EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000000722 (Gene tree)
Gene ID: 103388071
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5238 bases
Position: chr13:3312543-3317780
Accession: 103388071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001028	zf-U11-48K	PF05253.12	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001056	-	2958	XM_008322929	ENSCSEP00000001028	348 (aa)	XP_008321151	UPI0004982B88

Gene Model

Click here to download ENSCSEG00000000722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000722's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000722	snrnp48	72	49.425	ENSG00000168566	SNRNP48	77	49.049	Homo_sapiens
ENSCSEG00000000722	snrnp48	90	68.966	ENSAPOG00000021430	snrnp48	78	73.106	Acanthochromis_polyacanthus
ENSCSEG00000000722	snrnp48	71	48.837	ENSAMEG00000017349	SNRNP48	74	48.837	Ailuropoda_melanoleuca
ENSCSEG00000000722	snrnp48	90	60.443	ENSACIG00000002032	snrnp48	94	60.312	Amphilophus_citrinellus
ENSCSEG00000000722	snrnp48	89	68.868	ENSAOCG00000010562	snrnp48	78	73.384	Amphiprion_ocellaris
ENSCSEG00000000722	snrnp48	89	68.868	ENSAPEG00000003231	snrnp48	77	73.384	Amphiprion_percula
ENSCSEG00000000722	snrnp48	86	71.287	ENSATEG00000020210	snrnp48	75	74.603	Anabas_testudineus
ENSCSEG00000000722	snrnp48	74	45.588	ENSACAG00000002811	SNRNP48	66	49.065	Anolis_carolinensis
ENSCSEG00000000722	snrnp48	72	49.808	ENSANAG00000033538	SNRNP48	76	49.808	Aotus_nancymaae
ENSCSEG00000000722	snrnp48	87	55.484	ENSAMXG00000015309	snrnp48	77	60.236	Astyanax_mexicanus
ENSCSEG00000000722	snrnp48	69	47.619	ENSBTAG00000001123	SNRNP48	76	47.529	Bos_taurus
ENSCSEG00000000722	snrnp48	71	49.421	ENSCJAG00000021330	SNRNP48	76	49.421	Callithrix_jacchus
ENSCSEG00000000722	snrnp48	72	47.510	ENSCAFG00000009574	SNRNP48	64	46.743	Canis_familiaris
ENSCSEG00000000722	snrnp48	72	47.510	ENSCAFG00020013203	SNRNP48	76	47.510	Canis_lupus_dingo
ENSCSEG00000000722	snrnp48	69	48.413	ENSCHIG00000015216	SNRNP48	76	48.289	Capra_hircus
ENSCSEG00000000722	snrnp48	79	47.552	ENSTSYG00000000698	SNRNP48	78	48.872	Carlito_syrichta
ENSCSEG00000000722	snrnp48	70	47.287	ENSCAPG00000006768	SNRNP48	70	51.852	Cavia_aperea
ENSCSEG00000000722	snrnp48	78	46.831	ENSCPOG00000007910	SNRNP48	78	47.940	Cavia_porcellus
ENSCSEG00000000722	snrnp48	71	48.450	ENSCCAG00000035652	SNRNP48	76	48.450	Cebus_capucinus
ENSCSEG00000000722	snrnp48	72	49.425	ENSCATG00000033947	SNRNP48	77	49.049	Cercocebus_atys
ENSCSEG00000000722	snrnp48	72	48.462	ENSCLAG00000003765	SNRNP48	76	48.106	Chinchilla_lanigera
ENSCSEG00000000722	snrnp48	72	50.192	ENSCSAG00000007409	SNRNP48	76	50.192	Chlorocebus_sabaeus
ENSCSEG00000000722	snrnp48	77	43.599	ENSCPBG00000019146	SNRNP48	69	48.430	Chrysemys_picta_bellii
ENSCSEG00000000722	snrnp48	72	49.808	ENSCANG00000030017	SNRNP48	77	49.430	Colobus_angolensis_palliatus
ENSCSEG00000000722	snrnp48	67	40.574	ENSCGRG00001008805	-	75	40.574	Cricetulus_griseus_chok1gshd
ENSCSEG00000000722	snrnp48	72	47.529	ENSCGRG00001001076	-	77	47.529	Cricetulus_griseus_chok1gshd
ENSCSEG00000000722	snrnp48	72	47.529	ENSCGRG00000007781	Snrnp48	77	47.529	Cricetulus_griseus_crigri
ENSCSEG00000000722	snrnp48	89	64.353	ENSCVAG00000019829	snrnp48	67	70.769	Cyprinodon_variegatus
ENSCSEG00000000722	snrnp48	78	55.235	ENSDARG00000039989	snrnp48	73	55.600	Danio_rerio
ENSCSEG00000000722	snrnp48	73	48.699	ENSDNOG00000014978	SNRNP48	91	38.889	Dasypus_novemcinctus
ENSCSEG00000000722	snrnp48	72	48.855	ENSDORG00000015140	Snrnp48	76	48.855	Dipodomys_ordii
ENSCSEG00000000722	snrnp48	72	49.049	ENSEASG00005012021	SNRNP48	77	49.049	Equus_asinus_asinus
ENSCSEG00000000722	snrnp48	72	49.049	ENSECAG00000026937	SNRNP48	77	49.049	Equus_caballus
ENSCSEG00000000722	snrnp48	71	32.946	ENSEEUG00000015437	SNRNP48	76	31.395	Erinaceus_europaeus
ENSCSEG00000000722	snrnp48	92	51.445	ENSELUG00000009766	snrnp48	96	52.299	Esox_lucius
ENSCSEG00000000722	snrnp48	78	46.099	ENSFCAG00000018853	SNRNP48	78	47.170	Felis_catus
ENSCSEG00000000722	snrnp48	66	52.340	ENSFALG00000007797	SNRNP48	68	53.488	Ficedula_albicollis
ENSCSEG00000000722	snrnp48	78	46.831	ENSFDAG00000009231	SNRNP48	77	48.669	Fukomys_damarensis
ENSCSEG00000000722	snrnp48	58	78.325	ENSFHEG00000014647	snrnp48	73	78.095	Fundulus_heteroclitus
ENSCSEG00000000722	snrnp48	68	65.126	ENSGMOG00000018599	-	80	63.636	Gadus_morhua
ENSCSEG00000000722	snrnp48	81	48.443	ENSGALG00000013005	SNRNP48	69	55.288	Gallus_gallus
ENSCSEG00000000722	snrnp48	76	67.910	ENSGAFG00000021639	snrnp48	75	69.531	Gambusia_affinis
ENSCSEG00000000722	snrnp48	69	72.016	ENSGACG00000017756	-	96	66.562	Gasterosteus_aculeatus
ENSCSEG00000000722	snrnp48	76	43.972	ENSGAGG00000000865	SNRNP48	71	48.636	Gopherus_agassizii
ENSCSEG00000000722	snrnp48	72	49.808	ENSGGOG00000013220	SNRNP48	77	49.430	Gorilla_gorilla
ENSCSEG00000000722	snrnp48	90	69.085	ENSHBUG00000017066	snrnp48	93	68.536	Haplochromis_burtoni
ENSCSEG00000000722	snrnp48	70	48.828	ENSHGLG00000015241	SNRNP48	75	48.828	Heterocephalus_glaber_female
ENSCSEG00000000722	snrnp48	70	48.828	ENSHGLG00100010027	SNRNP48	75	48.828	Heterocephalus_glaber_male
ENSCSEG00000000722	snrnp48	72	69.841	ENSHCOG00000014066	snrnp48	76	69.231	Hippocampus_comes
ENSCSEG00000000722	snrnp48	72	48.659	ENSSTOG00000014635	SNRNP48	77	48.289	Ictidomys_tridecemlineatus
ENSCSEG00000000722	snrnp48	70	48.617	ENSJJAG00000011495	Snrnp48	74	48.221	Jaculus_jaculus
ENSCSEG00000000722	snrnp48	91	67.391	ENSKMAG00000016514	snrnp48	96	65.964	Kryptolebias_marmoratus
ENSCSEG00000000722	snrnp48	78	74.170	ENSLBEG00000026249	snrnp48	96	70.988	Labrus_bergylta
ENSCSEG00000000722	snrnp48	91	45.536	ENSLACG00000003958	SNRNP48	75	50.584	Latimeria_chalumnae
ENSCSEG00000000722	snrnp48	78	56.115	ENSLOCG00000004187	snrnp48	77	56.757	Lepisosteus_oculatus
ENSCSEG00000000722	snrnp48	72	47.388	ENSLAFG00000011152	SNRNP48	77	47.348	Loxodonta_africana
ENSCSEG00000000722	snrnp48	72	49.808	ENSMFAG00000045216	SNRNP48	77	49.430	Macaca_fascicularis
ENSCSEG00000000722	snrnp48	72	49.808	ENSMMUG00000014785	SNRNP48	77	49.430	Macaca_mulatta
ENSCSEG00000000722	snrnp48	72	49.808	ENSMNEG00000042269	SNRNP48	76	49.808	Macaca_nemestrina
ENSCSEG00000000722	snrnp48	72	49.808	ENSMLEG00000034004	SNRNP48	77	49.430	Mandrillus_leucophaeus
ENSCSEG00000000722	snrnp48	88	68.831	ENSMAMG00000018673	snrnp48	65	73.896	Mastacembelus_armatus
ENSCSEG00000000722	snrnp48	74	48.913	ENSMGAG00000006037	SNRNP48	69	55.556	Meleagris_gallopavo
ENSCSEG00000000722	snrnp48	91	31.378	ENSMAUG00000011944	Snrnp48	77	47.328	Mesocricetus_auratus
ENSCSEG00000000722	snrnp48	72	49.242	ENSMICG00000012497	SNRNP48	77	49.242	Microcebus_murinus
ENSCSEG00000000722	snrnp48	91	32.164	ENSMOCG00000015555	Snrnp48	77	47.909	Microtus_ochrogaster
ENSCSEG00000000722	snrnp48	55	75.773	ENSMMOG00000003072	-	61	75.773	Mola_mola
ENSCSEG00000000722	snrnp48	78	45.614	ENSMODG00000009996	SNRNP48	70	46.923	Monodelphis_domestica
ENSCSEG00000000722	snrnp48	89	71.521	ENSMALG00000005725	snrnp48	93	71.154	Monopterus_albus
ENSCSEG00000000722	snrnp48	95	41.176	MGP_CAROLIEiJ_G0018441	Snrnp48	75	48.438	Mus_caroli
ENSCSEG00000000722	snrnp48	70	48.438	ENSMUSG00000021431	Snrnp48	75	48.438	Mus_musculus
ENSCSEG00000000722	snrnp48	95	42.229	MGP_PahariEiJ_G0019509	Snrnp48	89	43.522	Mus_pahari
ENSCSEG00000000722	snrnp48	70	48.438	MGP_SPRETEiJ_G0019321	Snrnp48	75	48.438	Mus_spretus
ENSCSEG00000000722	snrnp48	72	50.190	ENSNGAG00000004849	Snrnp48	77	50.190	Nannospalax_galili
ENSCSEG00000000722	snrnp48	90	68.770	ENSNBRG00000012127	snrnp48	94	68.224	Neolamprologus_brichardi
ENSCSEG00000000722	snrnp48	72	49.808	ENSNLEG00000011667	SNRNP48	77	49.430	Nomascus_leucogenys
ENSCSEG00000000722	snrnp48	70	48.016	ENSOPRG00000015471	SNRNP48	78	48.016	Ochotona_princeps
ENSCSEG00000000722	snrnp48	90	69.716	ENSONIG00000001520	snrnp48	94	69.159	Oreochromis_niloticus
ENSCSEG00000000722	snrnp48	53	36.538	ENSOANG00000019888	-	97	36.765	Ornithorhynchus_anatinus
ENSCSEG00000000722	snrnp48	74	47.037	ENSOCUG00000005168	SNRNP48	85	48.659	Oryctolagus_cuniculus
ENSCSEG00000000722	snrnp48	84	68.456	ENSORLG00000015654	snrnp48	77	70.412	Oryzias_latipes
ENSCSEG00000000722	snrnp48	84	67.003	ENSORLG00020015976	snrnp48	66	70.412	Oryzias_latipes_hni
ENSCSEG00000000722	snrnp48	84	65.993	ENSORLG00015022379	snrnp48	66	69.288	Oryzias_latipes_hsok
ENSCSEG00000000722	snrnp48	79	69.784	ENSOMEG00000022007	snrnp48	75	70.703	Oryzias_melastigma
ENSCSEG00000000722	snrnp48	91	41.441	ENSOGAG00000005275	SNRNP48	96	41.945	Otolemur_garnettii
ENSCSEG00000000722	snrnp48	59	51.196	ENSOARG00000017319	SNRNP48	72	51.196	Ovis_aries
ENSCSEG00000000722	snrnp48	72	49.808	ENSPPAG00000032873	SNRNP48	77	49.430	Pan_paniscus
ENSCSEG00000000722	snrnp48	78	46.127	ENSPPRG00000004283	SNRNP48	78	47.191	Panthera_pardus
ENSCSEG00000000722	snrnp48	66	48.927	ENSPTIG00000013502	SNRNP48	75	50.463	Panthera_tigris_altaica
ENSCSEG00000000722	snrnp48	72	49.808	ENSPTRG00000017703	SNRNP48	77	49.430	Pan_troglodytes
ENSCSEG00000000722	snrnp48	72	49.808	ENSPANG00000000771	SNRNP48	77	49.430	Papio_anubis
ENSCSEG00000000722	snrnp48	76	57.875	ENSPKIG00000013703	snrnp48	55	57.692	Paramormyrops_kingsleyae
ENSCSEG00000000722	snrnp48	77	43.206	ENSPSIG00000002213	SNRNP48	68	49.537	Pelodiscus_sinensis
ENSCSEG00000000722	snrnp48	71	66.279	ENSPMGG00000008120	snrnp48	91	66.279	Periophthalmus_magnuspinnatus
ENSCSEG00000000722	snrnp48	72	48.669	ENSPEMG00000008872	Snrnp48	77	48.669	Peromyscus_maniculatus_bairdii
ENSCSEG00000000722	snrnp48	76	69.030	ENSPFOG00000003578	snrnp48	75	70.703	Poecilia_formosa
ENSCSEG00000000722	snrnp48	64	70.485	ENSPLAG00000002290	snrnp48	78	70.485	Poecilia_latipinna
ENSCSEG00000000722	snrnp48	76	69.030	ENSPMEG00000018033	snrnp48	75	70.703	Poecilia_mexicana
ENSCSEG00000000722	snrnp48	90	62.928	ENSPREG00000018541	snrnp48	94	64.486	Poecilia_reticulata
ENSCSEG00000000722	snrnp48	72	49.808	ENSPPYG00000016209	SNRNP48	76	49.808	Pongo_abelii
ENSCSEG00000000722	snrnp48	69	36.800	ENSPCAG00000011991	SNRNP48	97	37.931	Procavia_capensis
ENSCSEG00000000722	snrnp48	72	48.846	ENSPVAG00000002854	SNRNP48	76	48.846	Pteropus_vampyrus
ENSCSEG00000000722	snrnp48	89	69.231	ENSPNYG00000015399	snrnp48	84	73.664	Pundamilia_nyererei
ENSCSEG00000000722	snrnp48	72	49.430	ENSRNOG00000013756	Snrnp48	77	49.430	Rattus_norvegicus
ENSCSEG00000000722	snrnp48	72	49.808	ENSRBIG00000043856	SNRNP48	82	49.808	Rhinopithecus_bieti
ENSCSEG00000000722	snrnp48	72	49.808	ENSRROG00000043229	SNRNP48	77	49.430	Rhinopithecus_roxellana
ENSCSEG00000000722	snrnp48	72	50.192	ENSSBOG00000019486	SNRNP48	76	50.192	Saimiri_boliviensis_boliviensis
ENSCSEG00000000722	snrnp48	78	44.251	ENSSHAG00000014483	SNRNP48	75	45.420	Sarcophilus_harrisii
ENSCSEG00000000722	snrnp48	68	57.490	ENSSFOG00015006610	snrnp48	60	57.874	Scleropages_formosus
ENSCSEG00000000722	snrnp48	88	70.779	ENSSDUG00000014953	snrnp48	93	69.010	Seriola_dumerili
ENSCSEG00000000722	snrnp48	88	70.000	ENSSLDG00000005989	snrnp48	93	68.254	Seriola_lalandi_dorsalis
ENSCSEG00000000722	snrnp48	75	46.182	ENSSPUG00000006257	SNRNP48	63	49.776	Sphenodon_punctatus
ENSCSEG00000000722	snrnp48	92	69.969	ENSSPAG00000006454	snrnp48	96	69.018	Stegastes_partitus
ENSCSEG00000000722	snrnp48	74	47.985	ENSTGUG00000007575	SNRNP48	65	54.854	Taeniopygia_guttata
ENSCSEG00000000722	snrnp48	72	69.804	ENSTRUG00000007031	snrnp48	88	66.107	Takifugu_rubripes
ENSCSEG00000000722	snrnp48	94	62.651	ENSTNIG00000012977	-	72	71.548	Tetraodon_nigroviridis
ENSCSEG00000000722	snrnp48	72	48.077	ENSTBEG00000015620	SNRNP48	76	48.077	Tupaia_belangeri
ENSCSEG00000000722	snrnp48	67	48.361	ENSTTRG00000016715	SNRNP48	74	48.235	Tursiops_truncatus
ENSCSEG00000000722	snrnp48	78	46.619	ENSUAMG00000003690	SNRNP48	78	47.727	Ursus_americanus
ENSCSEG00000000722	snrnp48	60	52.358	ENSVPAG00000003557	SNRNP48	73	52.358	Vicugna_pacos
ENSCSEG00000000722	snrnp48	86	43.871	ENSVVUG00000004996	SNRNP48	77	46.792	Vulpes_vulpes
ENSCSEG00000000722	snrnp48	95	41.369	ENSXETG00000020447	snrnp48	89	42.633	Xenopus_tropicalis
ENSCSEG00000000722	snrnp48	90	58.675	ENSXCOG00000004478	snrnp48	93	57.944	Xiphophorus_couchianus
ENSCSEG00000000722	snrnp48	90	63.551	ENSXMAG00000013595	snrnp48	94	65.109	Xiphophorus_maculatus