EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000000299 (Gene tree)
Gene ID: 103378613
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 15255 bases
Position: chr5:439420-454674
Accession: 103378613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000000409	Urb2	PF10441.9	6.8e-18	1	1
ENSCSEP00000000406	Urb2	PF10441.9	6.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000000434	-	4895	-	ENSCSEP00000000409	1556 (aa)	-	-
ENSCSET00000000431	-	5614	XM_008309884	ENSCSEP00000000406	1604 (aa)	XP_008308106	UPI000497CBD3

Gene Model

Click here to download ENSCSEG00000000299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000299	urb2	99	32.914	ENSG00000135763	URB2	99	55.814	Homo_sapiens
ENSCSEG00000000299	urb2	91	54.675	ENSAPOG00000000608	urb2	100	54.675	Acanthochromis_polyacanthus
ENSCSEG00000000299	urb2	100	33.014	ENSAMEG00000009206	URB2	100	33.035	Ailuropoda_melanoleuca
ENSCSEG00000000299	urb2	100	56.728	ENSAOCG00000019961	urb2	100	56.846	Amphiprion_ocellaris
ENSCSEG00000000299	urb2	100	56.609	ENSAPEG00000005263	urb2	100	56.728	Amphiprion_percula
ENSCSEG00000000299	urb2	100	56.958	ENSATEG00000020930	urb2	100	57.017	Anabas_testudineus
ENSCSEG00000000299	urb2	97	33.496	ENSAPLG00000002998	URB2	99	33.272	Anas_platyrhynchos
ENSCSEG00000000299	urb2	99	38.641	ENSACAG00000001285	URB2	96	38.641	Anolis_carolinensis
ENSCSEG00000000299	urb2	99	33.294	ENSANAG00000033963	URB2	99	33.294	Aotus_nancymaae
ENSCSEG00000000299	urb2	91	52.202	ENSACLG00000009254	urb2	100	52.041	Astatotilapia_calliptera
ENSCSEG00000000299	urb2	99	38.540	ENSAMXG00000003474	urb2	99	38.345	Astyanax_mexicanus
ENSCSEG00000000299	urb2	100	33.014	ENSBTAG00000010180	URB2	100	33.094	Bos_taurus
ENSCSEG00000000299	urb2	96	56.643	ENSCJAG00000010968	URB2	99	56.643	Callithrix_jacchus
ENSCSEG00000000299	urb2	99	32.675	ENSCAFG00000012118	URB2	99	32.835	Canis_familiaris
ENSCSEG00000000299	urb2	80	50.455	ENSCAFG00020027217	URB2	83	50.455	Canis_lupus_dingo
ENSCSEG00000000299	urb2	100	33.134	ENSCHIG00000014513	URB2	100	33.074	Capra_hircus
ENSCSEG00000000299	urb2	100	32.695	ENSTSYG00000006924	URB2	100	32.656	Carlito_syrichta
ENSCSEG00000000299	urb2	63	40.489	ENSCPOG00000020777	-	99	40.489	Cavia_porcellus
ENSCSEG00000000299	urb2	99	33.492	ENSCCAG00000023932	URB2	99	33.492	Cebus_capucinus
ENSCSEG00000000299	urb2	99	32.894	ENSCATG00000043366	URB2	99	32.914	Cercocebus_atys
ENSCSEG00000000299	urb2	99	33.713	ENSCLAG00000006268	URB2	99	34.098	Chinchilla_lanigera
ENSCSEG00000000299	urb2	93	40.060	ENSCSAG00000010599	URB2	99	32.675	Chlorocebus_sabaeus
ENSCSEG00000000299	urb2	68	50.450	ENSCHOG00000010163	URB2	64	50.450	Choloepus_hoffmanni
ENSCSEG00000000299	urb2	99	35.493	ENSCPBG00000006191	URB2	99	35.375	Chrysemys_picta_bellii
ENSCSEG00000000299	urb2	92	44.262	ENSCANG00000023711	URB2	88	44.262	Colobus_angolensis_palliatus
ENSCSEG00000000299	urb2	99	33.455	ENSCGRG00001009591	Urb2	99	33.939	Cricetulus_griseus_chok1gshd
ENSCSEG00000000299	urb2	99	33.455	ENSCGRG00000011259	Urb2	99	33.939	Cricetulus_griseus_crigri
ENSCSEG00000000299	urb2	100	52.392	ENSCVAG00000011011	urb2	100	52.453	Cyprinodon_variegatus
ENSCSEG00000000299	urb2	100	39.976	ENSDARG00000003217	urb2	100	58.667	Danio_rerio
ENSCSEG00000000299	urb2	97	30.606	ENSDNOG00000043064	URB2	99	30.989	Dasypus_novemcinctus
ENSCSEG00000000299	urb2	99	32.434	ENSDORG00000014975	Urb2	99	32.314	Dipodomys_ordii
ENSCSEG00000000299	urb2	95	37.324	ENSETEG00000002869	URB2	95	37.324	Echinops_telfairi
ENSCSEG00000000299	urb2	100	34.135	ENSEASG00005012060	URB2	100	34.354	Equus_asinus_asinus
ENSCSEG00000000299	urb2	94	57.241	ENSECAG00000012338	URB2	100	57.241	Equus_caballus
ENSCSEG00000000299	urb2	92	54.545	ENSEEUG00000002669	URB2	91	54.545	Erinaceus_europaeus
ENSCSEG00000000299	urb2	100	44.126	ENSELUG00000014647	urb2	100	44.126	Esox_lucius
ENSCSEG00000000299	urb2	99	32.854	ENSFCAG00000007662	URB2	99	32.974	Felis_catus
ENSCSEG00000000299	urb2	93	45.231	ENSFALG00000003385	URB2	90	45.231	Ficedula_albicollis
ENSCSEG00000000299	urb2	99	33.977	ENSFDAG00000021079	URB2	99	33.977	Fukomys_damarensis
ENSCSEG00000000299	urb2	100	53.248	ENSFHEG00000010357	urb2	100	53.248	Fundulus_heteroclitus
ENSCSEG00000000299	urb2	99	47.602	ENSGMOG00000012459	urb2	100	46.995	Gadus_morhua
ENSCSEG00000000299	urb2	99	34.695	ENSGALG00000011101	URB2	99	34.517	Gallus_gallus
ENSCSEG00000000299	urb2	100	53.410	ENSGACG00000016179	urb2	100	53.353	Gasterosteus_aculeatus
ENSCSEG00000000299	urb2	99	35.824	ENSGAGG00000021879	URB2	99	35.587	Gopherus_agassizii
ENSCSEG00000000299	urb2	99	33.174	ENSGGOG00000025643	URB2	99	33.194	Gorilla_gorilla
ENSCSEG00000000299	urb2	100	54.083	ENSHBUG00000018469	urb2	100	54.083	Haplochromis_burtoni
ENSCSEG00000000299	urb2	97	33.024	ENSHGLG00000016561	URB2	99	33.024	Heterocephalus_glaber_female
ENSCSEG00000000299	urb2	94	34.639	ENSHGLG00100001838	URB2	99	33.093	Heterocephalus_glaber_male
ENSCSEG00000000299	urb2	100	38.805	ENSIPUG00000020315	urb2	100	38.842	Ictalurus_punctatus
ENSCSEG00000000299	urb2	99	33.414	ENSSTOG00000025323	URB2	99	33.353	Ictidomys_tridecemlineatus
ENSCSEG00000000299	urb2	99	33.112	ENSJJAG00000011998	Urb2	99	33.032	Jaculus_jaculus
ENSCSEG00000000299	urb2	100	53.118	ENSKMAG00000020129	urb2	100	53.118	Kryptolebias_marmoratus
ENSCSEG00000000299	urb2	99	36.045	ENSLACG00000002038	URB2	99	35.867	Latimeria_chalumnae
ENSCSEG00000000299	urb2	99	40.659	ENSLOCG00000015462	urb2	99	40.575	Lepisosteus_oculatus
ENSCSEG00000000299	urb2	99	33.373	ENSLAFG00000012484	URB2	100	33.594	Loxodonta_africana
ENSCSEG00000000299	urb2	99	32.894	ENSMFAG00000039905	URB2	99	32.914	Macaca_fascicularis
ENSCSEG00000000299	urb2	99	32.894	ENSMMUG00000009509	URB2	99	32.914	Macaca_mulatta
ENSCSEG00000000299	urb2	95	39.385	ENSMNEG00000038762	URB2	97	40.541	Macaca_nemestrina
ENSCSEG00000000299	urb2	99	32.894	ENSMLEG00000043252	URB2	99	32.914	Mandrillus_leucophaeus
ENSCSEG00000000299	urb2	100	55.437	ENSMAMG00000020365	urb2	100	55.556	Mastacembelus_armatus
ENSCSEG00000000299	urb2	100	53.905	ENSMZEG00005011027	urb2	100	53.905	Maylandia_zebra
ENSCSEG00000000299	urb2	95	32.058	ENSMGAG00000012073	URB2	99	31.938	Meleagris_gallopavo
ENSCSEG00000000299	urb2	96	57.343	ENSMAUG00000017980	Urb2	99	57.343	Mesocricetus_auratus
ENSCSEG00000000299	urb2	93	42.042	ENSMICG00000033302	URB2	100	33.194	Microcebus_murinus
ENSCSEG00000000299	urb2	99	33.633	ENSMOCG00000020369	Urb2	99	33.694	Microtus_ochrogaster
ENSCSEG00000000299	urb2	100	57.685	ENSMALG00000006529	urb2	100	57.685	Monopterus_albus
ENSCSEG00000000299	urb2	99	33.313	ENSMUSG00000031976	Urb2	99	33.514	Mus_musculus
ENSCSEG00000000299	urb2	99	33.253	ENSMPUG00000012438	URB2	99	33.673	Mustela_putorius_furo
ENSCSEG00000000299	urb2	99	33.152	ENSNGAG00000016524	Urb2	99	33.333	Nannospalax_galili
ENSCSEG00000000299	urb2	99	32.933	ENSNLEG00000014450	URB2	99	32.954	Nomascus_leucogenys
ENSCSEG00000000299	urb2	91	41.892	ENSMEUG00000016434	URB2	92	41.892	Notamacropus_eugenii
ENSCSEG00000000299	urb2	90	80.952	ENSOPRG00000009906	URB2	88	80.952	Ochotona_princeps
ENSCSEG00000000299	urb2	99	33.918	ENSODEG00000005593	URB2	99	33.978	Octodon_degus
ENSCSEG00000000299	urb2	100	52.941	ENSONIG00000017078	urb2	100	53.273	Oreochromis_niloticus
ENSCSEG00000000299	urb2	100	32.515	ENSOANG00000013732	URB2	100	32.147	Ornithorhynchus_anatinus
ENSCSEG00000000299	urb2	100	33.094	ENSOCUG00000010700	URB2	100	33.174	Oryctolagus_cuniculus
ENSCSEG00000000299	urb2	100	52.764	ENSORLG00000010915	urb2	100	52.825	Oryzias_latipes
ENSCSEG00000000299	urb2	100	52.584	ENSORLG00020003361	urb2	100	52.764	Oryzias_latipes_hni
ENSCSEG00000000299	urb2	100	53.065	ENSORLG00015001534	urb2	100	52.945	Oryzias_latipes_hsok
ENSCSEG00000000299	urb2	100	53.366	ENSOMEG00000010076	urb2	100	53.366	Oryzias_melastigma
ENSCSEG00000000299	urb2	100	32.853	ENSOGAG00000003021	URB2	100	33.113	Otolemur_garnettii
ENSCSEG00000000299	urb2	100	32.835	ENSOARG00000003102	URB2	100	32.995	Ovis_aries
ENSCSEG00000000299	urb2	99	33.174	ENSPPAG00000040629	URB2	99	33.194	Pan_paniscus
ENSCSEG00000000299	urb2	99	32.855	ENSPPRG00000012767	URB2	99	32.835	Panthera_pardus
ENSCSEG00000000299	urb2	99	35.374	ENSPTIG00000012577	URB2	99	35.374	Panthera_tigris_altaica
ENSCSEG00000000299	urb2	99	33.234	ENSPTRG00000002092	URB2	99	33.254	Pan_troglodytes
ENSCSEG00000000299	urb2	95	40.000	ENSPANG00000002245	URB2	97	41.216	Papio_anubis
ENSCSEG00000000299	urb2	99	40.765	ENSPKIG00000005787	urb2	99	40.800	Paramormyrops_kingsleyae
ENSCSEG00000000299	urb2	99	35.329	ENSPSIG00000002690	URB2	99	35.270	Pelodiscus_sinensis
ENSCSEG00000000299	urb2	96	32.602	ENSPEMG00000019551	Urb2	100	32.625	Peromyscus_maniculatus_bairdii
ENSCSEG00000000299	urb2	99	33.030	ENSPCIG00000030071	URB2	99	33.374	Phascolarctos_cinereus
ENSCSEG00000000299	urb2	100	52.471	ENSPFOG00000014330	urb2	100	52.471	Poecilia_formosa
ENSCSEG00000000299	urb2	100	52.683	ENSPLAG00000014654	urb2	100	52.532	Poecilia_latipinna
ENSCSEG00000000299	urb2	100	52.898	ENSPMEG00000012356	urb2	100	52.898	Poecilia_mexicana
ENSCSEG00000000299	urb2	100	52.256	ENSPREG00000010268	urb2	100	52.256	Poecilia_reticulata
ENSCSEG00000000299	urb2	100	32.594	ENSPPYG00000000123	URB2	100	32.675	Pongo_abelii
ENSCSEG00000000299	urb2	100	32.749	ENSPCOG00000023537	URB2	100	33.053	Propithecus_coquereli
ENSCSEG00000000299	urb2	100	31.509	ENSPVAG00000002108	URB2	100	31.471	Pteropus_vampyrus
ENSCSEG00000000299	urb2	91	52.171	ENSPNYG00000016840	urb2	100	52.171	Pundamilia_nyererei
ENSCSEG00000000299	urb2	99	40.146	ENSPNAG00000013684	urb2	99	40.085	Pygocentrus_nattereri
ENSCSEG00000000299	urb2	99	33.673	ENSRNOG00000026853	Urb2	97	33.692	Rattus_norvegicus
ENSCSEG00000000299	urb2	92	43.934	ENSRBIG00000037937	URB2	99	33.054	Rhinopithecus_bieti
ENSCSEG00000000299	urb2	92	44.262	ENSRROG00000039854	URB2	88	44.262	Rhinopithecus_roxellana
ENSCSEG00000000299	urb2	99	33.074	ENSSBOG00000023055	URB2	99	33.074	Saimiri_boliviensis_boliviensis
ENSCSEG00000000299	urb2	91	46.865	ENSSHAG00000014735	URB2	88	46.865	Sarcophilus_harrisii
ENSCSEG00000000299	urb2	97	40.319	ENSSFOG00015015432	urb2	98	40.245	Scleropages_formosus
ENSCSEG00000000299	urb2	91	58.014	ENSSMAG00000004984	urb2	100	58.014	Scophthalmus_maximus
ENSCSEG00000000299	urb2	100	60.070	ENSSDUG00000000902	urb2	100	60.364	Seriola_dumerili
ENSCSEG00000000299	urb2	99	34.020	ENSSPUG00000018549	URB2	99	34.726	Sphenodon_punctatus
ENSCSEG00000000299	urb2	100	56.846	ENSSPAG00000013632	urb2	100	56.991	Stegastes_partitus
ENSCSEG00000000299	urb2	100	33.433	ENSSSCG00000010186	URB2	100	33.313	Sus_scrofa
ENSCSEG00000000299	urb2	93	44.923	ENSTGUG00000009990	URB2	90	44.923	Taeniopygia_guttata
ENSCSEG00000000299	urb2	100	49.111	ENSTRUG00000008173	urb2	100	49.554	Takifugu_rubripes
ENSCSEG00000000299	urb2	94	55.731	ENSTNIG00000017689	urb2	100	48.675	Tetraodon_nigroviridis
ENSCSEG00000000299	urb2	95	76.190	ENSTTRG00000014864	URB2	95	76.190	Tursiops_truncatus
ENSCSEG00000000299	urb2	100	33.254	ENSUAMG00000015022	URB2	100	33.274	Ursus_americanus
ENSCSEG00000000299	urb2	100	33.333	ENSUMAG00000004728	URB2	100	33.353	Ursus_maritimus
ENSCSEG00000000299	urb2	56	56.250	ENSVPAG00000001750	-	51	56.250	Vicugna_pacos
ENSCSEG00000000299	urb2	99	32.615	ENSVVUG00000006747	URB2	99	32.656	Vulpes_vulpes
ENSCSEG00000000299	urb2	99	31.100	ENSXETG00000023331	urb2	99	30.838	Xenopus_tropicalis
ENSCSEG00000000299	urb2	100	52.526	ENSXMAG00000015059	urb2	100	52.526	Xiphophorus_maculatus