EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000011819 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 5635 bases
Position: chrreftig_1:6514189-6519823
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000020134	RRS1	PF04939.12	4.8e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000020350	-	1201	-	ENSCSAVP00000020134	324 (aa)	-	H2ZRB8

Gene Model

Click here to download ENSCSAVG00000011819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011819's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011819	-	96	47.468	ENSG00000179041	RRS1	87	47.678	Homo_sapiens
ENSCSAVG00000011819	-	96	54.662	ENSATEG00000011743	rrs1	91	53.870	Anabas_testudineus
ENSCSAVG00000011819	-	98	48.916	ENSANAG00000018116	RRS1	87	48.916	Aotus_nancymaae
ENSCSAVG00000011819	-	90	50.690	ENSAMXG00000037893	rrs1	82	48.265	Astyanax_mexicanus
ENSCSAVG00000011819	-	96	47.468	ENSBTAG00000016716	RRS1	85	47.468	Bos_taurus
ENSCSAVG00000011819	-	82	45.848	WBGene00007617	rrbs-1	81	45.848	Caenorhabditis_elegans
ENSCSAVG00000011819	-	98	47.368	ENSCJAG00000022034	RRS1	87	47.368	Callithrix_jacchus
ENSCSAVG00000011819	-	89	49.315	ENSCAFG00000007313	RRS1	87	47.368	Canis_familiaris
ENSCSAVG00000011819	-	89	49.315	ENSCAFG00020020365	-	87	47.368	Canis_lupus_dingo
ENSCSAVG00000011819	-	89	49.315	ENSCAFG00020016049	-	87	47.368	Canis_lupus_dingo
ENSCSAVG00000011819	-	96	47.799	ENSCHIG00000009141	RRS1	87	48.000	Capra_hircus
ENSCSAVG00000011819	-	89	50.000	ENSCPOG00000000647	RRS1	91	48.024	Cavia_porcellus
ENSCSAVG00000011819	-	89	49.655	ENSCCAG00000032186	RRS1	79	49.655	Cebus_capucinus
ENSCSAVG00000011819	-	96	47.152	ENSCATG00000016944	RRS1	87	47.368	Cercocebus_atys
ENSCSAVG00000011819	-	96	47.152	ENSCSAG00000018552	RRS1	87	47.059	Chlorocebus_sabaeus
ENSCSAVG00000011819	-	96	47.785	ENSCHOG00000002455	RRS1	87	47.988	Choloepus_hoffmanni
ENSCSAVG00000011819	-	98	40.184	ENSCPBG00000021374	RRS1	90	40.184	Chrysemys_picta_bellii
ENSCSAVG00000011819	-	100	82.099	ENSCING00000002177	-	100	82.099	Ciona_intestinalis
ENSCSAVG00000011819	-	96	47.468	ENSCANG00000012718	RRS1	85	47.468	Colobus_angolensis_palliatus
ENSCSAVG00000011819	-	89	49.658	ENSCGRG00001015575	-	91	47.664	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011819	-	89	49.315	ENSCGRG00001002391	-	79	49.315	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011819	-	89	44.138	ENSCSEG00000014750	rrs1	87	42.947	Cynoglossus_semilaevis
ENSCSAVG00000011819	-	93	43.046	ENSCVAG00000017878	rrs1	91	42.056	Cyprinodon_variegatus
ENSCSAVG00000011819	-	89	53.979	ENSDARG00000003941	rrs1	98	50.000	Danio_rerio
ENSCSAVG00000011819	-	89	49.658	ENSDNOG00000017900	RRS1	86	47.352	Dasypus_novemcinctus
ENSCSAVG00000011819	-	69	49.558	ENSDORG00000026331	Rrs1	86	49.785	Dipodomys_ordii
ENSCSAVG00000011819	-	90	43.960	FBgn0052409	CG32409	89	43.168	Drosophila_melanogaster
ENSCSAVG00000011819	-	58	51.053	ENSETEG00000000935	-	52	51.053	Echinops_telfairi
ENSCSAVG00000011819	-	92	50.820	ENSEBUG00000013506	rrs1	99	48.311	Eptatretus_burgeri
ENSCSAVG00000011819	-	96	47.468	ENSEASG00005001691	RRS1	87	47.678	Equus_asinus_asinus
ENSCSAVG00000011819	-	89	49.315	ENSECAG00000004492	RRS1	86	49.315	Equus_caballus
ENSCSAVG00000011819	-	89	48.288	ENSEEUG00000013719	RRS1	87	46.417	Erinaceus_europaeus
ENSCSAVG00000011819	-	89	49.481	ENSFCAG00000014332	RRS1	87	47.500	Felis_catus
ENSCSAVG00000011819	-	90	41.391	ENSGALG00000030890	RRS1	89	40.719	Gallus_gallus
ENSCSAVG00000011819	-	89	51.903	ENSGACG00000002969	rrs1	88	50.158	Gasterosteus_aculeatus
ENSCSAVG00000011819	-	98	41.284	ENSGAGG00000023718	RRS1	87	41.590	Gopherus_agassizii
ENSCSAVG00000011819	-	96	47.468	ENSGGOG00000026663	RRS1	87	47.678	Gorilla_gorilla
ENSCSAVG00000011819	-	98	47.678	ENSHGLG00000021423	RRS1	87	47.678	Heterocephalus_glaber_female
ENSCSAVG00000011819	-	98	47.678	ENSHGLG00100020640	RRS1	87	47.678	Heterocephalus_glaber_male
ENSCSAVG00000011819	-	98	49.558	ENSHCOG00000015358	rrs1	94	49.558	Hippocampus_comes
ENSCSAVG00000011819	-	90	52.901	ENSIPUG00000014412	rrs1	94	50.606	Ictalurus_punctatus
ENSCSAVG00000011819	-	89	49.658	ENSSTOG00000026310	RRS1	79	49.658	Ictidomys_tridecemlineatus
ENSCSAVG00000011819	-	84	45.091	ENSJJAG00000020395	-	79	45.091	Jaculus_jaculus
ENSCSAVG00000011819	-	89	49.481	ENSJJAG00000011507	-	86	47.170	Jaculus_jaculus
ENSCSAVG00000011819	-	89	52.431	ENSKMAG00000008238	rrs1	95	49.845	Kryptolebias_marmoratus
ENSCSAVG00000011819	-	93	54.485	ENSLACG00000004058	RRS1	96	53.605	Latimeria_chalumnae
ENSCSAVG00000011819	-	94	54.426	ENSLOCG00000017812	rrs1	88	54.605	Lepisosteus_oculatus
ENSCSAVG00000011819	-	96	48.418	ENSLAFG00000015405	RRS1	86	48.297	Loxodonta_africana
ENSCSAVG00000011819	-	96	47.468	ENSMFAG00000042747	RRS1	87	47.368	Macaca_fascicularis
ENSCSAVG00000011819	-	96	47.468	ENSMMUG00000000886	RRS1	87	47.368	Macaca_mulatta
ENSCSAVG00000011819	-	96	47.468	ENSMNEG00000011696	RRS1	87	47.368	Macaca_nemestrina
ENSCSAVG00000011819	-	96	47.152	ENSMLEG00000004794	RRS1	87	47.368	Mandrillus_leucophaeus
ENSCSAVG00000011819	-	89	55.556	ENSMZEG00005004349	RRS1	87	54.167	Maylandia_zebra
ENSCSAVG00000011819	-	89	49.658	ENSMAUG00000005392	Rrs1	79	49.658	Mesocricetus_auratus
ENSCSAVG00000011819	-	98	47.678	ENSMOCG00000015862	Rrs1	82	47.678	Microtus_ochrogaster
ENSCSAVG00000011819	-	97	47.950	ENSMODG00000024952	RRS1	84	48.052	Monodelphis_domestica
ENSCSAVG00000011819	-	99	47.692	MGP_CAROLIEiJ_G0013936	Rrs1	88	47.692	Mus_caroli
ENSCSAVG00000011819	-	99	47.692	ENSMUSG00000061024	Rrs1	87	47.692	Mus_musculus
ENSCSAVG00000011819	-	99	47.077	MGP_PahariEiJ_G0023883	Rrs1	87	47.077	Mus_pahari
ENSCSAVG00000011819	-	99	47.692	MGP_SPRETEiJ_G0014739	Rrs1	87	47.692	Mus_spretus
ENSCSAVG00000011819	-	98	48.297	ENSMPUG00000018626	RRS1	85	48.297	Mustela_putorius_furo
ENSCSAVG00000011819	-	89	48.973	ENSNGAG00000012904	Rrs1	90	46.687	Nannospalax_galili
ENSCSAVG00000011819	-	69	50.661	ENSNLEG00000027730	RRS1	83	48.450	Nomascus_leucogenys
ENSCSAVG00000011819	-	90	54.949	ENSONIG00000014187	rrs1	91	53.797	Oreochromis_niloticus
ENSCSAVG00000011819	-	97	43.038	ENSOANG00000012348	RRS1	85	43.038	Ornithorhynchus_anatinus
ENSCSAVG00000011819	-	89	49.658	ENSOCUG00000013490	RRS1	89	48.193	Oryctolagus_cuniculus
ENSCSAVG00000011819	-	95	44.481	ENSOMEG00000008525	rrs1	90	44.479	Oryzias_melastigma
ENSCSAVG00000011819	-	98	47.368	ENSOGAG00000001085	RRS1	87	47.368	Otolemur_garnettii
ENSCSAVG00000011819	-	89	45.548	ENSOARG00000017417	RRS1	77	45.548	Ovis_aries
ENSCSAVG00000011819	-	96	47.799	ENSPPAG00000024378	RRS1	87	48.000	Pan_paniscus
ENSCSAVG00000011819	-	89	49.315	ENSPPRG00000021408	RRS1	87	47.678	Panthera_pardus
ENSCSAVG00000011819	-	96	47.484	ENSPTRG00000030988	RRS1	87	47.692	Pan_troglodytes
ENSCSAVG00000011819	-	89	35.764	ENSPANG00000035974	RRS1	84	35.737	Papio_anubis
ENSCSAVG00000011819	-	90	54.452	ENSPKIG00000007953	rrs1	84	55.017	Paramormyrops_kingsleyae
ENSCSAVG00000011819	-	89	49.315	ENSPEMG00000014427	Rrs1	79	49.315	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011819	-	90	50.512	ENSPMAG00000006513	rrs1	77	50.512	Petromyzon_marinus
ENSCSAVG00000011819	-	94	48.366	ENSPCIG00000026695	RRS1	87	48.265	Phascolarctos_cinereus
ENSCSAVG00000011819	-	89	56.401	ENSPFOG00000020722	rrs1	95	54.662	Poecilia_formosa
ENSCSAVG00000011819	-	89	45.172	ENSPREG00000019960	rrs1	80	44.710	Poecilia_reticulata
ENSCSAVG00000011819	-	89	49.660	ENSPPYG00000018637	RRS1	97	49.660	Pongo_abelii
ENSCSAVG00000011819	-	98	47.059	ENSPCAG00000009115	RRS1	87	47.368	Procavia_capensis
ENSCSAVG00000011819	-	88	54.895	ENSPNAG00000021707	rrs1	95	50.595	Pygocentrus_nattereri
ENSCSAVG00000011819	-	89	49.658	ENSRNOG00000007240	Rrs1	87	47.368	Rattus_norvegicus
ENSCSAVG00000011819	-	96	47.152	ENSRBIG00000009132	RRS1	87	47.368	Rhinopithecus_bieti
ENSCSAVG00000011819	-	96	47.152	ENSRROG00000013472	RRS1	87	47.368	Rhinopithecus_roxellana
ENSCSAVG00000011819	-	52	38.220	YOR294W	-	75	42.857	Saccharomyces_cerevisiae
ENSCSAVG00000011819	-	89	48.973	ENSSBOG00000011006	-	90	47.059	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011819	-	89	48.973	ENSSBOG00000012639	-	90	47.368	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011819	-	89	39.310	ENSSFOG00015015772	rrs1	88	39.117	Scleropages_formosus
ENSCSAVG00000011819	-	89	54.167	ENSSMAG00000015226	rrs1	85	52.581	Scophthalmus_maximus
ENSCSAVG00000011819	-	76	46.957	ENSSARG00000006976	RRS1	69	46.957	Sorex_araneus
ENSCSAVG00000011819	-	96	48.101	ENSSSCG00000006214	RRS1	87	47.988	Sus_scrofa
ENSCSAVG00000011819	-	94	52.885	ENSTRUG00000008796	rrs1	96	52.351	Takifugu_rubripes
ENSCSAVG00000011819	-	84	54.212	ENSTNIG00000004026	rrs1	93	52.050	Tetraodon_nigroviridis
ENSCSAVG00000011819	-	96	47.785	ENSTBEG00000014752	RRS1	87	47.988	Tupaia_belangeri
ENSCSAVG00000011819	-	98	47.678	ENSUAMG00000008502	RRS1	87	47.678	Ursus_americanus
ENSCSAVG00000011819	-	89	49.315	ENSVVUG00000018452	RRS1	87	47.368	Vulpes_vulpes
ENSCSAVG00000011819	-	89	55.172	ENSXCOG00000009809	rrs1	87	53.698	Xiphophorus_couchianus