EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011811 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 753 bases
Position: chrreftig_1:6423547-6424299
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000020124	SBDS	PF01172.18	1.1e-33	1	1
ENSCSAVP00000020124	SBDS_C	PF09377.10	1.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000020340	-	753	-	ENSCSAVP00000020124	250 (aa)	-	H2ZRA8

Gene Model

Click here to download ENSCSAVG00000011811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011811	-	100	66.800	ENSG00000126524	SBDS	97	77.108	Homo_sapiens
ENSCSAVG00000011811	-	99	67.339	ENSAPOG00000014285	sbds	99	67.339	Acanthochromis_polyacanthus
ENSCSAVG00000011811	-	100	66.800	ENSAMEG00000018167	SBDS	99	66.800	Ailuropoda_melanoleuca
ENSCSAVG00000011811	-	99	67.331	ENSACIG00000007308	sbds	99	67.331	Amphilophus_citrinellus
ENSCSAVG00000011811	-	99	67.742	ENSAOCG00000016770	sbds	99	67.742	Amphiprion_ocellaris
ENSCSAVG00000011811	-	99	68.145	ENSAPEG00000015897	sbds	99	68.145	Amphiprion_percula
ENSCSAVG00000011811	-	100	67.200	ENSATEG00000006901	sbds	100	67.200	Anabas_testudineus
ENSCSAVG00000011811	-	93	63.362	ENSANAG00000024342	-	95	71.084	Aotus_nancymaae
ENSCSAVG00000011811	-	83	64.251	ENSANAG00000037501	-	99	64.251	Aotus_nancymaae
ENSCSAVG00000011811	-	99	67.742	ENSACLG00000018750	sbds	99	67.742	Astatotilapia_calliptera
ENSCSAVG00000011811	-	99	68.952	ENSAMXG00000005361	sbds	99	68.952	Astyanax_mexicanus
ENSCSAVG00000011811	-	100	66.800	ENSBTAG00000004051	SBDS	99	66.800	Bos_taurus
ENSCSAVG00000011811	-	98	55.466	WBGene00021063	sbds-1	97	55.466	Caenorhabditis_elegans
ENSCSAVG00000011811	-	100	66.400	ENSCJAG00000041007	SBDS	99	66.400	Callithrix_jacchus
ENSCSAVG00000011811	-	100	65.873	ENSCAFG00000010797	SBDS	99	65.873	Canis_familiaris
ENSCSAVG00000011811	-	100	66.800	ENSCAFG00020005357	SBDS	99	66.800	Canis_lupus_dingo
ENSCSAVG00000011811	-	100	67.200	ENSCHIG00000026854	SBDS	99	67.200	Capra_hircus
ENSCSAVG00000011811	-	100	66.800	ENSTSYG00000033822	SBDS	99	66.800	Carlito_syrichta
ENSCSAVG00000011811	-	66	62.805	ENSCAPG00000006634	SBDS	99	62.805	Cavia_aperea
ENSCSAVG00000011811	-	100	67.600	ENSCPOG00000036143	SBDS	99	67.600	Cavia_porcellus
ENSCSAVG00000011811	-	100	66.800	ENSCCAG00000020671	SBDS	93	77.108	Cebus_capucinus
ENSCSAVG00000011811	-	100	66.800	ENSCATG00000039026	SBDS	99	66.800	Cercocebus_atys
ENSCSAVG00000011811	-	99	50.602	ENSCLAG00000002113	-	99	50.602	Chinchilla_lanigera
ENSCSAVG00000011811	-	100	68.000	ENSCLAG00000005721	-	99	68.000	Chinchilla_lanigera
ENSCSAVG00000011811	-	100	66.800	ENSCSAG00000018275	SBDS	99	66.800	Chlorocebus_sabaeus
ENSCSAVG00000011811	-	100	63.600	ENSCHOG00000003795	SBDS	99	63.600	Choloepus_hoffmanni
ENSCSAVG00000011811	-	100	65.200	ENSCPBG00000014893	SBDS	99	65.200	Chrysemys_picta_bellii
ENSCSAVG00000011811	-	100	66.800	ENSCANG00000032368	SBDS	99	66.800	Colobus_angolensis_palliatus
ENSCSAVG00000011811	-	66	63.415	ENSCGRG00001019886	Sbds	99	63.415	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011811	-	83	65.700	ENSCGRG00000009211	Sbds	99	65.700	Cricetulus_griseus_crigri
ENSCSAVG00000011811	-	100	68.400	ENSCSEG00000005798	sbds	100	68.400	Cynoglossus_semilaevis
ENSCSAVG00000011811	-	99	68.952	ENSCVAG00000001053	sbds	99	68.952	Cyprinodon_variegatus
ENSCSAVG00000011811	-	99	67.742	ENSDARG00000027803	sbds	99	67.742	Danio_rerio
ENSCSAVG00000011811	-	100	66.400	ENSDNOG00000041174	SBDS	99	66.400	Dasypus_novemcinctus
ENSCSAVG00000011811	-	99	66.129	ENSDORG00000026218	Sbds	99	66.129	Dipodomys_ordii
ENSCSAVG00000011811	-	99	56.000	FBgn0035714	CG8549	99	56.000	Drosophila_melanogaster
ENSCSAVG00000011811	-	83	56.731	ENSEBUG00000015780	sbds	92	56.731	Eptatretus_burgeri
ENSCSAVG00000011811	-	100	66.800	ENSEASG00005008821	SBDS	99	66.800	Equus_asinus_asinus
ENSCSAVG00000011811	-	100	66.800	ENSECAG00000008202	SBDS	99	66.800	Equus_caballus
ENSCSAVG00000011811	-	84	53.110	ENSEEUG00000004768	SBDS	100	53.110	Erinaceus_europaeus
ENSCSAVG00000011811	-	99	67.742	ENSELUG00000008382	sbds	99	67.742	Esox_lucius
ENSCSAVG00000011811	-	100	66.800	ENSFCAG00000022142	SBDS	99	66.800	Felis_catus
ENSCSAVG00000011811	-	99	66.532	ENSFALG00000013808	SBDS	99	66.532	Ficedula_albicollis
ENSCSAVG00000011811	-	100	67.600	ENSFDAG00000018947	-	99	67.600	Fukomys_damarensis
ENSCSAVG00000011811	-	100	67.200	ENSFHEG00000000708	sbds	100	67.200	Fundulus_heteroclitus
ENSCSAVG00000011811	-	99	65.726	ENSGMOG00000018356	sbds	98	65.726	Gadus_morhua
ENSCSAVG00000011811	-	99	66.129	ENSGALG00000027989	SBDS	99	66.129	Gallus_gallus
ENSCSAVG00000011811	-	92	64.629	ENSGAFG00000014204	sbds	99	64.629	Gambusia_affinis
ENSCSAVG00000011811	-	100	66.000	ENSGACG00000012697	sbds	100	66.000	Gasterosteus_aculeatus
ENSCSAVG00000011811	-	86	63.084	ENSGAGG00000022402	SBDS	99	63.084	Gopherus_agassizii
ENSCSAVG00000011811	-	96	51.452	ENSGGOG00000040023	-	92	51.452	Gorilla_gorilla
ENSCSAVG00000011811	-	99	67.742	ENSHBUG00000002660	sbds	99	67.742	Haplochromis_burtoni
ENSCSAVG00000011811	-	100	67.600	ENSHGLG00000009671	SBDS	99	67.600	Heterocephalus_glaber_female
ENSCSAVG00000011811	-	100	67.600	ENSHGLG00100011332	SBDS	99	67.600	Heterocephalus_glaber_male
ENSCSAVG00000011811	-	99	66.935	ENSHCOG00000018606	sbds	99	66.935	Hippocampus_comes
ENSCSAVG00000011811	-	100	69.200	ENSIPUG00000006536	sbds	99	69.200	Ictalurus_punctatus
ENSCSAVG00000011811	-	100	66.800	ENSJJAG00000012033	-	99	66.800	Jaculus_jaculus
ENSCSAVG00000011811	-	100	48.221	ENSJJAG00000003934	-	99	48.221	Jaculus_jaculus
ENSCSAVG00000011811	-	99	68.145	ENSKMAG00000018542	sbds	99	68.145	Kryptolebias_marmoratus
ENSCSAVG00000011811	-	99	67.742	ENSLBEG00000016687	sbds	99	67.742	Labrus_bergylta
ENSCSAVG00000011811	-	99	57.812	ENSLACG00000018916	SBDS	99	57.812	Latimeria_chalumnae
ENSCSAVG00000011811	-	100	66.800	ENSLOCG00000004073	sbds	99	66.800	Lepisosteus_oculatus
ENSCSAVG00000011811	-	99	66.935	ENSLAFG00000008763	SBDS	99	66.935	Loxodonta_africana
ENSCSAVG00000011811	-	100	66.800	ENSMFAG00000032620	SBDS	99	66.800	Macaca_fascicularis
ENSCSAVG00000011811	-	100	66.800	ENSMMUG00000045653	SBDS	99	66.800	Macaca_mulatta
ENSCSAVG00000011811	-	100	66.800	ENSMNEG00000031523	SBDS	99	66.800	Macaca_nemestrina
ENSCSAVG00000011811	-	100	54.331	ENSMLEG00000036826	SBDS	99	54.331	Mandrillus_leucophaeus
ENSCSAVG00000011811	-	99	66.935	ENSMAMG00000016062	sbds	99	66.935	Mastacembelus_armatus
ENSCSAVG00000011811	-	99	67.742	ENSMZEG00005024385	sbds	99	67.742	Maylandia_zebra
ENSCSAVG00000011811	-	99	66.129	ENSMGAG00000002119	SBDS	99	66.129	Meleagris_gallopavo
ENSCSAVG00000011811	-	99	56.048	ENSMAUG00000022214	-	99	56.048	Mesocricetus_auratus
ENSCSAVG00000011811	-	100	67.200	ENSMICG00000014366	SBDS	99	67.200	Microcebus_murinus
ENSCSAVG00000011811	-	100	67.600	ENSMOCG00000011739	Sbds	99	67.600	Microtus_ochrogaster
ENSCSAVG00000011811	-	99	60.714	ENSMMOG00000005061	sbds	99	61.111	Mola_mola
ENSCSAVG00000011811	-	100	66.800	ENSMODG00000006644	SBDS	99	66.800	Monodelphis_domestica
ENSCSAVG00000011811	-	99	65.323	ENSMALG00000010219	sbds	99	65.323	Monopterus_albus
ENSCSAVG00000011811	-	100	67.200	MGP_CAROLIEiJ_G0027800	Sbds	98	80.952	Mus_caroli
ENSCSAVG00000011811	-	100	66.800	ENSMUSG00000025337	Sbds	98	80.952	Mus_musculus
ENSCSAVG00000011811	-	100	67.200	MGP_PahariEiJ_G0024384	Sbds	98	80.952	Mus_pahari
ENSCSAVG00000011811	-	100	66.800	MGP_SPRETEiJ_G0028798	Sbds	98	80.952	Mus_spretus
ENSCSAVG00000011811	-	66	62.651	ENSMPUG00000016192	SBDS	95	62.651	Mustela_putorius_furo
ENSCSAVG00000011811	-	73	62.637	ENSMLUG00000013575	SBDS	99	62.637	Myotis_lucifugus
ENSCSAVG00000011811	-	99	67.339	ENSNGAG00000012093	Sbds	99	67.339	Nannospalax_galili
ENSCSAVG00000011811	-	99	67.742	ENSNBRG00000017027	sbds	99	67.742	Neolamprologus_brichardi
ENSCSAVG00000011811	-	100	66.800	ENSNLEG00000013288	SBDS	91	75.000	Nomascus_leucogenys
ENSCSAVG00000011811	-	100	67.600	ENSOPRG00000008721	SBDS	99	67.600	Ochotona_princeps
ENSCSAVG00000011811	-	99	51.210	ENSODEG00000000137	-	83	53.226	Octodon_degus
ENSCSAVG00000011811	-	99	60.887	ENSODEG00000019253	-	83	60.887	Octodon_degus
ENSCSAVG00000011811	-	99	51.613	ENSODEG00000001116	-	99	51.613	Octodon_degus
ENSCSAVG00000011811	-	99	68.145	ENSONIG00000005874	sbds	99	68.145	Oreochromis_niloticus
ENSCSAVG00000011811	-	83	61.836	ENSOANG00000007674	-	99	61.836	Ornithorhynchus_anatinus
ENSCSAVG00000011811	-	100	68.000	ENSOCUG00000003170	SBDS	99	68.000	Oryctolagus_cuniculus
ENSCSAVG00000011811	-	99	68.145	ENSORLG00000023489	sbds	99	68.145	Oryzias_latipes
ENSCSAVG00000011811	-	99	68.548	ENSORLG00020019282	sbds	99	68.548	Oryzias_latipes_hni
ENSCSAVG00000011811	-	99	68.548	ENSORLG00015008005	sbds	99	68.548	Oryzias_latipes_hsok
ENSCSAVG00000011811	-	99	69.355	ENSOMEG00000022747	sbds	99	69.355	Oryzias_melastigma
ENSCSAVG00000011811	-	99	57.258	ENSOGAG00000015036	-	99	57.258	Otolemur_garnettii
ENSCSAVG00000011811	-	100	66.800	ENSOGAG00000009011	-	99	66.800	Otolemur_garnettii
ENSCSAVG00000011811	-	100	67.200	ENSOARG00000010609	SBDS	99	67.200	Ovis_aries
ENSCSAVG00000011811	-	100	66.000	ENSPPAG00000043889	-	99	66.000	Pan_paniscus
ENSCSAVG00000011811	-	100	66.800	ENSPPRG00000002307	SBDS	99	66.800	Panthera_pardus
ENSCSAVG00000011811	-	100	66.800	ENSPTIG00000021308	SBDS	99	66.800	Panthera_tigris_altaica
ENSCSAVG00000011811	-	100	56.400	ENSPTRG00000047744	-	99	56.400	Pan_troglodytes
ENSCSAVG00000011811	-	100	56.400	ENSPTRG00000050835	-	99	56.400	Pan_troglodytes
ENSCSAVG00000011811	-	100	66.800	ENSPTRG00000019254	SBDS	99	66.800	Pan_troglodytes
ENSCSAVG00000011811	-	84	68.571	ENSPTRG00000048174	-	93	68.571	Pan_troglodytes
ENSCSAVG00000011811	-	100	66.800	ENSPANG00000004078	SBDS	99	66.800	Papio_anubis
ENSCSAVG00000011811	-	99	66.935	ENSPKIG00000006489	sbds	99	66.935	Paramormyrops_kingsleyae
ENSCSAVG00000011811	-	83	63.942	ENSPSIG00000014603	SBDS	99	63.942	Pelodiscus_sinensis
ENSCSAVG00000011811	-	99	67.339	ENSPMGG00000004246	sbds	99	67.339	Periophthalmus_magnuspinnatus
ENSCSAVG00000011811	-	99	67.339	ENSPEMG00000008728	Sbds	99	67.339	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011811	-	100	67.200	ENSPCIG00000029718	SBDS	99	67.200	Phascolarctos_cinereus
ENSCSAVG00000011811	-	99	68.145	ENSPFOG00000015837	sbds	99	68.145	Poecilia_formosa
ENSCSAVG00000011811	-	99	67.742	ENSPLAG00000003641	sbds	99	67.742	Poecilia_latipinna
ENSCSAVG00000011811	-	99	68.145	ENSPMEG00000019483	sbds	99	68.145	Poecilia_mexicana
ENSCSAVG00000011811	-	99	67.742	ENSPREG00000018758	sbds	99	67.742	Poecilia_reticulata
ENSCSAVG00000011811	-	100	66.800	ENSPPYG00000017513	SBDS	99	66.800	Pongo_abelii
ENSCSAVG00000011811	-	100	66.800	ENSPCOG00000021098	SBDS	99	66.800	Propithecus_coquereli
ENSCSAVG00000011811	-	100	67.200	ENSPVAG00000009369	SBDS	99	67.200	Pteropus_vampyrus
ENSCSAVG00000011811	-	99	68.145	ENSPNYG00000022403	sbds	99	68.145	Pundamilia_nyererei
ENSCSAVG00000011811	-	99	68.145	ENSPNAG00000001120	sbds	99	68.145	Pygocentrus_nattereri
ENSCSAVG00000011811	-	100	67.200	ENSRNOG00000000888	Sbds	99	67.200	Rattus_norvegicus
ENSCSAVG00000011811	-	100	66.800	ENSRBIG00000035557	SBDS	99	66.800	Rhinopithecus_bieti
ENSCSAVG00000011811	-	100	66.800	ENSRROG00000040842	-	99	66.800	Rhinopithecus_roxellana
ENSCSAVG00000011811	-	100	55.600	ENSRROG00000041986	-	99	55.600	Rhinopithecus_roxellana
ENSCSAVG00000011811	-	98	41.502	YLR022C	-	99	41.502	Saccharomyces_cerevisiae
ENSCSAVG00000011811	-	93	64.655	ENSSBOG00000022460	SBDS	99	64.655	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011811	-	100	57.200	ENSSHAG00000010263	SBDS	99	57.200	Sarcophilus_harrisii
ENSCSAVG00000011811	-	99	67.742	ENSSFOG00015001108	sbds	99	67.742	Scleropages_formosus
ENSCSAVG00000011811	-	100	66.000	ENSSMAG00000020506	sbds	100	66.000	Scophthalmus_maximus
ENSCSAVG00000011811	-	99	66.532	ENSSDUG00000001528	sbds	99	66.532	Seriola_dumerili
ENSCSAVG00000011811	-	99	66.129	ENSSLDG00000003659	sbds	99	66.129	Seriola_lalandi_dorsalis
ENSCSAVG00000011811	-	62	73.377	ENSSARG00000013132	-	100	73.377	Sorex_araneus
ENSCSAVG00000011811	-	72	76.744	ENSSARG00000001899	-	72	76.744	Sorex_araneus
ENSCSAVG00000011811	-	100	64.800	ENSSPUG00000002699	SBDS	99	64.800	Sphenodon_punctatus
ENSCSAVG00000011811	-	99	67.742	ENSSPAG00000016419	sbds	99	60.887	Stegastes_partitus
ENSCSAVG00000011811	-	100	66.800	ENSSSCG00000007732	SBDS	99	66.800	Sus_scrofa
ENSCSAVG00000011811	-	65	63.190	ENSTGUG00000003426	SBDS	98	63.190	Taeniopygia_guttata
ENSCSAVG00000011811	-	100	67.200	ENSTRUG00000021443	sbds	100	67.200	Takifugu_rubripes
ENSCSAVG00000011811	-	99	66.532	ENSTNIG00000019000	sbds	99	66.532	Tetraodon_nigroviridis
ENSCSAVG00000011811	-	84	57.895	ENSTBEG00000001178	SBDS	100	57.895	Tupaia_belangeri
ENSCSAVG00000011811	-	99	52.823	ENSTTRG00000003921	SBDS	99	52.823	Tursiops_truncatus
ENSCSAVG00000011811	-	100	66.800	ENSUAMG00000001326	SBDS	99	66.800	Ursus_americanus
ENSCSAVG00000011811	-	100	66.800	ENSUMAG00000015353	SBDS	99	66.800	Ursus_maritimus
ENSCSAVG00000011811	-	100	66.800	ENSVVUG00000016478	SBDS	99	66.800	Vulpes_vulpes
ENSCSAVG00000011811	-	100	68.000	ENSXETG00000010093	sbds	99	68.000	Xenopus_tropicalis
ENSCSAVG00000011811	-	99	62.903	ENSXCOG00000010639	sbds	99	62.903	Xiphophorus_couchianus
ENSCSAVG00000011811	-	99	68.145	ENSXMAG00000006065	sbds	99	68.145	Xiphophorus_maculatus