EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000000402 (Gene tree)
Gene ID: 103382382
Gene Symbol: RNPS1 (1 of many)
Alias: -
Full Name: RNA-binding protein with serine-rich domain 1-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 4596 bases
Position: chr8:12791705-12796300
Accession: 103382382
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000000576	RRM_1	PF00076.22	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000000604	RNPS1 (1 of many)-201	903	XM_008315175	ENSCSEP00000000576	300 (aa)	XP_008313398	-

Gene Model

Click here to download ENSCSEG00000000402's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG
csem03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000000402	RNPS1	76	74.249	ENSCSEG00000015997	RNPS1	81	63.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000402	RNPS1	85	68.702	ENSG00000205937	RNPS1	91	68.702	Homo_sapiens
ENSCSEG00000000402	RNPS1	76	92.511	ENSAPOG00000014649	-	83	92.511	Acanthochromis_polyacanthus
ENSCSEG00000000402	RNPS1	76	76.190	ENSAPOG00000017310	RNPS1	74	68.831	Acanthochromis_polyacanthus
ENSCSEG00000000402	RNPS1	85	68.702	ENSAMEG00000017861	RNPS1	85	68.702	Ailuropoda_melanoleuca
ENSCSEG00000000402	RNPS1	69	67.143	ENSACIG00000014367	-	76	77.143	Amphilophus_citrinellus
ENSCSEG00000000402	RNPS1	76	74.569	ENSAOCG00000002404	RNPS1	82	66.379	Amphiprion_ocellaris
ENSCSEG00000000402	RNPS1	76	92.576	ENSAPEG00000019263	-	79	92.576	Amphiprion_percula
ENSCSEG00000000402	RNPS1	76	74.678	ENSAPEG00000006497	RNPS1	80	66.524	Amphiprion_percula
ENSCSEG00000000402	RNPS1	76	77.586	ENSATEG00000024267	RNPS1	82	68.103	Anabas_testudineus
ENSCSEG00000000402	RNPS1	85	52.471	ENSAPLG00000006231	RNPS1	58	81.651	Anas_platyrhynchos
ENSCSEG00000000402	RNPS1	75	62.069	ENSACAG00000004088	RNPS1	93	63.362	Anolis_carolinensis
ENSCSEG00000000402	RNPS1	72	66.518	ENSANAG00000029802	-	88	66.812	Aotus_nancymaae
ENSCSEG00000000402	RNPS1	85	68.321	ENSANAG00000028802	RNPS1	85	70.833	Aotus_nancymaae
ENSCSEG00000000402	RNPS1	76	78.261	ENSACLG00000021537	-	87	86.522	Astatotilapia_calliptera
ENSCSEG00000000402	RNPS1	76	70.996	ENSACLG00000025942	RNPS1	82	70.000	Astatotilapia_calliptera
ENSCSEG00000000402	RNPS1	76	78.261	ENSAMXG00000006330	-	82	75.983	Astyanax_mexicanus
ENSCSEG00000000402	RNPS1	77	67.364	ENSBTAG00000009969	RNPS1	77	70.183	Bos_taurus
ENSCSEG00000000402	RNPS1	85	68.702	ENSCJAG00000014969	RNPS1	98	64.557	Callithrix_jacchus
ENSCSEG00000000402	RNPS1	85	68.702	ENSCAFG00000019397	RNPS1	85	68.702	Canis_familiaris
ENSCSEG00000000402	RNPS1	85	68.702	ENSCAFG00020026159	RNPS1	95	66.071	Canis_lupus_dingo
ENSCSEG00000000402	RNPS1	65	67.157	ENSCHIG00000014621	-	69	68.293	Capra_hircus
ENSCSEG00000000402	RNPS1	85	68.702	ENSTSYG00000001629	RNPS1	85	71.250	Carlito_syrichta
ENSCSEG00000000402	RNPS1	75	66.094	ENSTSYG00000031848	-	95	65.236	Carlito_syrichta
ENSCSEG00000000402	RNPS1	85	68.321	ENSCAPG00000007731	RNPS1	85	68.321	Cavia_aperea
ENSCSEG00000000402	RNPS1	85	68.321	ENSCPOG00000002066	RNPS1	85	70.833	Cavia_porcellus
ENSCSEG00000000402	RNPS1	85	68.321	ENSCCAG00000034480	RNPS1	85	70.833	Cebus_capucinus
ENSCSEG00000000402	RNPS1	85	68.702	ENSCATG00000013756	RNPS1	97	64.167	Cercocebus_atys
ENSCSEG00000000402	RNPS1	94	61.856	ENSCATG00000042361	-	86	65.267	Cercocebus_atys
ENSCSEG00000000402	RNPS1	85	68.702	ENSCLAG00000015546	RNPS1	85	71.250	Chinchilla_lanigera
ENSCSEG00000000402	RNPS1	88	71.795	ENSCSAG00000005219	-	80	70.000	Chlorocebus_sabaeus
ENSCSEG00000000402	RNPS1	85	69.084	ENSCHOG00000004866	RNPS1	85	69.084	Choloepus_hoffmanni
ENSCSEG00000000402	RNPS1	77	50.862	ENSCPBG00000000214	RNPS1	83	51.282	Chrysemys_picta_bellii
ENSCSEG00000000402	RNPS1	85	68.702	ENSCANG00000041307	RNPS1	95	64.557	Colobus_angolensis_palliatus
ENSCSEG00000000402	RNPS1	85	68.702	ENSCGRG00001020431	Rnps1	85	71.250	Cricetulus_griseus_chok1gshd
ENSCSEG00000000402	RNPS1	77	67.500	ENSCGRG00000014021	Rnps1	77	70.183	Cricetulus_griseus_crigri
ENSCSEG00000000402	RNPS1	71	70.046	ENSCVAG00000010868	RNPS1	76	77.315	Cyprinodon_variegatus
ENSCSEG00000000402	RNPS1	76	65.385	ENSDARG00000100188	RNPS1	82	65.812	Danio_rerio
ENSCSEG00000000402	RNPS1	76	65.385	ENSDARG00000116743	rnps1	82	65.812	Danio_rerio
ENSCSEG00000000402	RNPS1	85	68.702	ENSDNOG00000016081	RNPS1	85	68.702	Dasypus_novemcinctus
ENSCSEG00000000402	RNPS1	85	68.321	ENSDORG00000001755	Rnps1	85	70.833	Dipodomys_ordii
ENSCSEG00000000402	RNPS1	85	68.702	ENSEASG00005004862	RNPS1	85	68.702	Equus_asinus_asinus
ENSCSEG00000000402	RNPS1	75	63.248	ENSECAG00000023288	RNPS1	83	64.530	Equus_caballus
ENSCSEG00000000402	RNPS1	70	75.120	ENSELUG00000015003	RNPS1	77	72.642	Esox_lucius
ENSCSEG00000000402	RNPS1	85	68.321	ENSFCAG00000007690	RNPS1	85	70.833	Felis_catus
ENSCSEG00000000402	RNPS1	78	70.124	ENSFALG00000004868	RNPS1	85	70.124	Ficedula_albicollis
ENSCSEG00000000402	RNPS1	85	68.321	ENSFDAG00000003386	RNPS1	85	70.833	Fukomys_damarensis
ENSCSEG00000000402	RNPS1	71	71.889	ENSFHEG00000011705	RNPS1	77	66.820	Fundulus_heteroclitus
ENSCSEG00000000402	RNPS1	77	70.000	ENSGALG00000009288	RNPS1	84	70.000	Gallus_gallus
ENSCSEG00000000402	RNPS1	71	67.593	ENSGAFG00000005457	RNPS1	76	76.389	Gambusia_affinis
ENSCSEG00000000402	RNPS1	76	81.498	ENSGACG00000005641	-	82	83.700	Gasterosteus_aculeatus
ENSCSEG00000000402	RNPS1	76	67.811	ENSGACG00000011261	RNPS1	82	64.807	Gasterosteus_aculeatus
ENSCSEG00000000402	RNPS1	85	66.794	ENSGAGG00000010452	RNPS1	84	66.794	Gopherus_agassizii
ENSCSEG00000000402	RNPS1	66	68.599	ENSGGOG00000026421	-	79	68.599	Gorilla_gorilla
ENSCSEG00000000402	RNPS1	85	68.702	ENSGGOG00000014275	RNPS1	95	66.079	Gorilla_gorilla
ENSCSEG00000000402	RNPS1	76	70.996	ENSHBUG00000002494	RNPS1	82	70.000	Haplochromis_burtoni
ENSCSEG00000000402	RNPS1	77	77.489	ENSHBUG00000017337	-	83	85.714	Haplochromis_burtoni
ENSCSEG00000000402	RNPS1	78	65.560	ENSHGLG00000006292	-	93	66.527	Heterocephalus_glaber_female
ENSCSEG00000000402	RNPS1	85	68.702	ENSHGLG00000013957	RNPS1	85	71.250	Heterocephalus_glaber_female
ENSCSEG00000000402	RNPS1	85	64.885	ENSHGLG00100001721	-	84	62.835	Heterocephalus_glaber_male
ENSCSEG00000000402	RNPS1	85	68.702	ENSHGLG00100003539	RNPS1	85	71.250	Heterocephalus_glaber_male
ENSCSEG00000000402	RNPS1	77	65.106	ENSJJAG00000019234	-	67	63.136	Jaculus_jaculus
ENSCSEG00000000402	RNPS1	85	68.702	ENSJJAG00000015576	-	85	71.250	Jaculus_jaculus
ENSCSEG00000000402	RNPS1	76	70.130	ENSKMAG00000009135	RNPS1	82	77.922	Kryptolebias_marmoratus
ENSCSEG00000000402	RNPS1	76	68.240	ENSLOCG00000001758	RNPS1	82	70.386	Lepisosteus_oculatus
ENSCSEG00000000402	RNPS1	85	68.702	ENSMFAG00000042142	RNPS1	85	71.250	Macaca_fascicularis
ENSCSEG00000000402	RNPS1	86	64.045	ENSMMUG00000041726	-	91	66.031	Macaca_mulatta
ENSCSEG00000000402	RNPS1	65	68.966	ENSMMUG00000019238	-	79	68.966	Macaca_mulatta
ENSCSEG00000000402	RNPS1	86	64.419	ENSMNEG00000024827	-	83	63.750	Macaca_nemestrina
ENSCSEG00000000402	RNPS1	85	68.702	ENSMLEG00000036928	RNPS1	85	71.250	Mandrillus_leucophaeus
ENSCSEG00000000402	RNPS1	66	67.150	ENSMLEG00000040232	-	80	68.116	Mandrillus_leucophaeus
ENSCSEG00000000402	RNPS1	77	90.909	ENSMAMG00000021148	-	81	87.281	Mastacembelus_armatus
ENSCSEG00000000402	RNPS1	76	75.862	ENSMAMG00000021609	-	82	66.810	Mastacembelus_armatus
ENSCSEG00000000402	RNPS1	76	78.070	ENSMZEG00005006256	-	83	86.404	Maylandia_zebra
ENSCSEG00000000402	RNPS1	76	70.996	ENSMZEG00005012742	RNPS1	82	70.000	Maylandia_zebra
ENSCSEG00000000402	RNPS1	77	66.250	ENSMGAG00000010042	RNPS1	98	66.250	Meleagris_gallopavo
ENSCSEG00000000402	RNPS1	85	68.321	ENSMICG00000031543	RNPS1	85	70.833	Microcebus_murinus
ENSCSEG00000000402	RNPS1	85	68.702	ENSMOCG00000003429	Rnps1	85	71.250	Microtus_ochrogaster
ENSCSEG00000000402	RNPS1	70	67.619	ENSMMOG00000010863	RNPS1	77	70.892	Mola_mola
ENSCSEG00000000402	RNPS1	78	83.122	ENSMMOG00000004680	-	79	86.425	Mola_mola
ENSCSEG00000000402	RNPS1	85	68.061	ENSMODG00000015891	RNPS1	85	71.103	Monodelphis_domestica
ENSCSEG00000000402	RNPS1	76	83.260	ENSMALG00000013384	-	85	79.736	Monopterus_albus
ENSCSEG00000000402	RNPS1	85	68.702	ENSMUSG00000034681	Rnps1	85	71.250	Mus_musculus
ENSCSEG00000000402	RNPS1	84	68.199	MGP_PahariEiJ_G0023498	Rnps1	85	71.250	Mus_pahari
ENSCSEG00000000402	RNPS1	85	68.702	MGP_SPRETEiJ_G0022092	Rnps1	85	71.250	Mus_spretus
ENSCSEG00000000402	RNPS1	85	68.702	ENSMLUG00000016808	RNPS1	85	68.702	Myotis_lucifugus
ENSCSEG00000000402	RNPS1	85	68.702	ENSNGAG00000023702	Rnps1	85	71.250	Nannospalax_galili
ENSCSEG00000000402	RNPS1	76	77.826	ENSNBRG00000014540	-	85	86.087	Neolamprologus_brichardi
ENSCSEG00000000402	RNPS1	69	69.378	ENSNBRG00000023437	RNPS1	75	73.206	Neolamprologus_brichardi
ENSCSEG00000000402	RNPS1	88	67.528	ENSNLEG00000009243	RNPS1	87	69.725	Nomascus_leucogenys
ENSCSEG00000000402	RNPS1	85	69.466	ENSMEUG00000008882	RNPS1	85	69.466	Notamacropus_eugenii
ENSCSEG00000000402	RNPS1	85	67.939	ENSOPRG00000016422	RNPS1	85	67.939	Ochotona_princeps
ENSCSEG00000000402	RNPS1	76	78.070	ENSONIG00000019627	-	83	86.404	Oreochromis_niloticus
ENSCSEG00000000402	RNPS1	76	73.684	ENSORLG00000008033	RNPS1	94	73.039	Oryzias_latipes
ENSCSEG00000000402	RNPS1	76	74.672	ENSORLG00020020207	RNPS1	82	75.546	Oryzias_latipes_hni
ENSCSEG00000000402	RNPS1	76	74.236	ENSORLG00015000305	-	82	75.109	Oryzias_latipes_hsok
ENSCSEG00000000402	RNPS1	76	89.956	ENSORLG00015011183	RNPS1	73	89.956	Oryzias_latipes_hsok
ENSCSEG00000000402	RNPS1	85	67.557	ENSOARG00000018056	-	72	68.702	Ovis_aries
ENSCSEG00000000402	RNPS1	73	65.639	ENSPPAG00000037836	-	95	65.639	Pan_paniscus
ENSCSEG00000000402	RNPS1	87	65.428	ENSPPAG00000011845	RNPS1	86	67.083	Pan_paniscus
ENSCSEG00000000402	RNPS1	85	68.321	ENSPPRG00000011255	RNPS1	85	70.833	Panthera_pardus
ENSCSEG00000000402	RNPS1	50	72.848	ENSPTIG00000015643	RNPS1	57	84.404	Panthera_tigris_altaica
ENSCSEG00000000402	RNPS1	73	65.044	ENSPTRG00000046326	-	85	65.044	Pan_troglodytes
ENSCSEG00000000402	RNPS1	85	68.321	ENSPTRG00000031310	RNPS1	85	70.833	Pan_troglodytes
ENSCSEG00000000402	RNPS1	85	68.702	ENSPANG00000015748	RNPS1	85	71.250	Papio_anubis
ENSCSEG00000000402	RNPS1	85	67.557	ENSPSIG00000006048	RNPS1	84	67.557	Pelodiscus_sinensis
ENSCSEG00000000402	RNPS1	85	68.702	ENSPEMG00000012797	Rnps1	85	71.250	Peromyscus_maniculatus_bairdii
ENSCSEG00000000402	RNPS1	85	69.466	ENSPCIG00000025012	RNPS1	85	72.083	Phascolarctos_cinereus
ENSCSEG00000000402	RNPS1	50	74.172	ENSPCIG00000016114	-	57	82.051	Phascolarctos_cinereus
ENSCSEG00000000402	RNPS1	71	68.519	ENSPFOG00000009978	RNPS1	76	77.315	Poecilia_formosa
ENSCSEG00000000402	RNPS1	71	68.519	ENSPLAG00000009343	RNPS1	76	77.315	Poecilia_latipinna
ENSCSEG00000000402	RNPS1	71	68.664	ENSPMEG00000008552	RNPS1	76	77.315	Poecilia_mexicana
ENSCSEG00000000402	RNPS1	71	68.519	ENSPREG00000001843	RNPS1	76	77.315	Poecilia_reticulata
ENSCSEG00000000402	RNPS1	85	67.176	ENSPCAG00000004514	RNPS1	85	67.176	Procavia_capensis
ENSCSEG00000000402	RNPS1	85	68.321	ENSPCOG00000005478	RNPS1	85	70.833	Propithecus_coquereli
ENSCSEG00000000402	RNPS1	85	68.702	ENSPVAG00000005105	RNPS1	85	68.702	Pteropus_vampyrus
ENSCSEG00000000402	RNPS1	76	70.996	ENSPNYG00000000585	RNPS1	82	70.000	Pundamilia_nyererei
ENSCSEG00000000402	RNPS1	76	78.166	ENSPNAG00000025479	RNPS1	82	78.166	Pygocentrus_nattereri
ENSCSEG00000000402	RNPS1	82	66.800	ENSRNOG00000027239	AABR07037800.1	83	66.800	Rattus_norvegicus
ENSCSEG00000000402	RNPS1	85	68.321	ENSRNOG00000008703	Rnps1	85	68.321	Rattus_norvegicus
ENSCSEG00000000402	RNPS1	77	71.250	ENSRBIG00000038965	-	88	71.074	Rhinopithecus_bieti
ENSCSEG00000000402	RNPS1	85	68.702	ENSRROG00000041252	RNPS1	95	64.557	Rhinopithecus_roxellana
ENSCSEG00000000402	RNPS1	85	68.702	ENSSBOG00000027927	RNPS1	85	71.250	Saimiri_boliviensis_boliviensis
ENSCSEG00000000402	RNPS1	85	69.466	ENSSHAG00000016951	RNPS1	85	69.466	Sarcophilus_harrisii
ENSCSEG00000000402	RNPS1	76	68.085	ENSSFOG00015022746	RNPS1	85	66.383	Scleropages_formosus
ENSCSEG00000000402	RNPS1	76	77.253	ENSSFOG00015019341	-	74	76.923	Scleropages_formosus
ENSCSEG00000000402	RNPS1	76	68.996	ENSSMAG00000016933	RNPS1	82	67.841	Scophthalmus_maximus
ENSCSEG00000000402	RNPS1	84	93.281	ENSSDUG00000006433	-	84	93.281	Seriola_dumerili
ENSCSEG00000000402	RNPS1	76	64.103	ENSSDUG00000011453	RNPS1	82	66.810	Seriola_dumerili
ENSCSEG00000000402	RNPS1	74	76.339	ENSSLDG00000021341	RNPS1	81	69.196	Seriola_lalandi_dorsalis
ENSCSEG00000000402	RNPS1	85	66.794	ENSSPUG00000016588	RNPS1	84	66.794	Sphenodon_punctatus
ENSCSEG00000000402	RNPS1	70	92.417	ENSSPAG00000005411	-	82	92.417	Stegastes_partitus
ENSCSEG00000000402	RNPS1	85	68.321	ENSSSCG00000008048	RNPS1	85	68.321	Sus_scrofa
ENSCSEG00000000402	RNPS1	78	69.295	ENSTGUG00000003237	RNPS1	85	71.784	Taeniopygia_guttata
ENSCSEG00000000402	RNPS1	76	65.957	ENSTNIG00000009753	RNPS1	81	72.532	Tetraodon_nigroviridis
ENSCSEG00000000402	RNPS1	88	69.373	ENSTBEG00000009098	RNPS1	95	68.702	Tupaia_belangeri
ENSCSEG00000000402	RNPS1	85	68.702	ENSTTRG00000008220	RNPS1	85	68.702	Tursiops_truncatus
ENSCSEG00000000402	RNPS1	85	68.702	ENSUAMG00000004462	RNPS1	95	68.702	Ursus_americanus
ENSCSEG00000000402	RNPS1	85	68.702	ENSUMAG00000022327	RNPS1	85	68.702	Ursus_maritimus
ENSCSEG00000000402	RNPS1	85	68.702	ENSVVUG00000009244	RNPS1	85	68.702	Vulpes_vulpes
ENSCSEG00000000402	RNPS1	73	69.565	ENSXETG00000024439	rnps1	71	73.059	Xenopus_tropicalis
ENSCSEG00000000402	RNPS1	76	69.697	ENSXMAG00000004827	RNPS1	82	76.623	Xiphophorus_maculatus