EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000000131 (Gene tree)
Gene ID: 103383511
Gene Symbol: tfb1m
Alias: im:7151479|zgc:153625
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 32912 bases
Position: chr1:2616476-2649387
Accession: 103383511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000000146	RrnaAD	PF00398.20	3.9e-41	1	1
ENSCSEP00000000144	RrnaAD	PF00398.20	2.1e-40	1	1
ENSCSEP00000000145	RrnaAD	PF00398.20	2.1e-40	1	1
ENSCSEP00000000143	RrnaAD	PF00398.20	6.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000000167	-	3996	-	ENSCSEP00000000143	383 (aa)	-	-
ENSCSET00000000170	-	1041	-	ENSCSEP00000000146	346 (aa)	-	-
ENSCSET00000000168	-	3909	XM_008316975	ENSCSEP00000000144	354 (aa)	XP_008315197	UPI000497A5EA
ENSCSET00000000169	-	1191	XM_008316693	ENSCSEP00000000145	354 (aa)	XP_008314915	UPI000497A5EA

Gene Model

Click here to download ENSCSEG00000000131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000131's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000131	tfb1m	96	69.501	ENSG00000029639	TFB1M	99	69.501	Homo_sapiens
ENSCSEG00000000131	tfb1m	99	79.832	ENSAPOG00000015493	tfb1m	100	79.832	Acanthochromis_polyacanthus
ENSCSEG00000000131	tfb1m	96	67.847	ENSAMEG00000012761	TFB1M	98	67.847	Ailuropoda_melanoleuca
ENSCSEG00000000131	tfb1m	99	79.370	ENSACIG00000014290	tfb1m	99	79.370	Amphilophus_citrinellus
ENSCSEG00000000131	tfb1m	99	79.272	ENSAOCG00000004027	tfb1m	100	79.272	Amphiprion_ocellaris
ENSCSEG00000000131	tfb1m	99	79.272	ENSAPEG00000020359	tfb1m	100	79.272	Amphiprion_percula
ENSCSEG00000000131	tfb1m	99	79.545	ENSATEG00000006826	tfb1m	99	79.545	Anabas_testudineus
ENSCSEG00000000131	tfb1m	96	66.569	ENSAPLG00000006328	TFB1M	98	66.569	Anas_platyrhynchos
ENSCSEG00000000131	tfb1m	50	30.939	ENSACAG00000008504	DIMT1	60	32.370	Anolis_carolinensis
ENSCSEG00000000131	tfb1m	96	68.622	ENSACAG00000005244	TFB1M	99	68.622	Anolis_carolinensis
ENSCSEG00000000131	tfb1m	93	71.429	ENSANAG00000021469	TFB1M	97	70.833	Aotus_nancymaae
ENSCSEG00000000131	tfb1m	98	81.662	ENSACLG00000018734	tfb1m	97	81.662	Astatotilapia_calliptera
ENSCSEG00000000131	tfb1m	95	74.551	ENSAMXG00000036128	tfb1m	91	75.449	Astyanax_mexicanus
ENSCSEG00000000131	tfb1m	95	69.436	ENSBTAG00000031895	TFB1M	98	75.225	Bos_taurus
ENSCSEG00000000131	tfb1m	57	31.313	WBGene00008455	E02H1.1	59	31.313	Caenorhabditis_elegans
ENSCSEG00000000131	tfb1m	93	42.943	WBGene00020189	tfbm-1	89	42.943	Caenorhabditis_elegans
ENSCSEG00000000131	tfb1m	94	71.557	ENSCJAG00000012540	TFB1M	97	71.557	Callithrix_jacchus
ENSCSEG00000000131	tfb1m	95	69.643	ENSCAFG00000000581	TFB1M	97	69.643	Canis_familiaris
ENSCSEG00000000131	tfb1m	95	69.643	ENSCAFG00020015224	TFB1M	97	69.643	Canis_lupus_dingo
ENSCSEG00000000131	tfb1m	95	70.920	ENSCHIG00000017013	TFB1M	99	70.920	Capra_hircus
ENSCSEG00000000131	tfb1m	96	69.388	ENSTSYG00000012298	TFB1M	99	69.388	Carlito_syrichta
ENSCSEG00000000131	tfb1m	68	50.855	ENSCAPG00000013843	TFB1M	81	62.025	Cavia_aperea
ENSCSEG00000000131	tfb1m	97	68.421	ENSCPOG00000030422	TFB1M	99	68.421	Cavia_porcellus
ENSCSEG00000000131	tfb1m	95	70.238	ENSCCAG00000015250	TFB1M	97	70.238	Cebus_capucinus
ENSCSEG00000000131	tfb1m	76	75.000	ENSCATG00000009009	TFB1M	92	75.000	Cercocebus_atys
ENSCSEG00000000131	tfb1m	94	69.461	ENSCLAG00000004500	TFB1M	97	69.461	Chinchilla_lanigera
ENSCSEG00000000131	tfb1m	91	70.588	ENSCSAG00000013259	TFB1M	99	68.915	Chlorocebus_sabaeus
ENSCSEG00000000131	tfb1m	95	67.062	ENSCHOG00000011245	TFB1M	97	67.062	Choloepus_hoffmanni
ENSCSEG00000000131	tfb1m	93	71.646	ENSCPBG00000016320	TFB1M	96	71.646	Chrysemys_picta_bellii
ENSCSEG00000000131	tfb1m	86	46.254	ENSCING00000003901	-	80	46.254	Ciona_intestinalis
ENSCSEG00000000131	tfb1m	93	45.161	ENSCSAVG00000004721	-	89	45.161	Ciona_savignyi
ENSCSEG00000000131	tfb1m	95	70.536	ENSCANG00000029768	TFB1M	99	70.536	Colobus_angolensis_palliatus
ENSCSEG00000000131	tfb1m	95	67.857	ENSCGRG00001022866	Tfb1m	98	67.857	Cricetulus_griseus_chok1gshd
ENSCSEG00000000131	tfb1m	91	68.224	ENSCGRG00000018084	Tfb1m	98	68.224	Cricetulus_griseus_crigri
ENSCSEG00000000131	tfb1m	99	78.754	ENSCVAG00000009201	tfb1m	100	78.754	Cyprinodon_variegatus
ENSCSEG00000000131	tfb1m	95	73.353	ENSDARG00000040727	tfb1m	98	80.303	Danio_rerio
ENSCSEG00000000131	tfb1m	96	65.988	ENSDNOG00000015984	-	95	65.988	Dasypus_novemcinctus
ENSCSEG00000000131	tfb1m	79	59.643	ENSDNOG00000032672	-	97	59.643	Dasypus_novemcinctus
ENSCSEG00000000131	tfb1m	95	68.657	ENSDORG00000012938	Tfb1m	96	68.657	Dipodomys_ordii
ENSCSEG00000000131	tfb1m	89	48.580	FBgn0261381	mtTFB1	95	48.580	Drosophila_melanogaster
ENSCSEG00000000131	tfb1m	97	47.522	ENSETEG00000005709	TFB1M	99	47.522	Echinops_telfairi
ENSCSEG00000000131	tfb1m	90	54.545	ENSEBUG00000010530	tfb1m	95	52.367	Eptatretus_burgeri
ENSCSEG00000000131	tfb1m	58	30.806	ENSEBUG00000006158	dimt1l	79	30.806	Eptatretus_burgeri
ENSCSEG00000000131	tfb1m	97	67.449	ENSEASG00005018887	TFB1M	98	68.328	Equus_asinus_asinus
ENSCSEG00000000131	tfb1m	97	67.155	ENSECAG00000020997	TFB1M	98	68.035	Equus_caballus
ENSCSEG00000000131	tfb1m	92	73.089	ENSEEUG00000014899	TFB1M	97	73.089	Erinaceus_europaeus
ENSCSEG00000000131	tfb1m	94	79.641	ENSELUG00000002752	tfb1m	85	79.641	Esox_lucius
ENSCSEG00000000131	tfb1m	96	68.824	ENSFCAG00000038785	TFB1M	98	68.824	Felis_catus
ENSCSEG00000000131	tfb1m	97	66.082	ENSFALG00000012500	TFB1M	98	66.569	Ficedula_albicollis
ENSCSEG00000000131	tfb1m	90	71.562	ENSFDAG00000016985	TFB1M	97	69.697	Fukomys_damarensis
ENSCSEG00000000131	tfb1m	99	79.037	ENSFHEG00000008407	tfb1m	100	79.037	Fundulus_heteroclitus
ENSCSEG00000000131	tfb1m	95	82.840	ENSGMOG00000018738	tfb1m	97	82.840	Gadus_morhua
ENSCSEG00000000131	tfb1m	92	69.018	ENSGALG00000013647	TFB1M	93	69.018	Gallus_gallus
ENSCSEG00000000131	tfb1m	99	78.754	ENSGAFG00000017997	tfb1m	100	78.754	Gambusia_affinis
ENSCSEG00000000131	tfb1m	99	80.226	ENSGACG00000006884	tfb1m	100	80.226	Gasterosteus_aculeatus
ENSCSEG00000000131	tfb1m	95	68.955	ENSGAGG00000025345	TFB1M	97	69.760	Gopherus_agassizii
ENSCSEG00000000131	tfb1m	96	69.501	ENSGGOG00000012189	TFB1M	99	69.501	Gorilla_gorilla
ENSCSEG00000000131	tfb1m	98	81.375	ENSHBUG00000019396	tfb1m	97	81.375	Haplochromis_burtoni
ENSCSEG00000000131	tfb1m	95	69.822	ENSHGLG00000002028	TFB1M	97	69.822	Heterocephalus_glaber_female
ENSCSEG00000000131	tfb1m	95	69.822	ENSHGLG00100001412	TFB1M	97	69.822	Heterocephalus_glaber_male
ENSCSEG00000000131	tfb1m	99	76.218	ENSHCOG00000014135	tfb1m	99	76.218	Hippocampus_comes
ENSCSEG00000000131	tfb1m	95	73.669	ENSIPUG00000010964	tfb1m	99	73.669	Ictalurus_punctatus
ENSCSEG00000000131	tfb1m	95	69.940	ENSSTOG00000026264	TFB1M	97	69.940	Ictidomys_tridecemlineatus
ENSCSEG00000000131	tfb1m	95	69.643	ENSJJAG00000022171	Tfb1m	95	69.643	Jaculus_jaculus
ENSCSEG00000000131	tfb1m	99	78.510	ENSKMAG00000012667	tfb1m	99	78.510	Kryptolebias_marmoratus
ENSCSEG00000000131	tfb1m	99	80.952	ENSLBEG00000011505	tfb1m	100	80.952	Labrus_bergylta
ENSCSEG00000000131	tfb1m	95	73.433	ENSLACG00000012594	TFB1M	95	73.433	Latimeria_chalumnae
ENSCSEG00000000131	tfb1m	94	69.733	ENSLOCG00000016850	tfb1m	99	68.497	Lepisosteus_oculatus
ENSCSEG00000000131	tfb1m	90	58.750	ENSLAFG00000032309	-	99	58.750	Loxodonta_africana
ENSCSEG00000000131	tfb1m	92	70.859	ENSLAFG00000014035	-	97	69.048	Loxodonta_africana
ENSCSEG00000000131	tfb1m	95	70.030	ENSMFAG00000031968	TFB1M	98	70.030	Macaca_fascicularis
ENSCSEG00000000131	tfb1m	95	69.733	ENSMMUG00000011171	TFB1M	98	69.733	Macaca_mulatta
ENSCSEG00000000131	tfb1m	95	70.030	ENSMNEG00000042278	TFB1M	98	70.030	Macaca_nemestrina
ENSCSEG00000000131	tfb1m	95	69.733	ENSMLEG00000000044	TFB1M	98	69.733	Mandrillus_leucophaeus
ENSCSEG00000000131	tfb1m	99	78.223	ENSMAMG00000009423	tfb1m	99	78.223	Mastacembelus_armatus
ENSCSEG00000000131	tfb1m	99	81.429	ENSMZEG00005005640	tfb1m	93	81.429	Maylandia_zebra
ENSCSEG00000000131	tfb1m	75	74.717	ENSMGAG00000012779	TFB1M	100	74.717	Meleagris_gallopavo
ENSCSEG00000000131	tfb1m	95	69.643	ENSMAUG00000006705	Tfb1m	97	69.643	Mesocricetus_auratus
ENSCSEG00000000131	tfb1m	95	69.940	ENSMICG00000045849	TFB1M	97	69.940	Microcebus_murinus
ENSCSEG00000000131	tfb1m	92	70.552	ENSMOCG00000013879	Tfb1m	97	68.750	Microtus_ochrogaster
ENSCSEG00000000131	tfb1m	98	80.460	ENSMMOG00000002203	tfb1m	97	80.460	Mola_mola
ENSCSEG00000000131	tfb1m	92	71.166	ENSMODG00000008169	TFB1M	100	68.314	Monodelphis_domestica
ENSCSEG00000000131	tfb1m	97	79.710	ENSMALG00000011657	tfb1m	92	79.710	Monopterus_albus
ENSCSEG00000000131	tfb1m	95	68.452	MGP_CAROLIEiJ_G0021018	Tfb1m	96	68.452	Mus_caroli
ENSCSEG00000000131	tfb1m	95	68.750	ENSMUSG00000036983	Tfb1m	96	68.750	Mus_musculus
ENSCSEG00000000131	tfb1m	92	70.552	MGP_PahariEiJ_G0023336	Tfb1m	96	69.643	Mus_pahari
ENSCSEG00000000131	tfb1m	95	68.750	MGP_SPRETEiJ_G0021923	Tfb1m	96	68.750	Mus_spretus
ENSCSEG00000000131	tfb1m	95	68.750	ENSMPUG00000002073	TFB1M	97	68.750	Mustela_putorius_furo
ENSCSEG00000000131	tfb1m	96	70.000	ENSMLUG00000011329	TFB1M	98	70.000	Myotis_lucifugus
ENSCSEG00000000131	tfb1m	95	67.857	ENSNGAG00000015154	Tfb1m	94	67.857	Nannospalax_galili
ENSCSEG00000000131	tfb1m	98	81.268	ENSNBRG00000009004	tfb1m	97	81.268	Neolamprologus_brichardi
ENSCSEG00000000131	tfb1m	96	69.208	ENSNLEG00000034352	TFB1M	99	69.208	Nomascus_leucogenys
ENSCSEG00000000131	tfb1m	96	56.805	ENSMEUG00000001699	-	96	56.805	Notamacropus_eugenii
ENSCSEG00000000131	tfb1m	92	52.905	ENSOPRG00000008921	TFB1M	96	52.905	Ochotona_princeps
ENSCSEG00000000131	tfb1m	93	68.389	ENSODEG00000005915	TFB1M	96	68.389	Octodon_degus
ENSCSEG00000000131	tfb1m	95	83.929	ENSONIG00000008109	tfb1m	97	83.929	Oreochromis_niloticus
ENSCSEG00000000131	tfb1m	94	69.578	ENSOCUG00000012154	TFB1M	97	69.578	Oryctolagus_cuniculus
ENSCSEG00000000131	tfb1m	93	84.195	ENSORLG00000017328	tfb1m	80	84.195	Oryzias_latipes
ENSCSEG00000000131	tfb1m	93	84.195	ENSORLG00020002250	tfb1m	96	84.195	Oryzias_latipes_hni
ENSCSEG00000000131	tfb1m	93	84.195	ENSORLG00015016067	tfb1m	96	84.195	Oryzias_latipes_hsok
ENSCSEG00000000131	tfb1m	100	79.320	ENSOMEG00000015641	tfb1m	100	80.170	Oryzias_melastigma
ENSCSEG00000000131	tfb1m	93	69.394	ENSOGAG00000011681	TFB1M	96	69.394	Otolemur_garnettii
ENSCSEG00000000131	tfb1m	95	69.388	ENSOARG00000004216	TFB1M	99	69.388	Ovis_aries
ENSCSEG00000000131	tfb1m	96	69.795	ENSPPAG00000030834	TFB1M	99	69.795	Pan_paniscus
ENSCSEG00000000131	tfb1m	95	67.733	ENSPPRG00000013578	TFB1M	100	67.733	Panthera_pardus
ENSCSEG00000000131	tfb1m	96	68.529	ENSPTIG00000003540	TFB1M	98	68.529	Panthera_tigris_altaica
ENSCSEG00000000131	tfb1m	96	69.208	ENSPTRG00000018730	TFB1M	99	69.208	Pan_troglodytes
ENSCSEG00000000131	tfb1m	95	70.030	ENSPANG00000007489	TFB1M	98	70.030	Papio_anubis
ENSCSEG00000000131	tfb1m	92	80.000	ENSPKIG00000021117	tfb1m	93	80.000	Paramormyrops_kingsleyae
ENSCSEG00000000131	tfb1m	95	71.513	ENSPSIG00000006643	TFB1M	99	71.513	Pelodiscus_sinensis
ENSCSEG00000000131	tfb1m	95	80.357	ENSPMGG00000011289	tfb1m	97	80.357	Periophthalmus_magnuspinnatus
ENSCSEG00000000131	tfb1m	99	67.335	ENSPEMG00000010410	Tfb1m	100	67.335	Peromyscus_maniculatus_bairdii
ENSCSEG00000000131	tfb1m	56	63.265	ENSPMAG00000008056	tfb1m	88	63.452	Petromyzon_marinus
ENSCSEG00000000131	tfb1m	96	69.617	ENSPCIG00000001010	TFB1M	94	69.617	Phascolarctos_cinereus
ENSCSEG00000000131	tfb1m	99	78.028	ENSPFOG00000005139	tfb1m	100	78.028	Poecilia_formosa
ENSCSEG00000000131	tfb1m	99	78.754	ENSPLAG00000021410	tfb1m	100	78.754	Poecilia_latipinna
ENSCSEG00000000131	tfb1m	99	79.037	ENSPMEG00000020166	tfb1m	100	79.037	Poecilia_mexicana
ENSCSEG00000000131	tfb1m	99	78.754	ENSPREG00000022392	tfb1m	100	78.754	Poecilia_reticulata
ENSCSEG00000000131	tfb1m	96	67.836	ENSPPYG00000017123	TFB1M	99	67.836	Pongo_abelii
ENSCSEG00000000131	tfb1m	84	55.892	ENSPCAG00000007078	TFB1M	99	55.892	Procavia_capensis
ENSCSEG00000000131	tfb1m	95	71.131	ENSPCOG00000028453	TFB1M	96	71.131	Propithecus_coquereli
ENSCSEG00000000131	tfb1m	96	69.795	ENSPVAG00000015818	TFB1M	99	69.795	Pteropus_vampyrus
ENSCSEG00000000131	tfb1m	98	81.662	ENSPNYG00000007330	tfb1m	97	81.662	Pundamilia_nyererei
ENSCSEG00000000131	tfb1m	95	75.449	ENSPNAG00000007507	tfb1m	95	76.048	Pygocentrus_nattereri
ENSCSEG00000000131	tfb1m	95	68.452	ENSRNOG00000056223	Tfb1m	97	68.452	Rattus_norvegicus
ENSCSEG00000000131	tfb1m	95	70.536	ENSRBIG00000039975	TFB1M	99	70.536	Rhinopithecus_bieti
ENSCSEG00000000131	tfb1m	95	70.238	ENSRROG00000033802	TFB1M	99	70.238	Rhinopithecus_roxellana
ENSCSEG00000000131	tfb1m	95	71.131	ENSSBOG00000008663	TFB1M	97	71.131	Saimiri_boliviensis_boliviensis
ENSCSEG00000000131	tfb1m	93	62.121	ENSSHAG00000013259	TFB1M	95	62.121	Sarcophilus_harrisii
ENSCSEG00000000131	tfb1m	97	72.093	ENSSFOG00015009739	tfb1m	98	72.093	Scleropages_formosus
ENSCSEG00000000131	tfb1m	99	81.586	ENSSMAG00000008229	tfb1m	100	81.586	Scophthalmus_maximus
ENSCSEG00000000131	tfb1m	99	82.913	ENSSDUG00000011871	tfb1m	100	82.913	Seriola_dumerili
ENSCSEG00000000131	tfb1m	99	82.633	ENSSLDG00000023923	tfb1m	100	82.633	Seriola_lalandi_dorsalis
ENSCSEG00000000131	tfb1m	63	75.225	ENSSARG00000003159	TFB1M	100	75.225	Sorex_araneus
ENSCSEG00000000131	tfb1m	96	66.667	ENSSPUG00000015253	TFB1M	98	66.667	Sphenodon_punctatus
ENSCSEG00000000131	tfb1m	99	81.232	ENSSPAG00000019515	tfb1m	100	81.232	Stegastes_partitus
ENSCSEG00000000131	tfb1m	95	69.733	ENSSSCG00000024361	TFB1M	99	69.733	Sus_scrofa
ENSCSEG00000000131	tfb1m	99	65.616	ENSTGUG00000011136	TFB1M	99	65.616	Taeniopygia_guttata
ENSCSEG00000000131	tfb1m	99	80.747	ENSTRUG00000020334	tfb1m	98	81.609	Takifugu_rubripes
ENSCSEG00000000131	tfb1m	62	84.018	ENSTNIG00000016882	tfb1m	97	84.018	Tetraodon_nigroviridis
ENSCSEG00000000131	tfb1m	92	70.031	ENSTBEG00000008769	TFB1M	94	70.031	Tupaia_belangeri
ENSCSEG00000000131	tfb1m	92	70.948	ENSTTRG00000006327	TFB1M	97	70.948	Tursiops_truncatus
ENSCSEG00000000131	tfb1m	96	68.142	ENSUAMG00000017802	TFB1M	97	68.142	Ursus_americanus
ENSCSEG00000000131	tfb1m	96	68.235	ENSUMAG00000013377	TFB1M	89	68.235	Ursus_maritimus
ENSCSEG00000000131	tfb1m	95	69.027	ENSVPAG00000010148	TFB1M	99	69.027	Vicugna_pacos
ENSCSEG00000000131	tfb1m	95	70.238	ENSVVUG00000007643	TFB1M	97	70.238	Vulpes_vulpes
ENSCSEG00000000131	tfb1m	96	71.765	ENSXETG00000007852	tfb1m	98	71.765	Xenopus_tropicalis
ENSCSEG00000000131	tfb1m	99	79.320	ENSXCOG00000013230	tfb1m	100	79.320	Xiphophorus_couchianus
ENSCSEG00000000131	tfb1m	99	79.320	ENSXMAG00000019222	tfb1m	100	79.320	Xiphophorus_maculatus