropoda_melanoleuca
ENSCSAVG00000011797	-	79	30.337	ENSACIG00000006608	rsl1d1	83	30.435	Amphilophus_citrinellus
ENSCSAVG00000011797	-	76	30.233	ENSAOCG00000001548	rsl1d1	76	30.822	Amphiprion_ocellaris
ENSCSAVG00000011797	-	76	30.233	ENSAPEG00000003334	rsl1d1	76	30.822	Amphiprion_percula
ENSCSAVG00000011797	-	72	31.557	ENSATEG00000009247	rsl1d1	63	32.911	Anabas_testudineus
ENSCSAVG00000011797	-	68	36.364	ENSAPLG00000004451	RSL1D1	51	36.364	Anas_platyrhynchos
ENSCSAVG00000011797	-	71	33.061	ENSANAG00000034590	-	53	31.818	Aotus_nancymaae
ENSCSAVG00000011797	-	80	31.408	ENSANAG00000028185	-	63	30.909	Aotus_nancymaae
ENSCSAVG00000011797	-	69	31.646	ENSACLG00000017535	rsl1d1	66	31.646	Astatotilapia_calliptera
ENSCSAVG00000011797	-	72	30.769	ENSBTAG00000014588	RSL1D1	51	30.769	Bos_taurus
ENSCSAVG00000011797	-	71	33.061	ENSCJAG00000008375	-	54	31.818	Callithrix_jacchus
ENSCSAVG00000011797	-	71	33.061	ENSCJAG00000042606	-	54	31.818	Callithrix_jacchus
ENSCSAVG00000011797	-	77	32.830	ENSCAFG00020024488	-	55	32.830	Canis_lupus_dingo
ENSCSAVG00000011797	-	68	30.472	ENSCHIG00000009867	-	62	30.545	Capra_hircus
ENSCSAVG00000011797	-	86	34.899	ENSTSYG00000009276	RSL1D1	59	34.899	Carlito_syrichta
ENSCSAVG00000011797	-	69	33.047	ENSCPOG00000010630	RSL1D1	59	31.560	Cavia_porcellus
ENSCSAVG00000011797	-	71	30.612	ENSCCAG00000025197	-	53	30.612	Cebus_capucinus
ENSCSAVG00000011797	-	71	32.653	ENSCCAG00000017391	-	50	32.653	Cebus_capucinus
ENSCSAVG00000011797	-	71	33.878	ENSCATG00000031153	RSL1D1	61	32.331	Cercocebus_atys
ENSCSAVG00000011797	-	69	32.479	ENSCLAG00000010975	RSL1D1	61	31.544	Chinchilla_lanigera
ENSCSAVG00000011797	-	71	34.694	ENSCSAG00000008255	RSL1D1	54	33.333	Chlorocebus_sabaeus
ENSCSAVG00000011797	-	73	32.932	ENSCHOG00000010827	RSL1D1	51	32.932	Choloepus_hoffmanni
ENSCSAVG00000011797	-	72	32.520	ENSCPBG00000004564	RSL1D1	88	33.000	Chrysemys_picta_bellii
ENSCSAVG00000011797	-	67	54.222	ENSCING00000011810	-	99	54.222	Ciona_intestinalis
ENSCSAVG00000011797	-	71	33.878	ENSCANG00000029202	RSL1D1	56	32.576	Colobus_angolensis_palliatus
ENSCSAVG00000011797	-	69	31.897	ENSCGRG00001014989	Rsl1d1	52	31.897	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011797	-	69	31.897	ENSCGRG00000001905	Rsl1d1	52	31.897	Cricetulus_griseus_crigri
ENSCSAVG00000011797	-	70	32.353	ENSCSEG00000019693	rsl1d1	64	32.353	Cynoglossus_semilaevis
ENSCSAVG00000011797	-	69	30.213	ENSCVAG00000000672	rsl1d1	66	30.213	Cyprinodon_variegatus
ENSCSAVG00000011797	-	82	32.616	ENSDARG00000055868	rsl1d1	72	32.616	Danio_rerio
ENSCSAVG00000011797	-	73	32.400	ENSDNOG00000040779	-	63	31.132	Dasypus_novemcinctus
ENSCSAVG00000011797	-	73	32.400	ENSDNOG00000004601	-	63	31.132	Dasypus_novemcinctus
ENSCSAVG00000011797	-	65	33.028	ENSEBUG00000005400	-	52	33.028	Eptatretus_burgeri
ENSCSAVG00000011797	-	68	34.335	ENSEASG00005011499	RSL1D1	53	33.080	Equus_asinus_asinus
ENSCSAVG00000011797	-	68	33.906	ENSECAG00000025036	RSL1D1	53	32.700	Equus_caballus
ENSCSAVG00000011797	-	70	34.583	ENSELUG00000019243	rsl1d1	71	34.583	Esox_lucius
ENSCSAVG00000011797	-	69	34.188	ENSFCAG00000010114	RSL1D1	56	33.212	Felis_catus
ENSCSAVG00000011797	-	77	32.061	ENSFDAG00000011414	RSL1D1	69	31.190	Fukomys_damarensis
ENSCSAVG00000011797	-	70	32.636	ENSGMOG00000013048	rsl1d1	84	32.636	Gadus_morhua
ENSCSAVG00000011797	-	69	34.764	ENSGALG00000033690	RSL1D1	52	34.764	Gallus_gallus
ENSCSAVG00000011797	-	79	31.227	ENSGAFG00000020794	rsl1d1	77	31.741	Gambusia_affinis
ENSCSAVG00000011797	-	71	33.195	ENSGACG00000004483	rsl1d1	69	33.195	Gasterosteus_aculeatus
ENSCSAVG00000011797	-	72	33.735	ENSGGOG00000013463	RSL1D1	53	32.955	Gorilla_gorilla
ENSCSAVG00000011797	-	69	31.224	ENSHBUG00000001551	rsl1d1	65	31.224	Haplochromis_burtoni
ENSCSAVG00000011797	-	75	31.660	ENSHGLG00000006774	RSL1D1	59	31.939	Heterocephalus_glaber_female
ENSCSAVG00000011797	-	75	31.660	ENSHGLG00100017781	RSL1D1	59	31.939	Heterocephalus_glaber_male
ENSCSAVG00000011797	-	55	35.135	ENSSTOG00000015400	RSL1D1	55	33.613	Ictidomys_tridecemlineatus
ENSCSAVG00000011797	-	69	32.203	ENSKMAG00000021908	rsl1d1	65	32.203	Kryptolebias_marmoratus
ENSCSAVG00000011797	-	69	32.068	ENSLBEG00000001076	rsl1d1	75	31.061	Labrus_bergylta
ENSCSAVG00000011797	-	69	32.911	ENSLOCG00000007416	rsl1d1	63	32.090	Lepisosteus_oculatus
ENSCSAVG00000011797	-	70	33.333	ENSLAFG00000013664	RSL1D1	52	32.812	Loxodonta_africana
ENSCSAVG00000011797	-	71	34.286	ENSMFAG00000037288	RSL1D1	54	32.955	Macaca_fascicularis
ENSCSAVG00000011797	-	71	34.286	ENSMMUG00000019632	RSL1D1	97	37.821	Macaca_mulatta
ENSCSAVG00000011797	-	71	34.694	ENSMNEG00000044196	RSL1D1	54	33.333	Macaca_nemestrina
ENSCSAVG00000011797	-	71	33.878	ENSMLEG00000042058	RSL1D1	55	32.576	Mandrillus_leucophaeus
ENSCSAVG00000011797	-	72	31.148	ENSMAMG00000004385	rsl1d1	66	31.148	Mastacembelus_armatus
ENSCSAVG00000011797	-	69	31.646	ENSMZEG00005007150	rsl1d1	66	31.646	Maylandia_zebra
ENSCSAVG00000011797	-	68	34.199	ENSMGAG00000000863	RSL1D1	64	32.646	Meleagris_gallopavo
ENSCSAVG00000011797	-	69	33.761	ENSMICG00000008229	RSL1D1	57	32.872	Microcebus_murinus
ENSCSAVG00000011797	-	69	33.621	ENSMOCG00000017724	Rsl1d1	53	33.621	Microtus_ochrogaster
ENSCSAVG00000011797	-	72	30.488	ENSMMOG00000003730	rsl1d1	87	30.153	Mola_mola
ENSCSAVG00000011797	-	68	30.736	ENSMODG00000004625	-	50	30.736	Monodelphis_domestica
ENSCSAVG00000011797	-	69	32.906	ENSMPUG00000014548	RSL1D1	55	31.752	Mustela_putorius_furo
ENSCSAVG00000011797	-	69	33.476	ENSNGAG00000013578	-	58	32.319	Nannospalax_galili
ENSCSAVG00000011797	-	69	31.897	ENSNGAG00000009086	-	50	31.897	Nannospalax_galili
ENSCSAVG00000011797	-	69	32.068	ENSNBRG00000002777	rsl1d1	64	32.068	Neolamprologus_brichardi
ENSCSAVG00000011797	-	72	33.735	ENSNLEG00000010196	-	53	33.333	Nomascus_leucogenys
ENSCSAVG00000011797	-	71	32.794	ENSNLEG00000012149	-	69	31.955	Nomascus_leucogenys
ENSCSAVG00000011797	-	69	32.618	ENSOPRG00000004442	-	51	32.618	Ochotona_princeps
ENSCSAVG00000011797	-	69	31.646	ENSONIG00000019757	rsl1d1	67	31.646	Oreochromis_niloticus
ENSCSAVG00000011797	-	86	30.333	ENSOANG00000009408	-	70	30.333	Ornithorhynchus_anatinus
ENSCSAVG00000011797	-	72	32.530	ENSOCUG00000004751	RSL1D1	58	33.456	Oryctolagus_cuniculus
ENSCSAVG00000011797	-	69	31.646	ENSORLG00000002877	rsl1d1	75	30.189	Oryzias_latipes
ENSCSAVG00000011797	-	77	30.189	ENSORLG00015005427	rsl1d1	75	30.189	Oryzias_latipes_hsok
ENSCSAVG00000011797	-	72	32.520	ENSOMEG00000008036	rsl1d1	67	32.520	Oryzias_melastigma
ENSCSAVG00000011797	-	72	33.735	ENSPPAG00000039716	RSL1D1	53	32.955	Pan_paniscus
ENSCSAVG00000011797	-	69	34.615	ENSPPRG00000005220	RSL1D1	56	33.577	Panthera_pardus
ENSCSAVG00000011797	-	68	34.483	ENSPTIG00000005526	RSL1D1	55	33.840	Panthera_tigris_altaica
ENSCSAVG00000011797	-	72	34.137	ENSPTRG00000007777	RSL1D1	53	33.333	Pan_troglodytes
ENSCSAVG00000011797	-	71	34.286	ENSPANG00000023073	RSL1D1	54	32.955	Papio_anubis
ENSCSAVG00000011797	-	71	32.377	ENSPSIG00000011642	RSL1D1	58	31.461	Pelodiscus_sinensis
ENSCSAVG00000011797	-	76	32.171	ENSPMGG00000022261	rsl1d1	85	32.171	Periophthalmus_magnuspinnatus
ENSCSAVG00000011797	-	69	31.897	ENSPEMG00000009523	Rsl1d1	51	31.897	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011797	-	56	32.984	ENSPMAG00000005446	rsl1d1	51	32.456	Petromyzon_marinus
ENSCSAVG00000011797	-	71	30.705	ENSPCIG00000026851	-	60	30.705	Phascolarctos_cinereus
ENSCSAVG00000011797	-	71	32.500	ENSPFOG00000005017	rsl1d1	66	32.500	Poecilia_formosa
ENSCSAVG00000011797	-	70	32.911	ENSPLAG00000000482	rsl1d1	58	32.911	Poecilia_latipinna
ENSCSAVG00000011797	-	75	31.250	ENSPMEG00000007032	rsl1d1	65	32.083	Poecilia_mexicana
ENSCSAVG00000011797	-	72	30.328	ENSPREG00000016619	rsl1d1	70	30.112	Poecilia_reticulata
ENSCSAVG00000011797	-	72	34.137	ENSPPYG00000007112	RSL1D1	53	33.333	Pongo_abelii
ENSCSAVG00000011797	-	69	34.188	ENSPVAG00000005014	RSL1D1	57	33.212	Pteropus_vampyrus
ENSCSAVG00000011797	-	69	31.646	ENSPNYG00000002850	rsl1d1	65	31.646	Pundamilia_nyererei
ENSCSAVG00000011797	-	72	30.041	ENSPNAG00000011848	rsl1d1	77	30.303	Pygocentrus_nattereri
ENSCSAVG00000011797	-	75	31.373	ENSRNOG00000048608	Rsl1d1l1	55	31.373	Rattus_norvegicus
ENSCSAVG00000011797	-	75	31.373	ENSRNOG00000061236	LOC108348298	55	31.373	Rattus_norvegicus
ENSCSAVG00000011797	-	71	33.878	ENSRBIG00000030317	RSL1D1	54	32.576	Rhinopithecus_bieti
ENSCSAVG00000011797	-	71	33.878	ENSRROG00000033658	RSL1D1	54	32.576	Rhinopithecus_roxellana
ENSCSAVG00000011797	-	71	32.653	ENSSBOG00000035910	-	53	31.439	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011797	-	75	32.812	ENSSFOG00015011354	rsl1d1	73	32.812	Scleropages_formosus
ENSCSAVG00000011797	-	76	31.274	ENSSMAG00000007957	rsl1d1	73	30.916	Scophthalmus_maximus
ENSCSAVG00000011797	-	69	32.068	ENSSDUG00000008447	rsl1d1	70	31.186	Seriola_dumerili
ENSCSAVG00000011797	-	69	35.021	ENSSLDG00000008293	rsl1d1	70	33.585	Seriola_lalandi_dorsalis
ENSCSAVG00000011797	-	70	33.473	ENSSPUG00000007525	RSL1D1	64	30.976	Sphenodon_punctatus
ENSCSAVG00000011797	-	75	30.980	ENSSPAG00000009755	rsl1d1	75	30.717	Stegastes_partitus
ENSCSAVG00000011797	-	70	34.874	ENSTGUG00000005174	RSL1D1	96	34.874	Taeniopygia_guttata
ENSCSAVG00000011797	-	68	30.043	ENSTRUG00000016970	rsl1d1	65	30.043	Takifugu_rubripes
ENSCSAVG00000011797	-	68	30.901	ENSTNIG00000012925	rsl1d1	65	30.901	Tetraodon_nigroviridis
ENSCSAVG00000011797	-	69	34.188	ENSUAMG00000004470	RSL1D1	62	31.392	Ursus_americanus
ENSCSAVG00000011797	-	53	34.615	ENSUMAG00000003994	RSL1D1	55	31.128	Ursus_maritimus
ENSCSAVG00000011797	-	68	34.052	ENSXETG00000033365	-	62	32.441	Xenopus_tropicalis
ENSCSAVG00000011797	-	69	32.051	ENSXMAG00000025111	rsl1d1	67	32.051	Xiphophorus_maculatus