EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000000230 (Gene tree)
Gene ID: 103386046
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 7787 bases
Position: chr1:23225592-23233378
Accession: 103386046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000000322	DUF382	PF04037.13	9.2e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000000346	-	2364	XM_008320129	ENSCSEP00000000322	787 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000000230's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000230's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000230	sf3b2	78	77.129	ENSG00000087365	SF3B2	99	84.906	Homo_sapiens
ENSCSEG00000000230	sf3b2	78	78.425	ENSAMEG00000017206	SF3B2	74	75.037	Ailuropoda_melanoleuca
ENSCSEG00000000230	sf3b2	100	75.854	ENSACIG00000000624	sf3b2	100	75.087	Amphilophus_citrinellus
ENSCSEG00000000230	sf3b2	100	75.344	ENSAOCG00000009207	sf3b2	86	79.578	Amphiprion_ocellaris
ENSCSEG00000000230	sf3b2	100	75.626	ENSAPEG00000002762	sf3b2	100	74.510	Amphiprion_percula
ENSCSEG00000000230	sf3b2	97	53.890	ENSACAG00000008615	SF3B2	59	70.433	Anolis_carolinensis
ENSCSEG00000000230	sf3b2	78	77.129	ENSANAG00000029120	SF3B2	75	75.150	Aotus_nancymaae
ENSCSEG00000000230	sf3b2	100	75.793	ENSACLG00000014771	sf3b2	88	80.485	Astatotilapia_calliptera
ENSCSEG00000000230	sf3b2	100	69.516	ENSAMXG00000007929	sf3b2	100	69.966	Astyanax_mexicanus
ENSCSEG00000000230	sf3b2	78	77.760	ENSBTAG00000002778	SF3B2	74	75.150	Bos_taurus
ENSCSEG00000000230	sf3b2	69	50.000	WBGene00021004	sftb-2	89	50.276	Caenorhabditis_elegans
ENSCSEG00000000230	sf3b2	78	77.129	ENSCJAG00000001656	SF3B2	75	75.150	Callithrix_jacchus
ENSCSEG00000000230	sf3b2	78	78.549	ENSCAFG00000013033	SF3B2	74	75.150	Canis_familiaris
ENSCSEG00000000230	sf3b2	78	78.549	ENSCAFG00020015382	SF3B2	74	75.150	Canis_lupus_dingo
ENSCSEG00000000230	sf3b2	78	77.760	ENSCHIG00000011211	SF3B2	74	75.150	Capra_hircus
ENSCSEG00000000230	sf3b2	78	77.129	ENSTSYG00000000959	SF3B2	75	75.150	Carlito_syrichta
ENSCSEG00000000230	sf3b2	53	58.605	ENSCAPG00000006065	SF3B2	67	82.096	Cavia_aperea
ENSCSEG00000000230	sf3b2	67	77.656	ENSCPOG00000008294	SF3B2	72	73.621	Cavia_porcellus
ENSCSEG00000000230	sf3b2	78	77.129	ENSCCAG00000035256	SF3B2	75	75.150	Cebus_capucinus
ENSCSEG00000000230	sf3b2	78	77.129	ENSCATG00000042240	SF3B2	83	70.259	Cercocebus_atys
ENSCSEG00000000230	sf3b2	78	78.549	ENSCLAG00000016852	SF3B2	75	74.551	Chinchilla_lanigera
ENSCSEG00000000230	sf3b2	78	77.129	ENSCSAG00000008121	SF3B2	74	75.150	Chlorocebus_sabaeus
ENSCSEG00000000230	sf3b2	65	85.276	ENSCHOG00000001476	SF3B2	62	77.665	Choloepus_hoffmanni
ENSCSEG00000000230	sf3b2	80	77.160	ENSCPBG00000022465	SF3B2	95	71.071	Chrysemys_picta_bellii
ENSCSEG00000000230	sf3b2	81	59.907	ENSCING00000005665	-	83	66.730	Ciona_intestinalis
ENSCSEG00000000230	sf3b2	78	60.032	ENSCSAVG00000002029	-	83	66.667	Ciona_savignyi
ENSCSEG00000000230	sf3b2	78	77.129	ENSCANG00000039680	SF3B2	75	75.150	Colobus_angolensis_palliatus
ENSCSEG00000000230	sf3b2	78	77.760	ENSCGRG00001015741	Sf3b2	75	75.000	Cricetulus_griseus_chok1gshd
ENSCSEG00000000230	sf3b2	78	77.760	ENSCGRG00000018110	Sf3b2	78	75.000	Cricetulus_griseus_crigri
ENSCSEG00000000230	sf3b2	88	82.763	ENSCVAG00000003357	sf3b2	87	81.830	Cyprinodon_variegatus
ENSCSEG00000000230	sf3b2	97	71.256	ENSDARG00000018049	sf3b2	87	76.171	Danio_rerio
ENSCSEG00000000230	sf3b2	78	78.864	ENSDNOG00000009484	SF3B2	83	74.401	Dasypus_novemcinctus
ENSCSEG00000000230	sf3b2	78	77.358	ENSDORG00000002495	Sf3b2	75	75.149	Dipodomys_ordii
ENSCSEG00000000230	sf3b2	64	78.851	ENSETEG00000020284	SF3B2	57	77.907	Echinops_telfairi
ENSCSEG00000000230	sf3b2	78	65.046	ENSEBUG00000013703	sf3b2	58	77.111	Eptatretus_burgeri
ENSCSEG00000000230	sf3b2	78	78.707	ENSEASG00005004508	SF3B2	74	75.000	Equus_asinus_asinus
ENSCSEG00000000230	sf3b2	78	78.707	ENSECAG00000024461	SF3B2	74	75.000	Equus_caballus
ENSCSEG00000000230	sf3b2	100	78.099	ENSELUG00000005586	sf3b2	90	75.732	Esox_lucius
ENSCSEG00000000230	sf3b2	78	78.549	ENSFCAG00000013289	SF3B2	75	75.150	Felis_catus
ENSCSEG00000000230	sf3b2	81	68.217	ENSFALG00000014653	SF3B2	89	68.160	Ficedula_albicollis
ENSCSEG00000000230	sf3b2	78	78.145	ENSFDAG00000019806	SF3B2	75	74.776	Fukomys_damarensis
ENSCSEG00000000230	sf3b2	88	80.379	ENSFHEG00000020968	sf3b2	87	80.027	Fundulus_heteroclitus
ENSCSEG00000000230	sf3b2	82	83.689	ENSGMOG00000012131	sf3b2	100	84.756	Gadus_morhua
ENSCSEG00000000230	sf3b2	100	74.943	ENSGAFG00000001675	sf3b2	87	80.186	Gambusia_affinis
ENSCSEG00000000230	sf3b2	82	85.736	ENSGACG00000019012	sf3b2	100	85.736	Gasterosteus_aculeatus
ENSCSEG00000000230	sf3b2	78	78.889	ENSGAGG00000023916	SF3B2	88	68.734	Gopherus_agassizii
ENSCSEG00000000230	sf3b2	78	77.129	ENSGGOG00000028448	SF3B2	71	85.112	Gorilla_gorilla
ENSCSEG00000000230	sf3b2	100	75.793	ENSHBUG00000017349	sf3b2	88	80.485	Haplochromis_burtoni
ENSCSEG00000000230	sf3b2	78	78.549	ENSHGLG00000010807	SF3B2	75	74.551	Heterocephalus_glaber_female
ENSCSEG00000000230	sf3b2	78	78.549	ENSHGLG00100006361	SF3B2	75	74.551	Heterocephalus_glaber_male
ENSCSEG00000000230	sf3b2	100	74.501	ENSHCOG00000016203	sf3b2	100	73.113	Hippocampus_comes
ENSCSEG00000000230	sf3b2	100	66.667	ENSIPUG00000009383	sf3b2	87	72.549	Ictalurus_punctatus
ENSCSEG00000000230	sf3b2	78	77.129	ENSSTOG00000028892	SF3B2	75	75.000	Ictidomys_tridecemlineatus
ENSCSEG00000000230	sf3b2	78	77.603	ENSJJAG00000018193	Sf3b2	75	75.150	Jaculus_jaculus
ENSCSEG00000000230	sf3b2	67	91.887	ENSKMAG00000020181	sf3b2	87	78.324	Kryptolebias_marmoratus
ENSCSEG00000000230	sf3b2	100	75.638	ENSLBEG00000027739	sf3b2	92	79.868	Labrus_bergylta
ENSCSEG00000000230	sf3b2	78	79.338	ENSLACG00000010429	SF3B2	74	74.516	Latimeria_chalumnae
ENSCSEG00000000230	sf3b2	78	77.129	ENSLAFG00000002128	SF3B2	75	75.150	Loxodonta_africana
ENSCSEG00000000230	sf3b2	78	77.008	ENSMFAG00000003064	SF3B2	83	70.163	Macaca_fascicularis
ENSCSEG00000000230	sf3b2	78	72.555	ENSMMUG00000011743	SF3B2	82	66.483	Macaca_mulatta
ENSCSEG00000000230	sf3b2	78	77.129	ENSMNEG00000034437	SF3B2	76	75.150	Macaca_nemestrina
ENSCSEG00000000230	sf3b2	78	77.129	ENSMLEG00000029373	SF3B2	76	75.150	Mandrillus_leucophaeus
ENSCSEG00000000230	sf3b2	89	79.706	ENSMZEG00005020789	sf3b2	86	80.485	Maylandia_zebra
ENSCSEG00000000230	sf3b2	81	76.816	ENSMICG00000016942	-	76	75.231	Microcebus_murinus
ENSCSEG00000000230	sf3b2	78	76.972	ENSMICG00000008565	-	75	75.150	Microcebus_murinus
ENSCSEG00000000230	sf3b2	78	77.287	ENSMOCG00000003136	Sf3b2	75	75.150	Microtus_ochrogaster
ENSCSEG00000000230	sf3b2	100	75.087	ENSMMOG00000012928	sf3b2	100	72.885	Mola_mola
ENSCSEG00000000230	sf3b2	78	74.842	ENSMODG00000025020	-	99	73.259	Monodelphis_domestica
ENSCSEG00000000230	sf3b2	78	78.549	MGP_CAROLIEiJ_G0022539	Sf3b2	75	74.551	Mus_caroli
ENSCSEG00000000230	sf3b2	78	77.603	ENSMUSG00000024853	Sf3b2	75	75.150	Mus_musculus
ENSCSEG00000000230	sf3b2	78	77.287	MGP_PahariEiJ_G0014036	Sf3b2	75	74.850	Mus_pahari
ENSCSEG00000000230	sf3b2	78	77.603	MGP_SPRETEiJ_G0023453	Sf3b2	74	75.610	Mus_spretus
ENSCSEG00000000230	sf3b2	78	77.603	ENSMPUG00000011349	SF3B2	74	75.150	Mustela_putorius_furo
ENSCSEG00000000230	sf3b2	78	78.707	ENSMLUG00000011136	SF3B2	74	74.850	Myotis_lucifugus
ENSCSEG00000000230	sf3b2	78	77.129	ENSNGAG00000012103	Sf3b2	82	70.289	Nannospalax_galili
ENSCSEG00000000230	sf3b2	78	74.028	ENSNLEG00000006007	SF3B2	59	81.887	Nomascus_leucogenys
ENSCSEG00000000230	sf3b2	69	80.845	ENSMEUG00000000019	SF3B2	66	80.000	Notamacropus_eugenii
ENSCSEG00000000230	sf3b2	78	73.975	ENSODEG00000017764	SF3B2	75	70.509	Octodon_degus
ENSCSEG00000000230	sf3b2	78	71.944	ENSOANG00000012482	SF3B2	89	79.528	Ornithorhynchus_anatinus
ENSCSEG00000000230	sf3b2	53	54.524	ENSOCUG00000024154	-	82	53.636	Oryctolagus_cuniculus
ENSCSEG00000000230	sf3b2	78	78.549	ENSOCUG00000015722	-	98	63.164	Oryctolagus_cuniculus
ENSCSEG00000000230	sf3b2	100	75.350	ENSORLG00000008235	sf3b2	85	78.121	Oryzias_latipes
ENSCSEG00000000230	sf3b2	100	75.350	ENSORLG00020005357	sf3b2	88	78.121	Oryzias_latipes_hni
ENSCSEG00000000230	sf3b2	100	75.350	ENSORLG00015022454	sf3b2	91	76.967	Oryzias_latipes_hsok
ENSCSEG00000000230	sf3b2	100	76.095	ENSOMEG00000017480	sf3b2	89	77.718	Oryzias_melastigma
ENSCSEG00000000230	sf3b2	71	81.317	ENSOGAG00000005799	SF3B2	59	83.774	Otolemur_garnettii
ENSCSEG00000000230	sf3b2	78	77.760	ENSOARG00000002125	SF3B2	90	75.037	Ovis_aries
ENSCSEG00000000230	sf3b2	78	77.129	ENSPPAG00000007359	SF3B2	81	71.031	Pan_paniscus
ENSCSEG00000000230	sf3b2	78	78.549	ENSPPRG00000013334	SF3B2	75	75.150	Panthera_pardus
ENSCSEG00000000230	sf3b2	78	78.549	ENSPTIG00000015022	SF3B2	75	75.150	Panthera_tigris_altaica
ENSCSEG00000000230	sf3b2	78	77.129	ENSPTRG00000003912	SF3B2	81	71.031	Pan_troglodytes
ENSCSEG00000000230	sf3b2	78	77.129	ENSPANG00000008593	SF3B2	83	70.259	Papio_anubis
ENSCSEG00000000230	sf3b2	100	71.171	ENSPKIG00000016576	sf3b2	95	78.977	Paramormyrops_kingsleyae
ENSCSEG00000000230	sf3b2	78	79.745	ENSPSIG00000003158	SF3B2	99	69.404	Pelodiscus_sinensis
ENSCSEG00000000230	sf3b2	78	77.287	ENSPEMG00000015437	Sf3b2	75	74.701	Peromyscus_maniculatus_bairdii
ENSCSEG00000000230	sf3b2	81	71.562	ENSPEMG00000015451	-	80	70.781	Peromyscus_maniculatus_bairdii
ENSCSEG00000000230	sf3b2	100	77.816	ENSPFOG00000002552	sf3b2	87	80.559	Poecilia_formosa
ENSCSEG00000000230	sf3b2	100	77.584	ENSPLAG00000001471	sf3b2	87	80.426	Poecilia_latipinna
ENSCSEG00000000230	sf3b2	100	77.791	ENSPMEG00000013180	sf3b2	87	80.533	Poecilia_mexicana
ENSCSEG00000000230	sf3b2	88	81.114	ENSPREG00000002665	sf3b2	87	81.016	Poecilia_reticulata
ENSCSEG00000000230	sf3b2	78	76.972	ENSPCAG00000005129	SF3B2	74	74.551	Procavia_capensis
ENSCSEG00000000230	sf3b2	78	76.972	ENSPCOG00000025375	SF3B2	75	75.000	Propithecus_coquereli
ENSCSEG00000000230	sf3b2	100	75.186	ENSPNYG00000023594	sf3b2	98	81.439	Pundamilia_nyererei
ENSCSEG00000000230	sf3b2	100	67.829	ENSPNAG00000001891	sf3b2	100	69.369	Pygocentrus_nattereri
ENSCSEG00000000230	sf3b2	78	77.129	ENSRNOG00000020412	Sf3b2	75	75.000	Rattus_norvegicus
ENSCSEG00000000230	sf3b2	78	78.549	ENSRBIG00000034065	SF3B2	75	75.150	Rhinopithecus_bieti
ENSCSEG00000000230	sf3b2	78	78.549	ENSRROG00000034496	SF3B2	75	75.150	Rhinopithecus_roxellana
ENSCSEG00000000230	sf3b2	78	77.129	ENSSBOG00000026337	SF3B2	75	75.037	Saimiri_boliviensis_boliviensis
ENSCSEG00000000230	sf3b2	78	65.625	ENSSHAG00000018043	-	79	65.460	Sarcophilus_harrisii
ENSCSEG00000000230	sf3b2	78	75.197	ENSSHAG00000010933	-	72	73.222	Sarcophilus_harrisii
ENSCSEG00000000230	sf3b2	100	68.799	ENSSFOG00015021125	sf3b2	81	84.242	Scleropages_formosus
ENSCSEG00000000230	sf3b2	100	76.457	ENSSMAG00000004079	sf3b2	89	79.447	Scophthalmus_maximus
ENSCSEG00000000230	sf3b2	66	94.264	ENSSLDG00000006838	sf3b2	87	81.142	Seriola_lalandi_dorsalis
ENSCSEG00000000230	sf3b2	78	80.763	ENSSPUG00000009198	SF3B2	82	74.095	Sphenodon_punctatus
ENSCSEG00000000230	sf3b2	100	73.631	ENSSPAG00000004406	sf3b2	59	93.714	Stegastes_partitus
ENSCSEG00000000230	sf3b2	78	78.707	ENSSSCG00000012957	SF3B2	74	75.299	Sus_scrofa
ENSCSEG00000000230	sf3b2	100	65.130	ENSTRUG00000007611	sf3b2	95	71.977	Takifugu_rubripes
ENSCSEG00000000230	sf3b2	88	76.604	ENSTNIG00000007441	sf3b2	88	76.334	Tetraodon_nigroviridis
ENSCSEG00000000230	sf3b2	71	83.803	ENSTBEG00000004258	SF3B2	67	83.803	Tupaia_belangeri
ENSCSEG00000000230	sf3b2	78	77.445	ENSTTRG00000014339	SF3B2	86	67.010	Tursiops_truncatus
ENSCSEG00000000230	sf3b2	75	77.250	ENSUAMG00000020754	SF3B2	70	74.062	Ursus_americanus
ENSCSEG00000000230	sf3b2	78	78.549	ENSUMAG00000010994	SF3B2	74	75.150	Ursus_maritimus
ENSCSEG00000000230	sf3b2	78	78.549	ENSVVUG00000027029	SF3B2	74	75.150	Vulpes_vulpes
ENSCSEG00000000230	sf3b2	81	75.155	ENSXETG00000008422	sf3b2	82	74.689	Xenopus_tropicalis
ENSCSEG00000000230	sf3b2	91	78.022	ENSXCOG00000008943	sf3b2	96	76.087	Xiphophorus_couchianus
ENSCSEG00000000230	sf3b2	100	77.021	ENSXMAG00000008467	sf3b2	87	79.497	Xiphophorus_maculatus