EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000000591 (Gene tree)
Gene ID: 103398595
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6755 bases
Position: chr2:10654582-10661336
Accession: 103398595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000000861	TRM13	PF05206.14	8.7e-82	1	1
ENSCSEP00000000870	TRM13	PF05206.14	3.4e-80	1	1
ENSCSEP00000000870	zf-U11-48K	PF05253.12	1.2e-08	1	1
ENSCSEP00000000861	zf-U11-48K	PF05253.12	1.3e-08	1	1
ENSCSEP00000000870	zf-TRM13_CCCH	PF11722.8	1.1e-12	1	1
ENSCSEP00000000861	zf-TRM13_CCCH	PF11722.8	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000000889	-	1320	-	ENSCSEP00000000861	439 (aa)	-	-
ENSCSET00000000898	-	1257	XM_008337257	ENSCSEP00000000870	418 (aa)	XP_008335479	-

Gene Model

Click here to download ENSCSEG00000000591's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000591's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000591	trmt13	98	48.922	ENSG00000122435	TRMT13	96	48.922	Homo_sapiens
ENSCSEG00000000591	trmt13	98	63.039	ENSAPOG00000015131	trmt13	99	63.244	Acanthochromis_polyacanthus
ENSCSEG00000000591	trmt13	97	49.234	ENSAMEG00000008917	TRMT13	95	49.565	Ailuropoda_melanoleuca
ENSCSEG00000000591	trmt13	99	68.182	ENSACIG00000005804	trmt13	97	66.228	Amphilophus_citrinellus
ENSCSEG00000000591	trmt13	98	63.039	ENSAOCG00000023585	trmt13	99	63.039	Amphiprion_ocellaris
ENSCSEG00000000591	trmt13	98	63.039	ENSAPEG00000004025	trmt13	99	63.039	Amphiprion_percula
ENSCSEG00000000591	trmt13	99	66.164	ENSATEG00000006597	trmt13	98	66.164	Anabas_testudineus
ENSCSEG00000000591	trmt13	87	50.847	ENSAPLG00000014924	TRMT13	97	50.847	Anas_platyrhynchos
ENSCSEG00000000591	trmt13	99	51.940	ENSACAG00000003498	TRMT13	99	51.940	Anolis_carolinensis
ENSCSEG00000000591	trmt13	98	49.138	ENSANAG00000019525	TRMT13	96	49.138	Aotus_nancymaae
ENSCSEG00000000591	trmt13	98	70.203	ENSACLG00000020018	trmt13	99	70.203	Astatotilapia_calliptera
ENSCSEG00000000591	trmt13	97	53.304	ENSAMXG00000017963	trmt13	98	53.965	Astyanax_mexicanus
ENSCSEG00000000591	trmt13	99	48.620	ENSBTAG00000015781	TRMT13	97	48.620	Bos_taurus
ENSCSEG00000000591	trmt13	95	30.918	WBGene00013026	Y49A3A.3	96	30.918	Caenorhabditis_elegans
ENSCSEG00000000591	trmt13	98	49.458	ENSCJAG00000000200	TRMT13	89	62.595	Callithrix_jacchus
ENSCSEG00000000591	trmt13	63	48.026	ENSCAFG00000020021	TRMT13	96	48.852	Canis_familiaris
ENSCSEG00000000591	trmt13	59	54.826	ENSCAFG00020011572	TRMT13	90	54.826	Canis_lupus_dingo
ENSCSEG00000000591	trmt13	99	48.832	ENSCHIG00000015395	TRMT13	97	48.832	Capra_hircus
ENSCSEG00000000591	trmt13	97	48.707	ENSTSYG00000010811	TRMT13	99	52.830	Carlito_syrichta
ENSCSEG00000000591	trmt13	73	38.720	ENSCAPG00000009085	TRMT13	91	40.549	Cavia_aperea
ENSCSEG00000000591	trmt13	97	48.899	ENSCPOG00000000694	TRMT13	96	48.696	Cavia_porcellus
ENSCSEG00000000591	trmt13	99	48.414	ENSCCAG00000023772	TRMT13	98	48.414	Cebus_capucinus
ENSCSEG00000000591	trmt13	99	48.626	ENSCATG00000033556	TRMT13	98	48.626	Cercocebus_atys
ENSCSEG00000000591	trmt13	88	48.687	ENSCLAG00000008220	TRMT13	99	48.687	Chinchilla_lanigera
ENSCSEG00000000591	trmt13	99	48.626	ENSCSAG00000001506	TRMT13	98	48.626	Chlorocebus_sabaeus
ENSCSEG00000000591	trmt13	99	49.892	ENSCPBG00000026671	TRMT13	97	49.892	Chrysemys_picta_bellii
ENSCSEG00000000591	trmt13	99	48.414	ENSCANG00000034659	TRMT13	98	48.414	Colobus_angolensis_palliatus
ENSCSEG00000000591	trmt13	99	49.367	ENSCGRG00001021601	Trmt13	97	49.367	Cricetulus_griseus_chok1gshd
ENSCSEG00000000591	trmt13	50	45.382	ENSCGRG00000000093	-	96	45.382	Cricetulus_griseus_crigri
ENSCSEG00000000591	trmt13	99	64.103	ENSCVAG00000017342	trmt13	95	64.392	Cyprinodon_variegatus
ENSCSEG00000000591	trmt13	99	54.967	ENSDARG00000102846	trmt13	98	54.967	Danio_rerio
ENSCSEG00000000591	trmt13	59	52.852	ENSDNOG00000001710	TRMT13	80	52.852	Dasypus_novemcinctus
ENSCSEG00000000591	trmt13	97	47.046	ENSDORG00000015808	Trmt13	95	47.277	Dipodomys_ordii
ENSCSEG00000000591	trmt13	98	35.227	FBgn0037435	CG18048	95	35.227	Drosophila_melanogaster
ENSCSEG00000000591	trmt13	97	43.683	ENSETEG00000005819	TRMT13	95	43.683	Echinops_telfairi
ENSCSEG00000000591	trmt13	96	46.501	ENSEBUG00000014444	trmt13	96	46.501	Eptatretus_burgeri
ENSCSEG00000000591	trmt13	97	48.578	ENSEASG00005015918	TRMT13	95	48.696	Equus_asinus_asinus
ENSCSEG00000000591	trmt13	97	48.578	ENSECAG00000022626	TRMT13	95	48.696	Equus_caballus
ENSCSEG00000000591	trmt13	81	50.000	ENSEEUG00000000294	TRMT13	75	50.000	Erinaceus_europaeus
ENSCSEG00000000591	trmt13	99	53.348	ENSELUG00000003803	trmt13	99	53.780	Esox_lucius
ENSCSEG00000000591	trmt13	98	48.060	ENSFCAG00000030618	TRMT13	98	48.148	Felis_catus
ENSCSEG00000000591	trmt13	96	51.991	ENSFALG00000002424	TRMT13	95	51.991	Ficedula_albicollis
ENSCSEG00000000591	trmt13	99	47.447	ENSFDAG00000006342	TRMT13	97	47.447	Fukomys_damarensis
ENSCSEG00000000591	trmt13	82	68.490	ENSFHEG00000022954	trmt13	99	67.164	Fundulus_heteroclitus
ENSCSEG00000000591	trmt13	96	57.178	ENSGMOG00000013223	trmt13	99	57.178	Gadus_morhua
ENSCSEG00000000591	trmt13	96	51.454	ENSGALG00000005290	TRMT13	98	51.293	Gallus_gallus
ENSCSEG00000000591	trmt13	80	68.169	ENSGAFG00000001577	trmt13	82	68.169	Gambusia_affinis
ENSCSEG00000000591	trmt13	99	70.354	ENSGACG00000013428	trmt13	98	70.354	Gasterosteus_aculeatus
ENSCSEG00000000591	trmt13	99	50.108	ENSGAGG00000023303	TRMT13	97	57.090	Gopherus_agassizii
ENSCSEG00000000591	trmt13	98	48.707	ENSGGOG00000005616	TRMT13	96	48.707	Gorilla_gorilla
ENSCSEG00000000591	trmt13	98	69.955	ENSHBUG00000007754	trmt13	99	69.955	Haplochromis_burtoni
ENSCSEG00000000591	trmt13	98	47.186	ENSHGLG00000002164	TRMT13	96	47.629	Heterocephalus_glaber_female
ENSCSEG00000000591	trmt13	98	47.186	ENSHGLG00100001618	TRMT13	96	47.629	Heterocephalus_glaber_male
ENSCSEG00000000591	trmt13	98	58.469	ENSHCOG00000020553	trmt13	99	58.469	Hippocampus_comes
ENSCSEG00000000591	trmt13	98	55.481	ENSIPUG00000024787	trmt13	98	56.152	Ictalurus_punctatus
ENSCSEG00000000591	trmt13	99	48.434	ENSSTOG00000013483	TRMT13	98	48.434	Ictidomys_tridecemlineatus
ENSCSEG00000000591	trmt13	99	46.610	ENSJJAG00000018012	Trmt13	99	46.610	Jaculus_jaculus
ENSCSEG00000000591	trmt13	69	63.898	ENSKMAG00000007639	trmt13	99	63.898	Kryptolebias_marmoratus
ENSCSEG00000000591	trmt13	98	65.665	ENSLBEG00000020238	trmt13	99	66.738	Labrus_bergylta
ENSCSEG00000000591	trmt13	99	52.165	ENSLACG00000013153	TRMT13	98	52.165	Latimeria_chalumnae
ENSCSEG00000000591	trmt13	99	52.484	ENSLOCG00000000418	trmt13	99	52.484	Lepisosteus_oculatus
ENSCSEG00000000591	trmt13	75	49.444	ENSLAFG00000002383	TRMT13	98	49.036	Loxodonta_africana
ENSCSEG00000000591	trmt13	99	48.414	ENSMFAG00000034681	TRMT13	98	48.414	Macaca_fascicularis
ENSCSEG00000000591	trmt13	99	48.414	ENSMMUG00000004243	TRMT13	98	48.414	Macaca_mulatta
ENSCSEG00000000591	trmt13	99	48.414	ENSMNEG00000036102	TRMT13	98	48.414	Macaca_nemestrina
ENSCSEG00000000591	trmt13	99	48.414	ENSMLEG00000034258	TRMT13	98	48.414	Mandrillus_leucophaeus
ENSCSEG00000000591	trmt13	97	69.163	ENSMAMG00000016597	trmt13	96	69.163	Mastacembelus_armatus
ENSCSEG00000000591	trmt13	98	69.977	ENSMZEG00005020959	trmt13	99	69.977	Maylandia_zebra
ENSCSEG00000000591	trmt13	88	51.675	ENSMGAG00000006970	TRMT13	98	51.675	Meleagris_gallopavo
ENSCSEG00000000591	trmt13	99	47.650	ENSMAUG00000010448	Trmt13	97	48.626	Mesocricetus_auratus
ENSCSEG00000000591	trmt13	98	49.353	ENSMICG00000005283	TRMT13	96	49.353	Microcebus_murinus
ENSCSEG00000000591	trmt13	99	48.428	ENSMOCG00000019914	Trmt13	97	48.428	Microtus_ochrogaster
ENSCSEG00000000591	trmt13	60	65.649	ENSMMOG00000007762	trmt13	90	65.649	Mola_mola
ENSCSEG00000000591	trmt13	97	48.922	ENSMODG00000003646	TRMT13	96	48.922	Monodelphis_domestica
ENSCSEG00000000591	trmt13	99	71.396	ENSMALG00000020965	trmt13	99	71.396	Monopterus_albus
ENSCSEG00000000591	trmt13	99	48.326	MGP_CAROLIEiJ_G0025568	Trmt13	98	49.724	Mus_caroli
ENSCSEG00000000591	trmt13	99	48.305	ENSMUSG00000033439	Trmt13	98	49.724	Mus_musculus
ENSCSEG00000000591	trmt13	98	48.614	MGP_PahariEiJ_G0027014	Trmt13	96	48.614	Mus_pahari
ENSCSEG00000000591	trmt13	97	49.142	MGP_SPRETEiJ_G0026518	Trmt13	98	49.724	Mus_spretus
ENSCSEG00000000591	trmt13	77	48.378	ENSMPUG00000002078	-	97	48.378	Mustela_putorius_furo
ENSCSEG00000000591	trmt13	97	49.892	ENSMLUG00000002124	TRMT13	95	49.892	Myotis_lucifugus
ENSCSEG00000000591	trmt13	99	65.393	ENSNBRG00000006783	trmt13	99	65.393	Neolamprologus_brichardi
ENSCSEG00000000591	trmt13	98	48.707	ENSNLEG00000035917	TRMT13	96	48.707	Nomascus_leucogenys
ENSCSEG00000000591	trmt13	53	45.726	ENSMEUG00000013346	-	94	45.726	Notamacropus_eugenii
ENSCSEG00000000591	trmt13	59	54.054	ENSOPRG00000012048	TRMT13	54	54.054	Ochotona_princeps
ENSCSEG00000000591	trmt13	98	70.404	ENSONIG00000004574	trmt13	99	70.179	Oreochromis_niloticus
ENSCSEG00000000591	trmt13	88	50.118	ENSOANG00000012057	TRMT13	97	50.118	Ornithorhynchus_anatinus
ENSCSEG00000000591	trmt13	97	48.246	ENSOCUG00000023095	TRMT13	95	48.253	Oryctolagus_cuniculus
ENSCSEG00000000591	trmt13	99	59.868	ENSORLG00000003320	trmt13	99	60.307	Oryzias_latipes
ENSCSEG00000000591	trmt13	98	63.596	ENSORLG00020005972	trmt13	98	63.596	Oryzias_latipes_hni
ENSCSEG00000000591	trmt13	99	64.693	ENSORLG00015002270	trmt13	99	65.132	Oryzias_latipes_hsok
ENSCSEG00000000591	trmt13	98	65.632	ENSOMEG00000006724	trmt13	94	66.372	Oryzias_melastigma
ENSCSEG00000000591	trmt13	97	48.380	ENSOGAG00000005618	TRMT13	93	48.380	Otolemur_garnettii
ENSCSEG00000000591	trmt13	99	48.832	ENSOARG00000017983	TRMT13	97	48.832	Ovis_aries
ENSCSEG00000000591	trmt13	98	48.707	ENSPPAG00000043736	TRMT13	96	48.707	Pan_paniscus
ENSCSEG00000000591	trmt13	98	48.060	ENSPPRG00000003424	TRMT13	98	48.148	Panthera_pardus
ENSCSEG00000000591	trmt13	98	48.060	ENSPTIG00000018598	TRMT13	98	48.148	Panthera_tigris_altaica
ENSCSEG00000000591	trmt13	98	48.922	ENSPTRG00000001001	TRMT13	96	48.922	Pan_troglodytes
ENSCSEG00000000591	trmt13	99	48.414	ENSPANG00000007598	TRMT13	98	48.414	Papio_anubis
ENSCSEG00000000591	trmt13	98	56.889	ENSPKIG00000001514	trmt13	99	56.889	Paramormyrops_kingsleyae
ENSCSEG00000000591	trmt13	87	48.792	ENSPSIG00000012703	TRMT13	99	48.792	Pelodiscus_sinensis
ENSCSEG00000000591	trmt13	98	62.955	ENSPMGG00000013298	trmt13	94	62.955	Periophthalmus_magnuspinnatus
ENSCSEG00000000591	trmt13	99	49.684	ENSPEMG00000000275	Trmt13	97	49.684	Peromyscus_maniculatus_bairdii
ENSCSEG00000000591	trmt13	97	46.947	ENSPMAG00000000823	trmt13	98	46.751	Petromyzon_marinus
ENSCSEG00000000591	trmt13	98	49.573	ENSPCIG00000007699	TRMT13	98	49.786	Phascolarctos_cinereus
ENSCSEG00000000591	trmt13	99	64.920	ENSPFOG00000008675	trmt13	97	64.920	Poecilia_formosa
ENSCSEG00000000591	trmt13	98	64.944	ENSPLAG00000009709	trmt13	100	64.944	Poecilia_latipinna
ENSCSEG00000000591	trmt13	98	65.022	ENSPMEG00000022954	trmt13	100	65.022	Poecilia_mexicana
ENSCSEG00000000591	trmt13	80	70.225	ENSPREG00000005645	trmt13	94	68.116	Poecilia_reticulata
ENSCSEG00000000591	trmt13	100	48.008	ENSPPYG00000001120	TRMT13	99	48.008	Pongo_abelii
ENSCSEG00000000591	trmt13	98	49.458	ENSPCAG00000002340	TRMT13	96	49.458	Procavia_capensis
ENSCSEG00000000591	trmt13	100	48.101	ENSPCOG00000017984	TRMT13	98	48.101	Propithecus_coquereli
ENSCSEG00000000591	trmt13	99	48.298	ENSPVAG00000017430	TRMT13	96	48.298	Pteropus_vampyrus
ENSCSEG00000000591	trmt13	98	68.934	ENSPNYG00000013690	trmt13	99	68.934	Pundamilia_nyererei
ENSCSEG00000000591	trmt13	98	54.705	ENSPNAG00000022130	trmt13	99	54.705	Pygocentrus_nattereri
ENSCSEG00000000591	trmt13	97	49.130	ENSRNOG00000015140	Trmt13	93	49.130	Rattus_norvegicus
ENSCSEG00000000591	trmt13	99	48.414	ENSRBIG00000037686	TRMT13	98	48.414	Rhinopithecus_bieti
ENSCSEG00000000591	trmt13	98	49.451	ENSRROG00000044057	TRMT13	98	48.414	Rhinopithecus_roxellana
ENSCSEG00000000591	trmt13	99	48.203	ENSSBOG00000026541	TRMT13	98	48.203	Saimiri_boliviensis_boliviensis
ENSCSEG00000000591	trmt13	88	50.358	ENSSHAG00000005213	TRMT13	93	50.358	Sarcophilus_harrisii
ENSCSEG00000000591	trmt13	99	56.889	ENSSFOG00015017560	trmt13	98	56.889	Scleropages_formosus
ENSCSEG00000000591	trmt13	99	66.383	ENSSMAG00000014592	trmt13	99	66.383	Scophthalmus_maximus
ENSCSEG00000000591	trmt13	99	67.296	ENSSDUG00000015508	trmt13	99	67.083	Seriola_dumerili
ENSCSEG00000000591	trmt13	100	66.736	ENSSLDG00000019060	trmt13	99	66.736	Seriola_lalandi_dorsalis
ENSCSEG00000000591	trmt13	97	44.540	ENSSARG00000010344	TRMT13	98	44.540	Sorex_araneus
ENSCSEG00000000591	trmt13	95	50.446	ENSSPUG00000016339	TRMT13	98	50.446	Sphenodon_punctatus
ENSCSEG00000000591	trmt13	97	67.627	ENSSPAG00000011922	trmt13	99	67.253	Stegastes_partitus
ENSCSEG00000000591	trmt13	98	49.781	ENSSSCG00000006869	TRMT13	97	49.781	Sus_scrofa
ENSCSEG00000000591	trmt13	98	51.310	ENSTGUG00000005253	TRMT13	98	51.310	Taeniopygia_guttata
ENSCSEG00000000591	trmt13	98	64.206	ENSTRUG00000008400	trmt13	99	63.858	Takifugu_rubripes
ENSCSEG00000000591	trmt13	66	46.835	ENSTBEG00000008911	TRMT13	76	46.835	Tupaia_belangeri
ENSCSEG00000000591	trmt13	97	48.661	ENSUAMG00000017251	TRMT13	95	48.661	Ursus_americanus
ENSCSEG00000000591	trmt13	97	49.015	ENSUMAG00000007901	TRMT13	99	47.786	Ursus_maritimus
ENSCSEG00000000591	trmt13	75	63.043	ENSVPAG00000001034	TRMT13	82	63.043	Vicugna_pacos
ENSCSEG00000000591	trmt13	97	48.578	ENSVVUG00000021996	TRMT13	95	48.696	Vulpes_vulpes
ENSCSEG00000000591	trmt13	99	52.423	ENSXETG00000013204	trmt13	99	52.423	Xenopus_tropicalis
ENSCSEG00000000591	trmt13	98	64.350	ENSXMAG00000010765	trmt13	100	64.350	Xiphophorus_maculatus