EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000000711 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4453 bases
Position: chr14:27314823-27319275
Accession: ZDB-GENE-060503-609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001018	Ribosomal_S18	PF01084.20	2.2e-20	1	1
ENSCSEP00000001025	Ribosomal_S18	PF01084.20	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001053	-	330	-	ENSCSEP00000001025	109 (aa)	-	-
ENSCSET00000001046	-	426	-	ENSCSEP00000001018	141 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000000711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000711's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000711	mrps18c	91	59.596	ENSAPOG00000019045	mrps18c	71	78.261	Acanthochromis_polyacanthus
ENSCSEG00000000711	mrps18c	90	56.122	ENSACIG00000020253	mrps18c	89	75.556	Amphilophus_citrinellus
ENSCSEG00000000711	mrps18c	91	60.606	ENSAOCG00000014338	mrps18c	71	79.348	Amphiprion_ocellaris
ENSCSEG00000000711	mrps18c	60	86.154	ENSAPEG00000023068	-	82	81.609	Amphiprion_percula
ENSCSEG00000000711	mrps18c	91	60.606	ENSAPEG00000022956	mrps18c	84	69.725	Amphiprion_percula
ENSCSEG00000000711	mrps18c	98	55.856	ENSATEG00000023417	mrps18c	72	74.468	Anabas_testudineus
ENSCSEG00000000711	mrps18c	62	70.455	ENSAPLG00000012544	-	85	70.455	Anas_platyrhynchos
ENSCSEG00000000711	mrps18c	91	61.616	ENSACLG00000010521	mrps18c	89	83.516	Astatotilapia_calliptera
ENSCSEG00000000711	mrps18c	91	56.566	ENSAMXG00000012238	mrps18c	90	75.281	Astyanax_mexicanus
ENSCSEG00000000711	mrps18c	59	70.312	ENSCPBG00000007783	-	54	67.045	Chrysemys_picta_bellii
ENSCSEG00000000711	mrps18c	91	57.576	ENSCVAG00000020169	mrps18c	75	72.632	Cyprinodon_variegatus
ENSCSEG00000000711	mrps18c	62	70.455	ENSDARG00000069624	mrps18c	65	70.455	Danio_rerio
ENSCSEG00000000711	mrps18c	91	51.515	ENSELUG00000024603	mrps18c	86	57.759	Esox_lucius
ENSCSEG00000000711	mrps18c	99	57.265	ENSFHEG00000018752	-	80	70.588	Fundulus_heteroclitus
ENSCSEG00000000711	mrps18c	99	57.265	ENSFHEG00000015550	mrps18c	76	70.588	Fundulus_heteroclitus
ENSCSEG00000000711	mrps18c	76	58.559	ENSGALG00000023191	MRPS18C	77	58.559	Gallus_gallus
ENSCSEG00000000711	mrps18c	72	68.627	ENSGAFG00000008048	mrps18c	66	68.627	Gambusia_affinis
ENSCSEG00000000711	mrps18c	80	55.556	ENSGAGG00000015144	-	82	55.556	Gopherus_agassizii
ENSCSEG00000000711	mrps18c	93	61.386	ENSHBUG00000002008	mrps18c	70	83.516	Haplochromis_burtoni
ENSCSEG00000000711	mrps18c	63	83.146	ENSHCOG00000013161	mrps18c	67	83.146	Hippocampus_comes
ENSCSEG00000000711	mrps18c	90	52.041	ENSIPUG00000003783	mrps18c	86	67.416	Ictalurus_punctatus
ENSCSEG00000000711	mrps18c	92	59.000	ENSKMAG00000016467	mrps18c	74	75.789	Kryptolebias_marmoratus
ENSCSEG00000000711	mrps18c	93	59.406	ENSLBEG00000021861	mrps18c	88	67.544	Labrus_bergylta
ENSCSEG00000000711	mrps18c	93	59.406	ENSLBEG00000019174	mrps18c	88	67.544	Labrus_bergylta
ENSCSEG00000000711	mrps18c	86	55.738	ENSLACG00000011243	mrps18c	95	55.738	Latimeria_chalumnae
ENSCSEG00000000711	mrps18c	63	68.539	ENSLOCG00000012115	mrps18c	66	68.539	Lepisosteus_oculatus
ENSCSEG00000000711	mrps18c	60	83.077	ENSMAMG00000012386	mrps18c	68	78.022	Mastacembelus_armatus
ENSCSEG00000000711	mrps18c	93	61.386	ENSMZEG00005023278	mrps18c	70	83.516	Maylandia_zebra
ENSCSEG00000000711	mrps18c	91	62.626	ENSMMOG00000011316	mrps18c	69	82.418	Mola_mola
ENSCSEG00000000711	mrps18c	93	61.386	ENSNBRG00000006182	mrps18c	70	83.516	Neolamprologus_brichardi
ENSCSEG00000000711	mrps18c	59	73.438	ENSMEUG00000010972	-	69	70.115	Notamacropus_eugenii
ENSCSEG00000000711	mrps18c	97	55.660	ENSONIG00000012527	mrps18c	90	81.319	Oreochromis_niloticus
ENSCSEG00000000711	mrps18c	92	60.000	ENSORLG00015006869	mrps18c	73	75.532	Oryzias_latipes_hsok
ENSCSEG00000000711	mrps18c	60	78.462	ENSOMEG00000005009	mrps18c	85	75.000	Oryzias_melastigma
ENSCSEG00000000711	mrps18c	92	53.077	ENSPKIG00000021736	mrps18c	95	53.077	Paramormyrops_kingsleyae
ENSCSEG00000000711	mrps18c	91	58.586	ENSPMGG00000002991	mrps18c	92	78.022	Periophthalmus_magnuspinnatus
ENSCSEG00000000711	mrps18c	72	67.647	ENSPFOG00000002351	mrps18c	66	67.647	Poecilia_formosa
ENSCSEG00000000711	mrps18c	67	71.579	ENSPLAG00000015187	mrps18c	74	71.579	Poecilia_latipinna
ENSCSEG00000000711	mrps18c	72	67.647	ENSPMEG00000014488	mrps18c	66	67.647	Poecilia_mexicana
ENSCSEG00000000711	mrps18c	60	78.462	ENSPREG00000012593	mrps18c	84	78.049	Poecilia_reticulata
ENSCSEG00000000711	mrps18c	93	60.396	ENSPNYG00000010654	mrps18c	70	82.418	Pundamilia_nyererei
ENSCSEG00000000711	mrps18c	92	51.000	ENSPNAG00000009350	mrps18c	83	67.416	Pygocentrus_nattereri
ENSCSEG00000000711	mrps18c	74	64.762	ENSSFOG00015019444	mrps18c	76	64.762	Scleropages_formosus
ENSCSEG00000000711	mrps18c	67	80.851	ENSSDUG00000015676	mrps18c	73	80.851	Seriola_dumerili
ENSCSEG00000000711	mrps18c	97	55.752	ENSSLDG00000002034	mrps18c	71	82.418	Seriola_lalandi_dorsalis
ENSCSEG00000000711	mrps18c	67	67.021	ENSSPUG00000013990	-	68	67.021	Sphenodon_punctatus
ENSCSEG00000000711	mrps18c	59	81.250	ENSSPAG00000008687	mrps18c	71	75.000	Stegastes_partitus
ENSCSEG00000000711	mrps18c	96	55.238	ENSTRUG00000024403	mrps18c	82	69.444	Takifugu_rubripes
ENSCSEG00000000711	mrps18c	93	55.446	ENSTNIG00000005674	mrps18c	78	71.569	Tetraodon_nigroviridis
ENSCSEG00000000711	mrps18c	60	64.706	ENSXETG00000027597	mrps18c	65	64.706	Xenopus_tropicalis
ENSCSEG00000000711	mrps18c	65	76.087	ENSXCOG00000016208	mrps18c	93	74.194	Xiphophorus_couchianus
ENSCSEG00000000711	mrps18c	72	70.588	ENSXMAG00000012555	mrps18c	66	70.588	Xiphophorus_maculatus