EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000000587 (Gene tree)
Gene ID: 103386873
Gene Symbol: c1d
Alias: zgc:103509
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6080 bases
Position: chr12:462559-468638
Accession: 103386873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000000832	Sas10_Utp3	PF04000.15	2.1e-18	1	1
ENSCSEP00000000824	Sas10_Utp3	PF04000.15	2.4e-18	1	1
ENSCSEP00000000828	Sas10_Utp3	PF04000.15	2.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000000852	-	4910	-	ENSCSEP00000000824	155 (aa)	XP_024916776	UPI000497E489
ENSCSET00000000860	-	3449	-	ENSCSEP00000000832	143 (aa)	-	-
ENSCSET00000000856	-	4214	XM_008321302	ENSCSEP00000000828	155 (aa)	XP_008319524	UPI000497E489

Gene Model

Click here to download ENSCSEG00000000587's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000587's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000587	c1d	96	60.584	ENSG00000197223	C1D	100	59.155	Homo_sapiens
ENSCSEG00000000587	c1d	97	79.710	ENSAPOG00000005466	c1d	100	75.484	Acanthochromis_polyacanthus
ENSCSEG00000000587	c1d	98	59.574	ENSAMEG00000004859	C1D	97	59.574	Ailuropoda_melanoleuca
ENSCSEG00000000587	c1d	94	80.741	ENSACIG00000012684	c1d	90	79.137	Amphilophus_citrinellus
ENSCSEG00000000587	c1d	95	78.676	ENSAOCG00000020354	c1d	99	74.510	Amphiprion_ocellaris
ENSCSEG00000000587	c1d	95	78.676	ENSAPEG00000001403	c1d	99	74.510	Amphiprion_percula
ENSCSEG00000000587	c1d	97	82.609	ENSATEG00000012922	c1d	99	77.273	Anabas_testudineus
ENSCSEG00000000587	c1d	94	62.774	ENSAPLG00000009320	C1D	94	62.774	Anas_platyrhynchos
ENSCSEG00000000587	c1d	83	70.339	ENSACAG00000001337	C1D	98	69.748	Anolis_carolinensis
ENSCSEG00000000587	c1d	91	60.769	ENSANAG00000035972	-	100	58.451	Aotus_nancymaae
ENSCSEG00000000587	c1d	91	57.692	ENSANAG00000005773	-	100	55.634	Aotus_nancymaae
ENSCSEG00000000587	c1d	80	86.087	ENSACLG00000026206	c1d	94	75.342	Astatotilapia_calliptera
ENSCSEG00000000587	c1d	92	68.702	ENSAMXG00000043212	c1d	90	68.702	Astyanax_mexicanus
ENSCSEG00000000587	c1d	91	61.538	ENSBTAG00000049002	C1D	92	61.538	Bos_taurus
ENSCSEG00000000587	c1d	99	57.143	ENSCJAG00000006589	C1D	97	57.143	Callithrix_jacchus
ENSCSEG00000000587	c1d	81	55.172	ENSCJAG00000044668	-	91	55.172	Callithrix_jacchus
ENSCSEG00000000587	c1d	91	63.077	ENSCAFG00000030099	C1D	92	63.077	Canis_familiaris
ENSCSEG00000000587	c1d	91	63.077	ENSCAFG00020026997	C1D	92	63.077	Canis_lupus_dingo
ENSCSEG00000000587	c1d	91	61.538	ENSCHIG00000025729	C1D	92	61.538	Capra_hircus
ENSCSEG00000000587	c1d	77	61.818	ENSTSYG00000026573	-	70	61.818	Carlito_syrichta
ENSCSEG00000000587	c1d	91	61.538	ENSTSYG00000035739	-	92	61.538	Carlito_syrichta
ENSCSEG00000000587	c1d	79	56.637	ENSCAPG00000011523	-	94	56.637	Cavia_aperea
ENSCSEG00000000587	c1d	79	57.522	ENSCPOG00000020112	-	94	57.522	Cavia_porcellus
ENSCSEG00000000587	c1d	91	62.308	ENSCPOG00000037986	-	92	62.308	Cavia_porcellus
ENSCSEG00000000587	c1d	91	61.538	ENSCCAG00000030405	-	100	59.155	Cebus_capucinus
ENSCSEG00000000587	c1d	91	61.538	ENSCATG00000043348	-	100	59.155	Cercocebus_atys
ENSCSEG00000000587	c1d	96	61.314	ENSCATG00000045336	C1D	94	61.314	Cercocebus_atys
ENSCSEG00000000587	c1d	96	59.854	ENSCLAG00000011883	C1D	97	60.432	Chinchilla_lanigera
ENSCSEG00000000587	c1d	96	60.584	ENSCSAG00000014811	C1D	99	58.865	Chlorocebus_sabaeus
ENSCSEG00000000587	c1d	96	60.584	ENSCHOG00000006719	C1D	76	60.584	Choloepus_hoffmanni
ENSCSEG00000000587	c1d	93	60.150	ENSCPBG00000014451	C1D	90	60.150	Chrysemys_picta_bellii
ENSCSEG00000000587	c1d	81	46.552	ENSCING00000020906	-	64	45.902	Ciona_intestinalis
ENSCSEG00000000587	c1d	82	47.863	ENSCSAVG00000000150	-	67	47.863	Ciona_savignyi
ENSCSEG00000000587	c1d	96	60.584	ENSCANG00000035564	C1D	94	60.584	Colobus_angolensis_palliatus
ENSCSEG00000000587	c1d	75	62.617	ENSCANG00000036599	-	87	62.617	Colobus_angolensis_palliatus
ENSCSEG00000000587	c1d	91	61.538	ENSCGRG00001023376	C1d	97	59.712	Cricetulus_griseus_chok1gshd
ENSCSEG00000000587	c1d	91	61.538	ENSCGRG00000010245	C1d	97	59.712	Cricetulus_griseus_crigri
ENSCSEG00000000587	c1d	97	81.159	ENSCVAG00000004603	c1d	100	76.129	Cyprinodon_variegatus
ENSCSEG00000000587	c1d	86	66.667	ENSDARG00000021112	c1d	98	60.690	Danio_rerio
ENSCSEG00000000587	c1d	96	54.015	ENSDNOG00000046068	-	99	53.571	Dasypus_novemcinctus
ENSCSEG00000000587	c1d	90	62.500	ENSDORG00000003300	C1d	97	59.712	Dipodomys_ordii
ENSCSEG00000000587	c1d	57	74.390	ENSETEG00000014857	C1D	86	74.390	Echinops_telfairi
ENSCSEG00000000587	c1d	87	48.148	ENSEBUG00000006874	c1d	74	52.991	Eptatretus_burgeri
ENSCSEG00000000587	c1d	91	61.538	ENSEASG00005007307	C1D	84	61.538	Equus_asinus_asinus
ENSCSEG00000000587	c1d	99	58.865	ENSECAG00000002187	C1D	100	58.865	Equus_caballus
ENSCSEG00000000587	c1d	92	73.485	ENSELUG00000014823	c1d	97	70.922	Esox_lucius
ENSCSEG00000000587	c1d	91	61.538	ENSFCAG00000028933	C1D	92	61.538	Felis_catus
ENSCSEG00000000587	c1d	94	58.519	ENSFALG00000013640	C1D	82	58.519	Ficedula_albicollis
ENSCSEG00000000587	c1d	91	61.538	ENSFDAG00000010462	-	92	61.538	Fukomys_damarensis
ENSCSEG00000000587	c1d	91	52.672	ENSFDAG00000014175	-	91	52.672	Fukomys_damarensis
ENSCSEG00000000587	c1d	97	79.710	ENSFHEG00000010545	c1d	100	75.000	Fundulus_heteroclitus
ENSCSEG00000000587	c1d	86	72.358	ENSGMOG00000013911	-	98	72.358	Gadus_morhua
ENSCSEG00000000587	c1d	99	58.865	ENSGALG00000008765	C1D	98	58.865	Gallus_gallus
ENSCSEG00000000587	c1d	97	77.143	ENSGAFG00000012578	c1d	100	73.248	Gambusia_affinis
ENSCSEG00000000587	c1d	90	81.250	ENSGACG00000011981	c1d	100	81.250	Gasterosteus_aculeatus
ENSCSEG00000000587	c1d	83	64.407	ENSGAGG00000013383	C1D	89	60.305	Gopherus_agassizii
ENSCSEG00000000587	c1d	91	59.231	ENSGGOG00000022296	-	100	57.042	Gorilla_gorilla
ENSCSEG00000000587	c1d	97	55.072	ENSGGOG00000025808	-	81	55.634	Gorilla_gorilla
ENSCSEG00000000587	c1d	91	61.538	ENSGGOG00000025982	-	72	61.538	Gorilla_gorilla
ENSCSEG00000000587	c1d	81	86.207	ENSHBUG00000018531	c1d	85	75.510	Haplochromis_burtoni
ENSCSEG00000000587	c1d	91	61.538	ENSHGLG00000012332	-	92	61.538	Heterocephalus_glaber_female
ENSCSEG00000000587	c1d	85	58.197	ENSHGLG00000021219	-	87	58.197	Heterocephalus_glaber_female
ENSCSEG00000000587	c1d	91	61.538	ENSHGLG00100000221	-	92	61.538	Heterocephalus_glaber_male
ENSCSEG00000000587	c1d	85	59.016	ENSHGLG00100019951	-	87	59.016	Heterocephalus_glaber_male
ENSCSEG00000000587	c1d	92	74.046	ENSHCOG00000014568	C1D	96	68.243	Hippocampus_comes
ENSCSEG00000000587	c1d	92	74.046	ENSHCOG00000014589	c1d	96	68.243	Hippocampus_comes
ENSCSEG00000000587	c1d	86	67.480	ENSIPUG00000018661	c1d	85	67.480	Ictalurus_punctatus
ENSCSEG00000000587	c1d	98	57.857	ENSSTOG00000012346	C1D	99	57.857	Ictidomys_tridecemlineatus
ENSCSEG00000000587	c1d	97	53.623	ENSJJAG00000009540	-	100	53.623	Jaculus_jaculus
ENSCSEG00000000587	c1d	97	53.623	ENSJJAG00000005044	-	100	53.623	Jaculus_jaculus
ENSCSEG00000000587	c1d	96	51.095	ENSJJAG00000016086	-	95	51.095	Jaculus_jaculus
ENSCSEG00000000587	c1d	88	56.923	ENSJJAG00000023186	-	99	56.923	Jaculus_jaculus
ENSCSEG00000000587	c1d	97	80.435	ENSKMAG00000015077	c1d	100	74.194	Kryptolebias_marmoratus
ENSCSEG00000000587	c1d	97	79.710	ENSLBEG00000008351	c1d	100	74.839	Labrus_bergylta
ENSCSEG00000000587	c1d	90	65.625	ENSLACG00000007516	C1D	86	65.625	Latimeria_chalumnae
ENSCSEG00000000587	c1d	87	67.742	ENSLOCG00000016024	c1d	88	65.414	Lepisosteus_oculatus
ENSCSEG00000000587	c1d	90	62.500	ENSLAFG00000002083	C1D	91	62.500	Loxodonta_africana
ENSCSEG00000000587	c1d	96	59.854	ENSMFAG00000028681	-	94	59.854	Macaca_fascicularis
ENSCSEG00000000587	c1d	91	61.538	ENSMFAG00000034034	-	100	59.155	Macaca_fascicularis
ENSCSEG00000000587	c1d	96	61.314	ENSMFAG00000034261	C1D	94	61.314	Macaca_fascicularis
ENSCSEG00000000587	c1d	96	61.314	ENSMMUG00000041557	C1D	95	61.314	Macaca_mulatta
ENSCSEG00000000587	c1d	91	60.769	ENSMMUG00000043184	-	100	58.451	Macaca_mulatta
ENSCSEG00000000587	c1d	96	59.854	ENSMMUG00000017209	-	94	59.854	Macaca_mulatta
ENSCSEG00000000587	c1d	96	61.314	ENSMNEG00000040612	C1D	94	61.314	Macaca_nemestrina
ENSCSEG00000000587	c1d	91	61.538	ENSMNEG00000020626	-	100	59.155	Macaca_nemestrina
ENSCSEG00000000587	c1d	91	61.538	ENSMLEG00000028412	-	100	59.155	Mandrillus_leucophaeus
ENSCSEG00000000587	c1d	96	61.314	ENSMLEG00000027619	C1D	94	61.314	Mandrillus_leucophaeus
ENSCSEG00000000587	c1d	100	78.065	ENSMAMG00000022156	c1d	100	78.065	Mastacembelus_armatus
ENSCSEG00000000587	c1d	81	86.207	ENSMZEG00005027343	c1d	97	75.510	Maylandia_zebra
ENSCSEG00000000587	c1d	99	58.156	ENSMGAG00000004517	C1D	99	58.156	Meleagris_gallopavo
ENSCSEG00000000587	c1d	91	61.538	ENSMAUG00000008974	C1d	97	60.432	Mesocricetus_auratus
ENSCSEG00000000587	c1d	91	61.538	ENSMICG00000032141	C1D	92	61.538	Microcebus_murinus
ENSCSEG00000000587	c1d	91	61.538	ENSMOCG00000010860	C1d	97	59.712	Microtus_ochrogaster
ENSCSEG00000000587	c1d	97	73.913	ENSMMOG00000007332	c1d	92	72.028	Mola_mola
ENSCSEG00000000587	c1d	93	61.194	ENSMODG00000003561	C1D	94	61.194	Monodelphis_domestica
ENSCSEG00000000587	c1d	94	82.963	ENSMALG00000020864	c1d	95	84.000	Monopterus_albus
ENSCSEG00000000587	c1d	91	61.538	MGP_CAROLIEiJ_G0016110	C1d	100	63.559	Mus_caroli
ENSCSEG00000000587	c1d	91	61.538	ENSMUSG00000000581	C1d	100	63.559	Mus_musculus
ENSCSEG00000000587	c1d	98	58.571	MGP_PahariEiJ_G0016781	C1d	100	64.407	Mus_pahari
ENSCSEG00000000587	c1d	91	61.538	MGP_SPRETEiJ_G0016952	C1d	100	63.559	Mus_spretus
ENSCSEG00000000587	c1d	91	62.308	ENSMPUG00000006224	C1D	92	62.308	Mustela_putorius_furo
ENSCSEG00000000587	c1d	96	60.584	ENSMLUG00000024947	-	99	60.000	Myotis_lucifugus
ENSCSEG00000000587	c1d	96	62.044	ENSMLUG00000010791	-	99	61.429	Myotis_lucifugus
ENSCSEG00000000587	c1d	96	60.145	ENSMLUG00000029990	-	98	60.145	Myotis_lucifugus
ENSCSEG00000000587	c1d	79	59.292	ENSNGAG00000012482	-	90	59.292	Nannospalax_galili
ENSCSEG00000000587	c1d	91	58.462	ENSNGAG00000011872	-	100	55.319	Nannospalax_galili
ENSCSEG00000000587	c1d	90	57.031	ENSNGAG00000016675	-	100	53.191	Nannospalax_galili
ENSCSEG00000000587	c1d	86	81.301	ENSNBRG00000010704	c1d	97	74.830	Neolamprologus_brichardi
ENSCSEG00000000587	c1d	91	61.538	ENSNLEG00000032919	-	72	61.538	Nomascus_leucogenys
ENSCSEG00000000587	c1d	98	57.857	ENSOPRG00000009586	C1D	99	57.857	Ochotona_princeps
ENSCSEG00000000587	c1d	87	55.645	ENSODEG00000018525	-	88	55.645	Octodon_degus
ENSCSEG00000000587	c1d	91	61.538	ENSODEG00000018885	-	94	61.538	Octodon_degus
ENSCSEG00000000587	c1d	91	61.538	ENSODEG00000011242	-	92	61.538	Octodon_degus
ENSCSEG00000000587	c1d	86	85.366	ENSONIG00000001233	c1d	99	75.974	Oreochromis_niloticus
ENSCSEG00000000587	c1d	66	74.737	ENSOANG00000008385	C1D	98	69.725	Ornithorhynchus_anatinus
ENSCSEG00000000587	c1d	98	58.571	ENSOCUG00000025587	-	99	58.571	Oryctolagus_cuniculus
ENSCSEG00000000587	c1d	98	58.571	ENSOCUG00000009771	-	99	58.571	Oryctolagus_cuniculus
ENSCSEG00000000587	c1d	97	72.464	ENSORLG00000021968	c1d	99	68.831	Oryzias_latipes
ENSCSEG00000000587	c1d	94	74.074	ENSORLG00020000507	c1d	98	70.199	Oryzias_latipes_hni
ENSCSEG00000000587	c1d	94	73.881	ENSORLG00015004594	c1d	96	70.000	Oryzias_latipes_hsok
ENSCSEG00000000587	c1d	97	73.188	ENSOMEG00000004672	c1d	99	69.481	Oryzias_melastigma
ENSCSEG00000000587	c1d	91	60.000	ENSOGAG00000027934	-	92	60.000	Otolemur_garnettii
ENSCSEG00000000587	c1d	91	61.538	ENSOARG00000019931	C1D	92	61.538	Ovis_aries
ENSCSEG00000000587	c1d	91	59.231	ENSPPAG00000040091	-	75	59.231	Pan_paniscus
ENSCSEG00000000587	c1d	91	61.538	ENSPPAG00000037847	-	100	59.155	Pan_paniscus
ENSCSEG00000000587	c1d	54	61.039	ENSPPRG00000022830	-	68	61.039	Panthera_pardus
ENSCSEG00000000587	c1d	91	61.538	ENSPPRG00000017045	-	92	61.538	Panthera_pardus
ENSCSEG00000000587	c1d	91	61.538	ENSPTIG00000009414	C1D	92	61.538	Panthera_tigris_altaica
ENSCSEG00000000587	c1d	91	61.538	ENSPTRG00000023558	C1D	100	59.155	Pan_troglodytes
ENSCSEG00000000587	c1d	91	62.308	ENSPANG00000000501	-	100	59.859	Papio_anubis
ENSCSEG00000000587	c1d	96	61.314	ENSPANG00000002886	C1D	73	61.314	Papio_anubis
ENSCSEG00000000587	c1d	91	64.885	ENSPKIG00000004877	c1d	88	64.885	Paramormyrops_kingsleyae
ENSCSEG00000000587	c1d	94	59.124	ENSPSIG00000010015	C1D	94	59.124	Pelodiscus_sinensis
ENSCSEG00000000587	c1d	100	75.484	ENSPMGG00000009326	c1d	100	75.484	Periophthalmus_magnuspinnatus
ENSCSEG00000000587	c1d	93	61.194	ENSPCIG00000018629	-	94	61.194	Phascolarctos_cinereus
ENSCSEG00000000587	c1d	99	55.634	ENSPCIG00000006831	-	99	55.634	Phascolarctos_cinereus
ENSCSEG00000000587	c1d	97	78.986	ENSPFOG00000003686	c1d	100	74.839	Poecilia_formosa
ENSCSEG00000000587	c1d	98	78.571	ENSPLAG00000000228	c1d	99	78.571	Poecilia_latipinna
ENSCSEG00000000587	c1d	97	78.986	ENSPMEG00000023213	c1d	100	74.839	Poecilia_mexicana
ENSCSEG00000000587	c1d	97	79.710	ENSPREG00000000742	c1d	100	77.622	Poecilia_reticulata
ENSCSEG00000000587	c1d	91	59.231	ENSPPYG00000002294	-	100	57.042	Pongo_abelii
ENSCSEG00000000587	c1d	91	61.538	ENSPPYG00000012354	C1D	77	59.155	Pongo_abelii
ENSCSEG00000000587	c1d	87	54.400	ENSPCAG00000010088	C1D	70	54.400	Procavia_capensis
ENSCSEG00000000587	c1d	91	61.538	ENSPCOG00000016112	C1D	92	61.538	Propithecus_coquereli
ENSCSEG00000000587	c1d	91	61.538	ENSPVAG00000012692	C1D	73	61.538	Pteropus_vampyrus
ENSCSEG00000000587	c1d	81	86.207	ENSPNYG00000008789	c1d	97	76.190	Pundamilia_nyererei
ENSCSEG00000000587	c1d	95	68.382	ENSPNAG00000004219	c1d	93	68.382	Pygocentrus_nattereri
ENSCSEG00000000587	c1d	91	61.538	ENSRNOG00000005982	C1d	92	61.538	Rattus_norvegicus
ENSCSEG00000000587	c1d	91	61.538	ENSRBIG00000026211	-	100	59.155	Rhinopithecus_bieti
ENSCSEG00000000587	c1d	96	61.314	ENSRROG00000029013	C1D	94	61.314	Rhinopithecus_roxellana
ENSCSEG00000000587	c1d	91	61.538	ENSRROG00000005944	-	100	59.155	Rhinopithecus_roxellana
ENSCSEG00000000587	c1d	91	61.538	ENSSBOG00000025275	C1D	100	59.155	Saimiri_boliviensis_boliviensis
ENSCSEG00000000587	c1d	93	61.940	ENSSHAG00000008352	C1D	63	63.636	Sarcophilus_harrisii
ENSCSEG00000000587	c1d	97	66.667	ENSSFOG00015010861	c1d	100	66.429	Scleropages_formosus
ENSCSEG00000000587	c1d	97	81.884	ENSSMAG00000019230	c1d	100	77.419	Scophthalmus_maximus
ENSCSEG00000000587	c1d	97	88.406	ENSSDUG00000020213	c1d	100	81.935	Seriola_dumerili
ENSCSEG00000000587	c1d	97	86.957	ENSSLDG00000017371	c1d	100	80.645	Seriola_lalandi_dorsalis
ENSCSEG00000000587	c1d	83	64.407	ENSSPUG00000006525	C1D	90	61.069	Sphenodon_punctatus
ENSCSEG00000000587	c1d	99	75.817	ENSSPAG00000008574	c1d	99	75.817	Stegastes_partitus
ENSCSEG00000000587	c1d	91	61.538	ENSSSCG00000039331	-	92	61.538	Sus_scrofa
ENSCSEG00000000587	c1d	75	55.140	ENSSSCG00000035701	-	89	55.140	Sus_scrofa
ENSCSEG00000000587	c1d	91	61.832	ENSTGUG00000002367	C1D	92	61.364	Taeniopygia_guttata
ENSCSEG00000000587	c1d	97	76.812	ENSTRUG00000012245	c1d	89	72.789	Takifugu_rubripes
ENSCSEG00000000587	c1d	97	78.261	ENSTNIG00000009827	c1d	99	74.830	Tetraodon_nigroviridis
ENSCSEG00000000587	c1d	98	57.857	ENSTBEG00000009797	C1D	99	57.857	Tupaia_belangeri
ENSCSEG00000000587	c1d	91	60.769	ENSTTRG00000013982	C1D	81	58.451	Tursiops_truncatus
ENSCSEG00000000587	c1d	91	54.135	ENSUAMG00000025246	C1D	92	54.135	Ursus_americanus
ENSCSEG00000000587	c1d	71	51.923	ENSUMAG00000006451	-	91	52.632	Ursus_maritimus
ENSCSEG00000000587	c1d	91	61.538	ENSUMAG00000021118	-	92	61.538	Ursus_maritimus
ENSCSEG00000000587	c1d	91	61.538	ENSVPAG00000012080	C1D	73	61.538	Vicugna_pacos
ENSCSEG00000000587	c1d	91	63.077	ENSVVUG00000027629	C1D	81	63.077	Vulpes_vulpes
ENSCSEG00000000587	c1d	94	61.314	ENSXETG00000025934	c1d	94	61.314	Xenopus_tropicalis
ENSCSEG00000000587	c1d	100	76.129	ENSXCOG00000013813	c1d	100	76.129	Xiphophorus_couchianus
ENSCSEG00000000587	c1d	100	75.484	ENSXMAG00000022273	c1d	100	75.484	Xiphophorus_maculatus