EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000000690 (Gene tree)
Gene ID: 103384546
Gene Symbol: -
Alias: apo2b
Full Name: probable C->U-editing enzyme APOBEC-2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5122 bases
Position: chr10:2357286-2362407
Accession: 103384546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000000982	APOBEC_N	PF08210.11	4.7e-44	1	1
ENSCSEP00000000982	APOBEC_C	PF05240.14	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001010	-	1488	XM_008318100	ENSCSEP00000000982	265 (aa)	XP_008316322	UPI000D6275A0

Gene Model

Click here to download ENSCSEG00000000690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000690's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000000690	-	63	33.516	ENSCSEG00000018589	aicda	86	33.516
ENSCSEG00000000690	-	100	50.187	ENSCSEG00000020201	apobec2a	75	60.638

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000690	-	69	57.592	ENSG00000124701	APOBEC2	85	57.592	Homo_sapiens
ENSCSEG00000000690	-	100	62.222	ENSAPOG00000019390	apobec2b	70	75.532	Acanthochromis_polyacanthus
ENSCSEG00000000690	-	65	55.556	ENSAMEG00000004467	APOBEC2	71	55.556	Ailuropoda_melanoleuca
ENSCSEG00000000690	-	100	62.963	ENSACIG00000002472	APOBEC2	79	73.404	Amphilophus_citrinellus
ENSCSEG00000000690	-	72	53.125	ENSACIG00000016370	apobec2a	72	54.301	Amphilophus_citrinellus
ENSCSEG00000000690	-	100	61.566	ENSAOCG00000023355	apobec2b	70	75.532	Amphiprion_ocellaris
ENSCSEG00000000690	-	91	51.626	ENSAOCG00000003291	apobec2a	77	57.979	Amphiprion_ocellaris
ENSCSEG00000000690	-	100	61.566	ENSAPEG00000004591	apobec2b	70	75.532	Amphiprion_percula
ENSCSEG00000000690	-	91	51.220	ENSAPEG00000003630	apobec2a	77	57.447	Amphiprion_percula
ENSCSEG00000000690	-	100	50.929	ENSATEG00000000956	apobec2a	98	57.143	Anabas_testudineus
ENSCSEG00000000690	-	100	61.993	ENSATEG00000023043	APOBEC2	70	75.532	Anabas_testudineus
ENSCSEG00000000690	-	84	49.345	ENSAPLG00000002895	APOBEC2	83	56.915	Anas_platyrhynchos
ENSCSEG00000000690	-	80	47.032	ENSACAG00000016506	APOBEC2	95	53.073	Anolis_carolinensis
ENSCSEG00000000690	-	69	57.592	ENSANAG00000026993	APOBEC2	85	57.592	Aotus_nancymaae
ENSCSEG00000000690	-	100	61.852	ENSACLG00000007634	APOBEC2	70	74.468	Astatotilapia_calliptera
ENSCSEG00000000690	-	66	54.857	ENSACLG00000026736	-	97	55.814	Astatotilapia_calliptera
ENSCSEG00000000690	-	83	51.327	ENSAMXG00000042992	apobec2a	75	56.250	Astyanax_mexicanus
ENSCSEG00000000690	-	77	60.577	ENSAMXG00000015966	apobec2b	68	62.827	Astyanax_mexicanus
ENSCSEG00000000690	-	69	57.068	ENSBTAG00000005974	APOBEC2	61	57.068	Bos_taurus
ENSCSEG00000000690	-	69	57.592	ENSCJAG00000004063	APOBEC2	85	57.592	Callithrix_jacchus
ENSCSEG00000000690	-	69	57.068	ENSCAFG00000001575	APOBEC2	85	57.068	Canis_familiaris
ENSCSEG00000000690	-	69	57.068	ENSCAFG00020008306	APOBEC2	85	57.068	Canis_lupus_dingo
ENSCSEG00000000690	-	69	56.021	ENSCHIG00000026348	APOBEC2	85	56.021	Capra_hircus
ENSCSEG00000000690	-	69	57.592	ENSTSYG00000008206	APOBEC2	84	57.592	Carlito_syrichta
ENSCSEG00000000690	-	69	57.068	ENSCAPG00000015084	APOBEC2	84	57.068	Cavia_aperea
ENSCSEG00000000690	-	69	57.068	ENSCPOG00000036103	APOBEC2	84	57.068	Cavia_porcellus
ENSCSEG00000000690	-	69	57.592	ENSCCAG00000033987	APOBEC2	85	57.592	Cebus_capucinus
ENSCSEG00000000690	-	69	58.115	ENSCATG00000010691	APOBEC2	85	58.115	Cercocebus_atys
ENSCSEG00000000690	-	69	57.592	ENSCLAG00000013817	APOBEC2	84	57.592	Chinchilla_lanigera
ENSCSEG00000000690	-	69	58.115	ENSCSAG00000011177	APOBEC2	85	58.115	Chlorocebus_sabaeus
ENSCSEG00000000690	-	65	55.556	ENSCHOG00000008930	APOBEC2	100	55.556	Choloepus_hoffmanni
ENSCSEG00000000690	-	68	56.989	ENSCPBG00000017469	APOBEC2	85	57.219	Chrysemys_picta_bellii
ENSCSEG00000000690	-	69	57.592	ENSCANG00000035072	APOBEC2	85	57.592	Colobus_angolensis_palliatus
ENSCSEG00000000690	-	69	56.021	ENSCGRG00001014983	Apobec2	85	56.021	Cricetulus_griseus_chok1gshd
ENSCSEG00000000690	-	69	56.021	ENSCGRG00000007835	Apobec2	85	56.021	Cricetulus_griseus_crigri
ENSCSEG00000000690	-	100	62.313	ENSCVAG00000012342	apobec2b	71	73.936	Cyprinodon_variegatus
ENSCSEG00000000690	-	70	60.106	ENSDARG00000018881	apobec2a	70	60.106	Danio_rerio
ENSCSEG00000000690	-	88	53.165	ENSDARG00000113992	apobec2b	70	61.053	Danio_rerio
ENSCSEG00000000690	-	69	40.299	ENSDNOG00000033914	APOBEC2	86	40.299	Dasypus_novemcinctus
ENSCSEG00000000690	-	69	56.545	ENSDORG00000006447	Apobec2	83	56.545	Dipodomys_ordii
ENSCSEG00000000690	-	69	57.068	ENSETEG00000000624	APOBEC2	83	57.068	Echinops_telfairi
ENSCSEG00000000690	-	68	54.891	ENSEASG00005002937	APOBEC2	83	59.119	Equus_asinus_asinus
ENSCSEG00000000690	-	79	53.241	ENSECAG00000006576	APOBEC2	85	56.545	Equus_caballus
ENSCSEG00000000690	-	69	59.686	ENSEEUG00000006046	APOBEC2	85	59.686	Erinaceus_europaeus
ENSCSEG00000000690	-	71	57.143	ENSELUG00000003736	apobec2a	67	57.143	Esox_lucius
ENSCSEG00000000690	-	69	56.021	ENSFCAG00000004108	APOBEC2	85	56.021	Felis_catus
ENSCSEG00000000690	-	85	41.739	ENSFALG00000003910	APOBEC2	83	47.090	Ficedula_albicollis
ENSCSEG00000000690	-	69	57.068	ENSFDAG00000006015	APOBEC2	85	57.068	Fukomys_damarensis
ENSCSEG00000000690	-	77	73.039	ENSFHEG00000005492	apobec2b	80	73.936	Fundulus_heteroclitus
ENSCSEG00000000690	-	65	58.523	ENSGMOG00000007028	apobec2a	100	58.523	Gadus_morhua
ENSCSEG00000000690	-	76	67.476	ENSGMOG00000006819	apobec2b	78	68.947	Gadus_morhua
ENSCSEG00000000690	-	85	49.130	ENSGALG00000003226	APOBEC2	85	56.614	Gallus_gallus
ENSCSEG00000000690	-	100	61.049	ENSGAFG00000007634	apobec2b	61	75.532	Gambusia_affinis
ENSCSEG00000000690	-	100	63.670	ENSGACG00000009663	apobec2b	84	76.596	Gasterosteus_aculeatus
ENSCSEG00000000690	-	70	57.979	ENSGACG00000011671	apobec2a	100	57.979	Gasterosteus_aculeatus
ENSCSEG00000000690	-	68	56.989	ENSGAGG00000010347	APOBEC2	85	57.219	Gopherus_agassizii
ENSCSEG00000000690	-	69	57.592	ENSGGOG00000001099	APOBEC2	83	57.592	Gorilla_gorilla
ENSCSEG00000000690	-	100	61.852	ENSHBUG00000005993	apobec2b	70	74.468	Haplochromis_burtoni
ENSCSEG00000000690	-	77	56.585	ENSHBUG00000015890	apobec2a	75	59.358	Haplochromis_burtoni
ENSCSEG00000000690	-	69	57.592	ENSHGLG00000017169	APOBEC2	84	57.592	Heterocephalus_glaber_female
ENSCSEG00000000690	-	69	57.592	ENSHGLG00100019442	APOBEC2	84	57.592	Heterocephalus_glaber_male
ENSCSEG00000000690	-	100	63.060	ENSHCOG00000002712	APOBEC2	71	73.684	Hippocampus_comes
ENSCSEG00000000690	-	75	55.721	ENSHCOG00000020319	apobec2a	77	57.447	Hippocampus_comes
ENSCSEG00000000690	-	100	52.593	ENSIPUG00000013784	Apobec2	71	63.684	Ictalurus_punctatus
ENSCSEG00000000690	-	79	52.535	ENSIPUG00000017355	apobec2a	54	56.545	Ictalurus_punctatus
ENSCSEG00000000690	-	69	57.592	ENSSTOG00000023643	APOBEC2	85	57.592	Ictidomys_tridecemlineatus
ENSCSEG00000000690	-	69	56.021	ENSJJAG00000009733	Apobec2	85	56.021	Jaculus_jaculus
ENSCSEG00000000690	-	99	65.414	ENSKMAG00000020631	apobec2b	71	77.005	Kryptolebias_marmoratus
ENSCSEG00000000690	-	84	69.058	ENSLBEG00000009422	-	67	75.532	Labrus_bergylta
ENSCSEG00000000690	-	100	47.191	ENSLBEG00000025214	apobec2a	78	57.447	Labrus_bergylta
ENSCSEG00000000690	-	69	60.215	ENSLACG00000015985	APOBEC2	81	60.215	Latimeria_chalumnae
ENSCSEG00000000690	-	75	62.871	ENSLOCG00000012415	apobec2b	68	63.830	Lepisosteus_oculatus
ENSCSEG00000000690	-	69	57.592	ENSLAFG00000016563	APOBEC2	85	57.592	Loxodonta_africana
ENSCSEG00000000690	-	69	58.115	ENSMFAG00000044645	APOBEC2	85	58.115	Macaca_fascicularis
ENSCSEG00000000690	-	69	58.115	ENSMMUG00000021171	APOBEC2	85	58.115	Macaca_mulatta
ENSCSEG00000000690	-	69	58.115	ENSMNEG00000045497	APOBEC2	85	58.115	Macaca_nemestrina
ENSCSEG00000000690	-	69	58.115	ENSMLEG00000028328	APOBEC2	85	58.115	Mandrillus_leucophaeus
ENSCSEG00000000690	-	74	58.209	ENSMAMG00000023685	apobec2a	74	59.043	Mastacembelus_armatus
ENSCSEG00000000690	-	100	60.498	ENSMAMG00000007926	APOBEC2	69	74.468	Mastacembelus_armatus
ENSCSEG00000000690	-	100	63.235	ENSMZEG00005027159	APOBEC2	70	75.000	Maylandia_zebra
ENSCSEG00000000690	-	77	56.098	ENSMZEG00005005240	-	90	56.897	Maylandia_zebra
ENSCSEG00000000690	-	85	49.130	ENSMGAG00000010173	APOBEC2	94	55.307	Meleagris_gallopavo
ENSCSEG00000000690	-	79	53.241	ENSMAUG00000011016	Apobec2	85	56.545	Mesocricetus_auratus
ENSCSEG00000000690	-	82	52.889	ENSMICG00000043339	APOBEC2	85	57.592	Microcebus_murinus
ENSCSEG00000000690	-	69	57.068	ENSMOCG00000001904	Apobec2	85	57.068	Microtus_ochrogaster
ENSCSEG00000000690	-	100	59.926	ENSMMOG00000008681	apobec2b	71	71.277	Mola_mola
ENSCSEG00000000690	-	77	51.364	ENSMODG00000013090	APOBEC2	86	55.497	Monodelphis_domestica
ENSCSEG00000000690	-	100	64.103	ENSMALG00000013779	APOBEC2	74	75.000	Monopterus_albus
ENSCSEG00000000690	-	72	55.670	ENSMALG00000020523	apobec2a	76	55.851	Monopterus_albus
ENSCSEG00000000690	-	69	56.021	MGP_CAROLIEiJ_G0021727	Apobec2	85	56.021	Mus_caroli
ENSCSEG00000000690	-	69	56.021	ENSMUSG00000040694	Apobec2	85	56.021	Mus_musculus
ENSCSEG00000000690	-	69	56.021	MGP_PahariEiJ_G0020716	Apobec2	85	56.021	Mus_pahari
ENSCSEG00000000690	-	69	57.592	ENSMPUG00000013691	APOBEC2	82	57.592	Mustela_putorius_furo
ENSCSEG00000000690	-	69	56.021	ENSMLUG00000011327	APOBEC2	83	56.021	Myotis_lucifugus
ENSCSEG00000000690	-	69	55.497	ENSNGAG00000013717	Apobec2	85	55.497	Nannospalax_galili
ENSCSEG00000000690	-	100	63.333	ENSNBRG00000018806	apobec2b	63	76.064	Neolamprologus_brichardi
ENSCSEG00000000690	-	70	58.824	ENSNBRG00000021776	apobec2a	75	58.824	Neolamprologus_brichardi
ENSCSEG00000000690	-	69	57.592	ENSNLEG00000005057	APOBEC2	85	57.592	Nomascus_leucogenys
ENSCSEG00000000690	-	77	51.818	ENSMEUG00000011623	APOBEC2	86	56.021	Notamacropus_eugenii
ENSCSEG00000000690	-	69	57.068	ENSOPRG00000014808	APOBEC2	84	57.068	Ochotona_princeps
ENSCSEG00000000690	-	69	57.592	ENSODEG00000016183	APOBEC2	83	57.592	Octodon_degus
ENSCSEG00000000690	-	96	50.781	ENSONIG00000004644	-	75	60.428	Oreochromis_niloticus
ENSCSEG00000000690	-	100	62.963	ENSONIG00000012289	apobec2b	70	75.532	Oreochromis_niloticus
ENSCSEG00000000690	-	62	55.357	ENSOANG00000000824	APOBEC2	98	54.190	Ornithorhynchus_anatinus
ENSCSEG00000000690	-	69	57.592	ENSOCUG00000028008	APOBEC2	84	57.592	Oryctolagus_cuniculus
ENSCSEG00000000690	-	100	63.235	ENSORLG00000022372	APOBEC2	71	77.128	Oryzias_latipes
ENSCSEG00000000690	-	91	49.383	ENSORLG00000010752	apobec2a	80	57.672	Oryzias_latipes
ENSCSEG00000000690	-	100	63.603	ENSORLG00020006164	APOBEC2	71	77.660	Oryzias_latipes_hni
ENSCSEG00000000690	-	91	49.383	ENSORLG00020004153	apobec2a	80	57.672	Oryzias_latipes_hni
ENSCSEG00000000690	-	91	49.383	ENSORLG00015021781	apobec2a	80	57.672	Oryzias_latipes_hsok
ENSCSEG00000000690	-	100	63.603	ENSORLG00015022089	-	71	77.660	Oryzias_latipes_hsok
ENSCSEG00000000690	-	100	63.569	ENSOMEG00000015449	APOBEC2	77	75.532	Oryzias_melastigma
ENSCSEG00000000690	-	88	50.847	ENSOMEG00000001311	apobec2a	97	51.293	Oryzias_melastigma
ENSCSEG00000000690	-	82	52.444	ENSOGAG00000002632	APOBEC2	85	57.068	Otolemur_garnettii
ENSCSEG00000000690	-	69	56.545	ENSOARG00000000820	APOBEC2	85	56.545	Ovis_aries
ENSCSEG00000000690	-	69	57.592	ENSPPAG00000035598	APOBEC2	83	57.592	Pan_paniscus
ENSCSEG00000000690	-	69	56.021	ENSPPRG00000008530	APOBEC2	85	56.021	Panthera_pardus
ENSCSEG00000000690	-	69	56.021	ENSPTIG00000011084	APOBEC2	85	56.021	Panthera_tigris_altaica
ENSCSEG00000000690	-	69	57.592	ENSPTRG00000029679	APOBEC2	83	57.592	Pan_troglodytes
ENSCSEG00000000690	-	69	58.115	ENSPANG00000007121	APOBEC2	85	58.115	Papio_anubis
ENSCSEG00000000690	-	78	54.709	ENSPKIG00000005395	apobec2a	75	61.622	Paramormyrops_kingsleyae
ENSCSEG00000000690	-	99	53.333	ENSPKIG00000004741	apobec2b	68	63.298	Paramormyrops_kingsleyae
ENSCSEG00000000690	-	68	58.065	ENSPSIG00000013480	APOBEC2	82	58.289	Pelodiscus_sinensis
ENSCSEG00000000690	-	76	56.158	ENSPMGG00000004044	apobec2a	76	57.447	Periophthalmus_magnuspinnatus
ENSCSEG00000000690	-	100	65.038	ENSPMGG00000002686	APOBEC2	56	76.064	Periophthalmus_magnuspinnatus
ENSCSEG00000000690	-	69	56.545	ENSPEMG00000005724	Apobec2	85	56.545	Peromyscus_maniculatus_bairdii
ENSCSEG00000000690	-	100	63.806	ENSPFOG00000001216	apobec2b	71	75.532	Poecilia_formosa
ENSCSEG00000000690	-	100	63.806	ENSPLAG00000002074	apobec2b	77	75.000	Poecilia_latipinna
ENSCSEG00000000690	-	100	63.806	ENSPMEG00000017537	apobec2b	71	75.532	Poecilia_mexicana
ENSCSEG00000000690	-	100	61.423	ENSPREG00000020060	apobec2b	61	75.532	Poecilia_reticulata
ENSCSEG00000000690	-	69	57.068	ENSPPYG00000016586	APOBEC2	85	57.068	Pongo_abelii
ENSCSEG00000000690	-	69	58.115	ENSPCAG00000011433	APOBEC2	100	58.115	Procavia_capensis
ENSCSEG00000000690	-	69	57.592	ENSPCOG00000026935	APOBEC2	85	57.592	Propithecus_coquereli
ENSCSEG00000000690	-	69	57.068	ENSPVAG00000008316	APOBEC2	85	57.068	Pteropus_vampyrus
ENSCSEG00000000690	-	100	61.852	ENSPNYG00000016747	apobec2b	70	74.468	Pundamilia_nyererei
ENSCSEG00000000690	-	80	57.407	ENSPNAG00000013666	apobec2b	69	62.304	Pygocentrus_nattereri
ENSCSEG00000000690	-	100	48.519	ENSPNAG00000010382	apobec2a	71	59.574	Pygocentrus_nattereri
ENSCSEG00000000690	-	69	56.021	ENSRNOG00000012303	Apobec2	85	56.021	Rattus_norvegicus
ENSCSEG00000000690	-	69	57.592	ENSRBIG00000044756	APOBEC2	85	57.592	Rhinopithecus_bieti
ENSCSEG00000000690	-	69	57.592	ENSRROG00000030082	APOBEC2	85	57.592	Rhinopithecus_roxellana
ENSCSEG00000000690	-	69	57.592	ENSSBOG00000028496	APOBEC2	85	57.592	Saimiri_boliviensis_boliviensis
ENSCSEG00000000690	-	73	54.545	ENSSHAG00000017771	APOBEC2	86	57.068	Sarcophilus_harrisii
ENSCSEG00000000690	-	88	56.170	ENSSFOG00015022920	apobec2	68	63.830	Scleropages_formosus
ENSCSEG00000000690	-	63	52.663	ENSSFOG00015005437	-	71	52.663	Scleropages_formosus
ENSCSEG00000000690	-	73	76.804	ENSSMAG00000005110	APOBEC2	68	77.660	Scophthalmus_maximus
ENSCSEG00000000690	-	100	49.630	ENSSMAG00000001011	apobec2a	56	59.574	Scophthalmus_maximus
ENSCSEG00000000690	-	77	73.039	ENSSDUG00000014543	apobec2b	70	76.596	Seriola_dumerili
ENSCSEG00000000690	-	100	51.301	ENSSDUG00000007013	apobec2a	74	61.828	Seriola_dumerili
ENSCSEG00000000690	-	100	52.045	ENSSLDG00000020199	apobec2a	74	61.290	Seriola_lalandi_dorsalis
ENSCSEG00000000690	-	77	73.039	ENSSLDG00000003321	apobec2b	70	76.596	Seriola_lalandi_dorsalis
ENSCSEG00000000690	-	65	53.591	ENSSPUG00000010839	APOBEC2	87	53.591	Sphenodon_punctatus
ENSCSEG00000000690	-	91	50.407	ENSSPAG00000016299	-	77	56.383	Stegastes_partitus
ENSCSEG00000000690	-	100	62.963	ENSSPAG00000005253	apobec2b	70	76.596	Stegastes_partitus
ENSCSEG00000000690	-	69	56.545	ENSSSCG00000036018	APOBEC2	85	56.545	Sus_scrofa
ENSCSEG00000000690	-	69	57.895	ENSTGUG00000018533	APOBEC2	85	57.895	Taeniopygia_guttata
ENSCSEG00000000690	-	91	49.388	ENSTRUG00000009123	apobec2a	94	51.293	Takifugu_rubripes
ENSCSEG00000000690	-	100	59.925	ENSTRUG00000012839	apobec2b	72	71.277	Takifugu_rubripes
ENSCSEG00000000690	-	100	63.941	ENSTNIG00000015038	apobec2b	72	73.404	Tetraodon_nigroviridis
ENSCSEG00000000690	-	69	57.068	ENSTBEG00000003553	APOBEC2	85	57.068	Tupaia_belangeri
ENSCSEG00000000690	-	79	52.294	ENSTTRG00000013392	APOBEC2	85	55.263	Tursiops_truncatus
ENSCSEG00000000690	-	69	59.162	ENSUAMG00000027667	APOBEC2	84	59.162	Ursus_americanus
ENSCSEG00000000690	-	69	57.068	ENSVVUG00000026617	APOBEC2	85	57.068	Vulpes_vulpes
ENSCSEG00000000690	-	76	47.489	ENSXETG00000008007	apobec2	84	49.246	Xenopus_tropicalis
ENSCSEG00000000690	-	73	74.227	ENSXCOG00000007398	apobec2b	75	74.468	Xiphophorus_couchianus
ENSCSEG00000000690	-	73	74.227	ENSXMAG00000008134	apobec2b	70	74.468	Xiphophorus_maculatus