EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000000822 (Gene tree)
Gene ID: 103389222
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 11111 bases
Position: chr14:4212147-4223257
Accession: 103389222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001195	KH_1	PF00013.29	9.7e-50	1	3
ENSCSEP00000001195	KH_1	PF00013.29	9.7e-50	2	3
ENSCSEP00000001195	KH_1	PF00013.29	9.7e-50	3	3
ENSCSEP00000001184	KH_1	PF00013.29	6.4e-35	1	2
ENSCSEP00000001184	KH_1	PF00013.29	6.4e-35	2	2
ENSCSEP00000001195	KH_2	PF07650.17	1.3e-11	1	1
ENSCSEP00000001184	KH_2	PF07650.17	6.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001213	-	1318	-	ENSCSEP00000001184	243 (aa)	-	-
ENSCSET00000001224	-	918	XM_008324545	ENSCSEP00000001195	305 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000000822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000822's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000000822	pcbp3	73	49.315	ENSCSEG00000012457	hnrnpk	58	49.315
ENSCSEG00000000822	pcbp3	69	30.556	ENSCSEG00000012106	igf2bp3	53	30.556
ENSCSEG00000000822	pcbp3	99	78.659	ENSCSEG00000016984	-	97	78.659
ENSCSEG00000000822	pcbp3	91	38.806	ENSCSEG00000005887	NOVA1	52	38.806
ENSCSEG00000000822	pcbp3	87	35.714	ENSCSEG00000013968	igf2bp1	54	35.714
ENSCSEG00000000822	pcbp3	96	71.661	ENSCSEG00000010020	zgc:110045	94	71.661
ENSCSEG00000000822	pcbp3	74	37.500	ENSCSEG00000021412	fubp1	52	37.500
ENSCSEG00000000822	pcbp3	96	73.333	ENSCSEG00000021490	pcbp2	94	73.333
ENSCSEG00000000822	pcbp3	96	55.660	ENSCSEG00000021041	PCBP4	71	55.660
ENSCSEG00000000822	pcbp3	87	45.283	ENSCSEG00000011718	igf2bp2b	57	45.283
ENSCSEG00000000822	pcbp3	91	40.299	ENSCSEG00000017718	nova1	54	38.596
ENSCSEG00000000822	pcbp3	70	36.585	ENSCSEG00000008761	-	59	36.585
ENSCSEG00000000822	pcbp3	96	74.516	ENSCSEG00000010540	PCBP2	95	74.516
ENSCSEG00000000822	pcbp3	68	42.188	ENSCSEG00000011429	khsrp	55	42.188
ENSCSEG00000000822	pcbp3	96	59.939	ENSCSEG00000014487	pcbp4	65	59.939
ENSCSEG00000000822	pcbp3	91	38.462	ENSCSEG00000017815	FUBP3	79	38.710
ENSCSEG00000000822	pcbp3	70	55.556	ENSCSEG00000001024	hnrpkl	51	36.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000822	pcbp3	100	97.377	ENSAPOG00000020003	pcbp3	87	97.377	Acanthochromis_polyacanthus
ENSCSEG00000000822	pcbp3	99	93.548	ENSAPOG00000016582	-	97	92.652	Acanthochromis_polyacanthus
ENSCSEG00000000822	pcbp3	97	86.957	ENSAMEG00000001697	-	95	82.789	Ailuropoda_melanoleuca
ENSCSEG00000000822	pcbp3	99	90.214	ENSACIG00000010933	pcbp3	95	90.214	Amphilophus_citrinellus
ENSCSEG00000000822	pcbp3	99	92.038	ENSACIG00000002739	-	97	92.038	Amphilophus_citrinellus
ENSCSEG00000000822	pcbp3	89	91.844	ENSAOCG00000007806	-	96	91.844	Amphiprion_ocellaris
ENSCSEG00000000822	pcbp3	99	95.192	ENSAOCG00000008592	-	98	95.192	Amphiprion_ocellaris
ENSCSEG00000000822	pcbp3	99	94.156	ENSAPEG00000005209	-	97	94.156	Amphiprion_percula
ENSCSEG00000000822	pcbp3	99	88.358	ENSAPEG00000008011	pcbp3	95	88.358	Amphiprion_percula
ENSCSEG00000000822	pcbp3	99	91.077	ENSATEG00000015787	-	100	91.077	Anabas_testudineus
ENSCSEG00000000822	pcbp3	99	95.082	ENSATEG00000009833	-	97	95.082	Anabas_testudineus
ENSCSEG00000000822	pcbp3	97	88.328	ENSAPLG00000002975	-	95	88.328	Anas_platyrhynchos
ENSCSEG00000000822	pcbp3	87	86.730	ENSAPLG00000008951	-	78	74.571	Anas_platyrhynchos
ENSCSEG00000000822	pcbp3	87	94.787	ENSACAG00000004607	-	96	81.214	Anolis_carolinensis
ENSCSEG00000000822	pcbp3	97	80.675	ENSACAG00000009819	-	94	80.675	Anolis_carolinensis
ENSCSEG00000000822	pcbp3	90	86.093	ENSANAG00000030702	-	95	94.273	Aotus_nancymaae
ENSCSEG00000000822	pcbp3	99	88.060	ENSACLG00000011835	pcbp3	95	88.060	Astatotilapia_calliptera
ENSCSEG00000000822	pcbp3	99	95.364	ENSACLG00000003801	-	96	95.364	Astatotilapia_calliptera
ENSCSEG00000000822	pcbp3	96	69.062	ENSAMXG00000001760	zgc:110045	72	69.062	Astyanax_mexicanus
ENSCSEG00000000822	pcbp3	99	94.702	ENSAMXG00000013588	-	100	94.702	Astyanax_mexicanus
ENSCSEG00000000822	pcbp3	99	87.387	ENSAMXG00000003440	pcbp3	95	87.387	Astyanax_mexicanus
ENSCSEG00000000822	pcbp3	91	91.266	ENSCAFG00020019472	-	81	91.266	Canis_lupus_dingo
ENSCSEG00000000822	pcbp3	97	92.409	ENSCSAG00000007440	-	86	92.409	Chlorocebus_sabaeus
ENSCSEG00000000822	pcbp3	96	80.308	ENSCPBG00000000733	-	72	80.308	Chrysemys_picta_bellii
ENSCSEG00000000822	pcbp3	97	92.739	ENSCPBG00000012151	-	90	92.739	Chrysemys_picta_bellii
ENSCSEG00000000822	pcbp3	99	93.831	ENSCVAG00000005262	-	97	93.831	Cyprinodon_variegatus
ENSCSEG00000000822	pcbp3	90	97.248	ENSCVAG00000014482	pcbp3	95	88.060	Cyprinodon_variegatus
ENSCSEG00000000822	pcbp3	93	93.833	ENSDARG00000054378	pcbp3	94	93.833	Danio_rerio
ENSCSEG00000000822	pcbp3	97	80.198	ENSETEG00000015988	-	95	80.198	Echinops_telfairi
ENSCSEG00000000822	pcbp3	87	74.349	ENSEBUG00000016192	pcbp3	99	74.349	Eptatretus_burgeri
ENSCSEG00000000822	pcbp3	90	70.925	ENSEBUG00000005495	pcbp3	69	70.130	Eptatretus_burgeri
ENSCSEG00000000822	pcbp3	98	76.452	ENSEBUG00000007485	-	94	75.446	Eptatretus_burgeri
ENSCSEG00000000822	pcbp3	99	90.228	ENSELUG00000003521	pcbp3	97	90.228	Esox_lucius
ENSCSEG00000000822	pcbp3	99	93.226	ENSELUG00000001560	-	96	84.866	Esox_lucius
ENSCSEG00000000822	pcbp3	87	87.204	ENSFALG00000004411	-	74	74.857	Ficedula_albicollis
ENSCSEG00000000822	pcbp3	97	92.079	ENSFALG00000003949	-	95	92.079	Ficedula_albicollis
ENSCSEG00000000822	pcbp3	99	94.156	ENSFHEG00000006539	-	97	94.156	Fundulus_heteroclitus
ENSCSEG00000000822	pcbp3	99	97.682	ENSFHEG00000016615	pcbp3	95	97.682	Fundulus_heteroclitus
ENSCSEG00000000822	pcbp3	98	69.605	ENSGMOG00000008611	-	99	69.605	Gadus_morhua
ENSCSEG00000000822	pcbp3	99	78.679	ENSGMOG00000011992	pcbp3	96	78.743	Gadus_morhua
ENSCSEG00000000822	pcbp3	99	81.231	ENSGALG00000013155	-	99	81.231	Gallus_gallus
ENSCSEG00000000822	pcbp3	93	86.344	ENSGALG00000004394	-	98	86.957	Gallus_gallus
ENSCSEG00000000822	pcbp3	99	93.226	ENSGAFG00000010274	-	95	93.226	Gambusia_affinis
ENSCSEG00000000822	pcbp3	99	87.952	ENSGAFG00000011430	pcbp3	96	87.952	Gambusia_affinis
ENSCSEG00000000822	pcbp3	99	78.470	ENSGACG00000014955	-	97	78.470	Gasterosteus_aculeatus
ENSCSEG00000000822	pcbp3	100	86.145	ENSGACG00000002266	-	97	86.145	Gasterosteus_aculeatus
ENSCSEG00000000822	pcbp3	88	88.015	ENSGAGG00000000271	-	100	88.015	Gopherus_agassizii
ENSCSEG00000000822	pcbp3	88	86.512	ENSGAGG00000006956	-	87	86.512	Gopherus_agassizii
ENSCSEG00000000822	pcbp3	99	95.364	ENSHBUG00000021782	-	96	95.364	Haplochromis_burtoni
ENSCSEG00000000822	pcbp3	100	94.569	ENSHBUG00000010697	pcbp3	99	94.569	Haplochromis_burtoni
ENSCSEG00000000822	pcbp3	99	88.323	ENSHCOG00000017868	pcbp3	95	88.323	Hippocampus_comes
ENSCSEG00000000822	pcbp3	99	88.710	ENSHCOG00000006067	-	93	95.431	Hippocampus_comes
ENSCSEG00000000822	pcbp3	99	96.358	ENSIPUG00000006238	pcbp3	96	96.358	Ictalurus_punctatus
ENSCSEG00000000822	pcbp3	99	92.258	ENSKMAG00000018530	-	95	92.258	Kryptolebias_marmoratus
ENSCSEG00000000822	pcbp3	95	93.103	ENSKMAG00000003046	pcbp3	95	88.657	Kryptolebias_marmoratus
ENSCSEG00000000822	pcbp3	99	96.393	ENSLBEG00000006201	pcbp3	95	96.393	Labrus_bergylta
ENSCSEG00000000822	pcbp3	99	79.808	ENSLBEG00000006542	-	96	79.808	Labrus_bergylta
ENSCSEG00000000822	pcbp3	90	94.037	ENSLACG00000010386	pcbp3	74	79.437	Latimeria_chalumnae
ENSCSEG00000000822	pcbp3	87	85.308	ENSLACG00000010804	zgc:110045	73	74.928	Latimeria_chalumnae
ENSCSEG00000000822	pcbp3	97	86.997	ENSLOCG00000009369	pcbp3	95	86.997	Lepisosteus_oculatus
ENSCSEG00000000822	pcbp3	96	79.692	ENSLOCG00000005058	zgc:110045	79	79.692	Lepisosteus_oculatus
ENSCSEG00000000822	pcbp3	99	97.368	ENSMAMG00000022336	pcbp3	94	97.368	Mastacembelus_armatus
ENSCSEG00000000822	pcbp3	99	93.770	ENSMAMG00000011620	-	97	93.770	Mastacembelus_armatus
ENSCSEG00000000822	pcbp3	99	88.589	ENSMZEG00005008993	pcbp3	98	89.030	Maylandia_zebra
ENSCSEG00000000822	pcbp3	99	87.540	ENSMZEG00005014882	-	95	88.179	Maylandia_zebra
ENSCSEG00000000822	pcbp3	87	87.204	ENSMGAG00000006794	-	74	74.857	Meleagris_gallopavo
ENSCSEG00000000822	pcbp3	97	77.391	ENSMGAG00000001883	-	95	77.681	Meleagris_gallopavo
ENSCSEG00000000822	pcbp3	99	92.675	ENSMMOG00000000730	pcbp3	88	92.675	Mola_mola
ENSCSEG00000000822	pcbp3	99	95.364	ENSMMOG00000005216	-	96	95.364	Mola_mola
ENSCSEG00000000822	pcbp3	75	74.537	ENSMODG00000027884	-	94	74.537	Monodelphis_domestica
ENSCSEG00000000822	pcbp3	100	89.970	ENSMALG00000000691	pcbp3	93	93.583	Monopterus_albus
ENSCSEG00000000822	pcbp3	99	83.283	ENSMPUG00000001779	-	89	83.283	Mustela_putorius_furo
ENSCSEG00000000822	pcbp3	99	88.179	ENSNBRG00000016714	-	95	88.179	Neolamprologus_brichardi
ENSCSEG00000000822	pcbp3	99	90.462	ENSNBRG00000016409	-	95	90.462	Neolamprologus_brichardi
ENSCSEG00000000822	pcbp3	93	86.344	ENSOPRG00000003431	-	99	81.176	Ochotona_princeps
ENSCSEG00000000822	pcbp3	90	96.789	ENSONIG00000012122	-	98	83.146	Oreochromis_niloticus
ENSCSEG00000000822	pcbp3	99	92.903	ENSONIG00000004611	-	97	92.903	Oreochromis_niloticus
ENSCSEG00000000822	pcbp3	97	91.749	ENSOCUG00000002696	-	86	91.749	Oryctolagus_cuniculus
ENSCSEG00000000822	pcbp3	99	95.484	ENSORLG00000000059	pcbp3	100	95.484	Oryzias_latipes
ENSCSEG00000000822	pcbp3	99	93.548	ENSORLG00000022739	-	97	93.548	Oryzias_latipes
ENSCSEG00000000822	pcbp3	99	95.484	ENSORLG00020012671	pcbp3	97	95.484	Oryzias_latipes_hni
ENSCSEG00000000822	pcbp3	99	95.695	ENSORLG00020006124	-	96	95.695	Oryzias_latipes_hni
ENSCSEG00000000822	pcbp3	99	93.548	ENSORLG00015008051	-	95	93.548	Oryzias_latipes_hsok
ENSCSEG00000000822	pcbp3	99	95.484	ENSORLG00015000429	pcbp3	97	95.484	Oryzias_latipes_hsok
ENSCSEG00000000822	pcbp3	99	96.358	ENSOMEG00000020162	-	96	96.358	Oryzias_melastigma
ENSCSEG00000000822	pcbp3	91	98.201	ENSOMEG00000020811	pcbp3	96	98.201	Oryzias_melastigma
ENSCSEG00000000822	pcbp3	97	79.370	ENSOGAG00000008044	-	96	79.370	Otolemur_garnettii
ENSCSEG00000000822	pcbp3	99	94.408	ENSPKIG00000019329	pcbp3	97	94.408	Paramormyrops_kingsleyae
ENSCSEG00000000822	pcbp3	88	78.873	ENSPKIG00000020913	-	92	78.873	Paramormyrops_kingsleyae
ENSCSEG00000000822	pcbp3	79	84.615	ENSPSIG00000008350	-	67	80.328	Pelodiscus_sinensis
ENSCSEG00000000822	pcbp3	97	78.750	ENSPSIG00000014970	-	95	79.375	Pelodiscus_sinensis
ENSCSEG00000000822	pcbp3	100	87.798	ENSPMGG00000022383	pcbp3	96	87.798	Periophthalmus_magnuspinnatus
ENSCSEG00000000822	pcbp3	97	71.521	ENSPMAG00000004551	pcbp3	88	71.521	Petromyzon_marinus
ENSCSEG00000000822	pcbp3	77	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSCSEG00000000822	pcbp3	97	85.890	ENSPCIG00000028092	-	96	85.714	Phascolarctos_cinereus
ENSCSEG00000000822	pcbp3	98	91.961	ENSPLAG00000004074	-	89	91.961	Poecilia_latipinna
ENSCSEG00000000822	pcbp3	99	83.862	ENSPLAG00000011449	pcbp3	88	83.862	Poecilia_latipinna
ENSCSEG00000000822	pcbp3	100	87.059	ENSPMEG00000021239	pcbp3	98	87.554	Poecilia_mexicana
ENSCSEG00000000822	pcbp3	99	88.710	ENSPMEG00000006653	-	96	88.615	Poecilia_mexicana
ENSCSEG00000000822	pcbp3	99	95.695	ENSPREG00000020585	-	96	95.695	Poecilia_reticulata
ENSCSEG00000000822	pcbp3	99	95.425	ENSPREG00000015736	pcbp3	100	95.425	Poecilia_reticulata
ENSCSEG00000000822	pcbp3	99	95.364	ENSPNYG00000013205	-	96	95.364	Pundamilia_nyererei
ENSCSEG00000000822	pcbp3	100	94.888	ENSPNYG00000012326	pcbp3	96	94.888	Pundamilia_nyererei
ENSCSEG00000000822	pcbp3	98	94.667	ENSPNAG00000008541	-	98	94.667	Pygocentrus_nattereri
ENSCSEG00000000822	pcbp3	99	93.871	ENSPNAG00000015104	pcbp3	97	93.871	Pygocentrus_nattereri
ENSCSEG00000000822	pcbp3	97	92.409	ENSRNOG00000001245	Pcbp3	95	92.409	Rattus_norvegicus
ENSCSEG00000000822	pcbp3	99	82.298	ENSRBIG00000028177	-	89	82.298	Rhinopithecus_bieti
ENSCSEG00000000822	pcbp3	97	86.378	ENSSHAG00000007890	-	95	86.378	Sarcophilus_harrisii
ENSCSEG00000000822	pcbp3	99	93.226	ENSSFOG00015010205	pcbp3	95	93.226	Scleropages_formosus
ENSCSEG00000000822	pcbp3	96	89.316	ENSSFOG00015014706	pcbp3	95	85.886	Scleropages_formosus
ENSCSEG00000000822	pcbp3	97	84.437	ENSSFOG00015007118	-	93	84.437	Scleropages_formosus
ENSCSEG00000000822	pcbp3	99	93.485	ENSSMAG00000003135	-	97	93.485	Scophthalmus_maximus
ENSCSEG00000000822	pcbp3	99	98.020	ENSSMAG00000011929	pcbp3	98	98.020	Scophthalmus_maximus
ENSCSEG00000000822	pcbp3	99	90.244	ENSSDUG00000011608	pcbp3	99	90.244	Seriola_dumerili
ENSCSEG00000000822	pcbp3	99	89.677	ENSSDUG00000008502	-	95	89.677	Seriola_dumerili
ENSCSEG00000000822	pcbp3	99	93.548	ENSSLDG00000020161	-	95	93.548	Seriola_lalandi_dorsalis
ENSCSEG00000000822	pcbp3	99	90.244	ENSSLDG00000008518	pcbp3	99	90.244	Seriola_lalandi_dorsalis
ENSCSEG00000000822	pcbp3	96	76.023	ENSSPUG00000013214	-	90	83.756	Sphenodon_punctatus
ENSCSEG00000000822	pcbp3	89	91.844	ENSSPAG00000004190	-	96	91.844	Stegastes_partitus
ENSCSEG00000000822	pcbp3	99	77.879	ENSSPAG00000023341	-	95	77.879	Stegastes_partitus
ENSCSEG00000000822	pcbp3	97	86.799	ENSTGUG00000008158	-	95	86.799	Taeniopygia_guttata
ENSCSEG00000000822	pcbp3	97	84.520	ENSTGUG00000003316	-	95	84.520	Taeniopygia_guttata
ENSCSEG00000000822	pcbp3	99	91.615	ENSTRUG00000013604	pcbp3	99	89.778	Takifugu_rubripes
ENSCSEG00000000822	pcbp3	98	90.000	ENSTRUG00000006280	-	96	90.000	Takifugu_rubripes
ENSCSEG00000000822	pcbp3	97	79.769	ENSTTRG00000015075	-	96	79.769	Tursiops_truncatus
ENSCSEG00000000822	pcbp3	84	85.787	ENSXETG00000010491	pcbp2	72	75.153	Xenopus_tropicalis
ENSCSEG00000000822	pcbp3	97	86.068	ENSXETG00000011483	pcbp1	95	86.068	Xenopus_tropicalis
ENSCSEG00000000822	pcbp3	100	87.059	ENSXCOG00000020481	pcbp3	96	87.059	Xiphophorus_couchianus
ENSCSEG00000000822	pcbp3	99	88.358	ENSXMAG00000008175	pcbp3	95	88.358	Xiphophorus_maculatus
ENSCSEG00000000822	pcbp3	99	93.548	ENSXMAG00000028711	-	95	93.548	Xiphophorus_maculatus