EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000000856 (Gene tree)
Gene ID: 103386907
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 33910 bases
Position: chr12:909597-943506
Accession: 103386907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001237	S1	PF00575.23	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001266	-	6229	XM_008321336	ENSCSEP00000001237	997 (aa)	XP_008319558	UPI000496F7FB

Gene Model

Click here to download ENSCSEG00000000856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000856	si:ch211-117n7.8	87	55.305	ENSG00000068784	SRBD1	99	50.639	Homo_sapiens
ENSCSEG00000000856	si:ch211-117n7.8	100	73.142	ENSAPOG00000005103	si:ch211-117n7.8	100	73.142	Acanthochromis_polyacanthus
ENSCSEG00000000856	si:ch211-117n7.8	97	51.527	ENSAMEG00000005993	SRBD1	100	50.689	Ailuropoda_melanoleuca
ENSCSEG00000000856	si:ch211-117n7.8	97	72.599	ENSACIG00000009875	si:ch211-117n7.8	100	73.058	Amphilophus_citrinellus
ENSCSEG00000000856	si:ch211-117n7.8	100	73.553	ENSAOCG00000024718	si:ch211-117n7.8	100	73.653	Amphiprion_ocellaris
ENSCSEG00000000856	si:ch211-117n7.8	97	74.335	ENSAPEG00000002645	si:ch211-117n7.8	99	74.233	Amphiprion_percula
ENSCSEG00000000856	si:ch211-117n7.8	100	72.989	ENSATEG00000010844	si:ch211-117n7.8	100	72.944	Anabas_testudineus
ENSCSEG00000000856	si:ch211-117n7.8	84	58.186	ENSAPLG00000006313	SRBD1	99	52.106	Anas_platyrhynchos
ENSCSEG00000000856	si:ch211-117n7.8	97	51.521	ENSANAG00000025573	SRBD1	100	50.588	Aotus_nancymaae
ENSCSEG00000000856	si:ch211-117n7.8	100	72.390	ENSACLG00000024219	si:ch211-117n7.8	100	72.390	Astatotilapia_calliptera
ENSCSEG00000000856	si:ch211-117n7.8	99	62.363	ENSAMXG00000004294	SRBD1	99	62.463	Astyanax_mexicanus
ENSCSEG00000000856	si:ch211-117n7.8	84	57.327	ENSBTAG00000007508	SRBD1	81	57.210	Bos_taurus
ENSCSEG00000000856	si:ch211-117n7.8	97	51.217	ENSCJAG00000000727	SRBD1	100	50.294	Callithrix_jacchus
ENSCSEG00000000856	si:ch211-117n7.8	84	56.909	ENSCAFG00000002554	SRBD1	100	51.373	Canis_familiaris
ENSCSEG00000000856	si:ch211-117n7.8	84	57.706	ENSCAFG00020026284	SRBD1	97	57.587	Canis_lupus_dingo
ENSCSEG00000000856	si:ch211-117n7.8	85	57.193	ENSCHIG00000016535	SRBD1	83	57.077	Capra_hircus
ENSCSEG00000000856	si:ch211-117n7.8	84	56.876	ENSTSYG00000012797	SRBD1	84	56.760	Carlito_syrichta
ENSCSEG00000000856	si:ch211-117n7.8	86	56.279	ENSCPOG00000004773	SRBD1	86	56.163	Cavia_porcellus
ENSCSEG00000000856	si:ch211-117n7.8	87	55.418	ENSCCAG00000025589	SRBD1	100	50.980	Cebus_capucinus
ENSCSEG00000000856	si:ch211-117n7.8	97	51.472	ENSCATG00000039530	SRBD1	97	51.414	Cercocebus_atys
ENSCSEG00000000856	si:ch211-117n7.8	85	57.597	ENSCLAG00000008623	SRBD1	85	57.479	Chinchilla_lanigera
ENSCSEG00000000856	si:ch211-117n7.8	97	51.521	ENSCSAG00000013350	SRBD1	97	51.463	Chlorocebus_sabaeus
ENSCSEG00000000856	si:ch211-117n7.8	72	64.000	ENSCHOG00000003805	SRBD1	64	64.000	Choloepus_hoffmanni
ENSCSEG00000000856	si:ch211-117n7.8	84	57.344	ENSCPBG00000005677	SRBD1	97	52.495	Chrysemys_picta_bellii
ENSCSEG00000000856	si:ch211-117n7.8	79	39.900	ENSCING00000005950	-	99	39.900	Ciona_intestinalis
ENSCSEG00000000856	si:ch211-117n7.8	79	41.614	ENSCSAVG00000000861	-	99	41.110	Ciona_savignyi
ENSCSEG00000000856	si:ch211-117n7.8	88	55.034	ENSCANG00000016307	SRBD1	88	54.922	Colobus_angolensis_palliatus
ENSCSEG00000000856	si:ch211-117n7.8	85	55.504	ENSCGRG00001000513	Srbd1	85	55.386	Cricetulus_griseus_chok1gshd
ENSCSEG00000000856	si:ch211-117n7.8	85	55.504	ENSCGRG00000002283	Srbd1	85	55.386	Cricetulus_griseus_crigri
ENSCSEG00000000856	si:ch211-117n7.8	97	71.355	ENSCVAG00000020212	si:ch211-117n7.8	98	71.811	Cyprinodon_variegatus
ENSCSEG00000000856	si:ch211-117n7.8	84	55.879	ENSDNOG00000018686	SRBD1	84	55.763	Dasypus_novemcinctus
ENSCSEG00000000856	si:ch211-117n7.8	99	51.181	ENSDORG00000010468	Srbd1	100	51.083	Dipodomys_ordii
ENSCSEG00000000856	si:ch211-117n7.8	99	31.921	FBgn0051156	CG31156	99	31.921	Drosophila_melanogaster
ENSCSEG00000000856	si:ch211-117n7.8	74	56.080	ENSETEG00000000739	SRBD1	77	56.443	Echinops_telfairi
ENSCSEG00000000856	si:ch211-117n7.8	73	46.648	ENSEBUG00000008902	si:ch211-117n7.8	96	46.648	Eptatretus_burgeri
ENSCSEG00000000856	si:ch211-117n7.8	94	50.621	ENSEASG00005003132	SRBD1	98	54.887	Equus_asinus_asinus
ENSCSEG00000000856	si:ch211-117n7.8	94	52.277	ENSECAG00000013865	SRBD1	95	51.357	Equus_caballus
ENSCSEG00000000856	si:ch211-117n7.8	99	61.015	ENSELUG00000012592	si:ch211-117n7.8	99	61.303	Esox_lucius
ENSCSEG00000000856	si:ch211-117n7.8	86	56.000	ENSFCAG00000005101	SRBD1	85	55.886	Felis_catus
ENSCSEG00000000856	si:ch211-117n7.8	85	56.643	ENSFALG00000012966	SRBD1	97	51.777	Ficedula_albicollis
ENSCSEG00000000856	si:ch211-117n7.8	84	57.416	ENSFDAG00000016670	SRBD1	85	57.297	Fukomys_damarensis
ENSCSEG00000000856	si:ch211-117n7.8	100	70.646	ENSFHEG00000019480	si:ch211-117n7.8	100	70.450	Fundulus_heteroclitus
ENSCSEG00000000856	si:ch211-117n7.8	50	67.371	ENSGMOG00000018010	-	100	67.371	Gadus_morhua
ENSCSEG00000000856	si:ch211-117n7.8	84	58.392	ENSGALG00000009990	SRBD1	84	58.392	Gallus_gallus
ENSCSEG00000000856	si:ch211-117n7.8	100	71.344	ENSGAFG00000019664	si:ch211-117n7.8	100	71.640	Gambusia_affinis
ENSCSEG00000000856	si:ch211-117n7.8	63	76.827	ENSGACG00000010794	si:ch211-117n7.8	100	76.625	Gasterosteus_aculeatus
ENSCSEG00000000856	si:ch211-117n7.8	84	57.814	ENSGAGG00000006166	SRBD1	99	57.814	Gopherus_agassizii
ENSCSEG00000000856	si:ch211-117n7.8	86	55.936	ENSGGOG00000005910	SRBD1	88	55.822	Gorilla_gorilla
ENSCSEG00000000856	si:ch211-117n7.8	97	62.055	ENSHBUG00000013207	si:ch211-117n7.8	100	62.055	Haplochromis_burtoni
ENSCSEG00000000856	si:ch211-117n7.8	84	57.058	ENSHGLG00000018153	-	84	56.940	Heterocephalus_glaber_female
ENSCSEG00000000856	si:ch211-117n7.8	84	56.940	ENSHGLG00100015183	-	84	56.821	Heterocephalus_glaber_male
ENSCSEG00000000856	si:ch211-117n7.8	94	63.407	ENSIPUG00000009661	srbd1	99	61.416	Ictalurus_punctatus
ENSCSEG00000000856	si:ch211-117n7.8	99	51.578	ENSSTOG00000005898	SRBD1	100	51.479	Ictidomys_tridecemlineatus
ENSCSEG00000000856	si:ch211-117n7.8	84	54.374	ENSJJAG00000022244	Srbd1	83	54.374	Jaculus_jaculus
ENSCSEG00000000856	si:ch211-117n7.8	99	73.715	ENSKMAG00000003473	si:ch211-117n7.8	100	73.419	Kryptolebias_marmoratus
ENSCSEG00000000856	si:ch211-117n7.8	100	71.485	ENSLBEG00000027518	si:ch211-117n7.8	100	71.288	Labrus_bergylta
ENSCSEG00000000856	si:ch211-117n7.8	85	57.544	ENSLACG00000009790	SRBD1	99	56.842	Latimeria_chalumnae
ENSCSEG00000000856	si:ch211-117n7.8	96	59.821	ENSLOCG00000016360	si:ch211-117n7.8	99	58.965	Lepisosteus_oculatus
ENSCSEG00000000856	si:ch211-117n7.8	88	55.034	ENSMFAG00000042026	SRBD1	97	51.564	Macaca_fascicularis
ENSCSEG00000000856	si:ch211-117n7.8	88	55.034	ENSMMUG00000003490	SRBD1	88	54.922	Macaca_mulatta
ENSCSEG00000000856	si:ch211-117n7.8	88	53.356	ENSMNEG00000034701	SRBD1	100	49.216	Macaca_nemestrina
ENSCSEG00000000856	si:ch211-117n7.8	88	55.034	ENSMLEG00000000745	SRBD1	97	51.564	Mandrillus_leucophaeus
ENSCSEG00000000856	si:ch211-117n7.8	100	72.485	ENSMAMG00000021921	si:ch211-117n7.8	100	74.177	Mastacembelus_armatus
ENSCSEG00000000856	si:ch211-117n7.8	100	72.293	ENSMZEG00005027369	si:ch211-117n7.8	100	72.293	Maylandia_zebra
ENSCSEG00000000856	si:ch211-117n7.8	80	55.240	ENSMGAG00000010273	SRBD1	99	55.240	Meleagris_gallopavo
ENSCSEG00000000856	si:ch211-117n7.8	78	55.296	ENSMAUG00000013916	Srbd1	95	55.172	Mesocricetus_auratus
ENSCSEG00000000856	si:ch211-117n7.8	84	57.494	ENSMICG00000007835	SRBD1	84	57.377	Microcebus_murinus
ENSCSEG00000000856	si:ch211-117n7.8	85	55.294	ENSMOCG00000018716	Srbd1	97	49.161	Microtus_ochrogaster
ENSCSEG00000000856	si:ch211-117n7.8	97	70.667	ENSMMOG00000007507	si:ch211-117n7.8	100	70.462	Mola_mola
ENSCSEG00000000856	si:ch211-117n7.8	100	72.576	ENSMALG00000001562	si:ch211-117n7.8	100	72.870	Monopterus_albus
ENSCSEG00000000856	si:ch211-117n7.8	85	56.272	MGP_CAROLIEiJ_G0021934	Srbd1	99	55.844	Mus_caroli
ENSCSEG00000000856	si:ch211-117n7.8	85	56.773	ENSMUSG00000024135	Srbd1	99	54.348	Mus_musculus
ENSCSEG00000000856	si:ch211-117n7.8	85	55.948	MGP_PahariEiJ_G0020924	Srbd1	85	55.830	Mus_pahari
ENSCSEG00000000856	si:ch211-117n7.8	85	56.038	MGP_SPRETEiJ_G0022850	Srbd1	85	55.920	Mus_spretus
ENSCSEG00000000856	si:ch211-117n7.8	84	57.394	ENSMLUG00000007039	SRBD1	84	57.277	Myotis_lucifugus
ENSCSEG00000000856	si:ch211-117n7.8	88	53.341	ENSNGAG00000011893	Srbd1	87	53.231	Nannospalax_galili
ENSCSEG00000000856	si:ch211-117n7.8	97	70.863	ENSNBRG00000012873	si:ch211-117n7.8	99	70.761	Neolamprologus_brichardi
ENSCSEG00000000856	si:ch211-117n7.8	87	55.231	ENSNLEG00000016877	SRBD1	87	55.118	Nomascus_leucogenys
ENSCSEG00000000856	si:ch211-117n7.8	85	56.773	ENSODEG00000012095	SRBD1	86	56.655	Octodon_degus
ENSCSEG00000000856	si:ch211-117n7.8	100	72.968	ENSONIG00000000945	si:ch211-117n7.8	100	78.261	Oreochromis_niloticus
ENSCSEG00000000856	si:ch211-117n7.8	84	56.893	ENSOCUG00000015385	SRBD1	100	51.081	Oryctolagus_cuniculus
ENSCSEG00000000856	si:ch211-117n7.8	100	65.854	ENSORLG00000004427	si:ch211-117n7.8	100	66.112	Oryzias_latipes
ENSCSEG00000000856	si:ch211-117n7.8	100	68.841	ENSORLG00020012792	si:ch211-117n7.8	100	68.744	Oryzias_latipes_hni
ENSCSEG00000000856	si:ch211-117n7.8	100	68.616	ENSORLG00015018598	si:ch211-117n7.8	100	68.519	Oryzias_latipes_hsok
ENSCSEG00000000856	si:ch211-117n7.8	98	68.232	ENSOMEG00000012229	si:ch211-117n7.8	98	73.485	Oryzias_melastigma
ENSCSEG00000000856	si:ch211-117n7.8	84	54.982	ENSOGAG00000001076	SRBD1	84	54.982	Otolemur_garnettii
ENSCSEG00000000856	si:ch211-117n7.8	85	52.843	ENSOARG00000005958	SRBD1	100	47.682	Ovis_aries
ENSCSEG00000000856	si:ch211-117n7.8	84	56.659	ENSPPAG00000038442	SRBD1	97	51.310	Pan_paniscus
ENSCSEG00000000856	si:ch211-117n7.8	86	56.064	ENSPPRG00000003449	SRBD1	85	55.950	Panthera_pardus
ENSCSEG00000000856	si:ch211-117n7.8	86	56.064	ENSPTIG00000012495	SRBD1	85	55.950	Panthera_tigris_altaica
ENSCSEG00000000856	si:ch211-117n7.8	84	56.776	ENSPTRG00000011889	SRBD1	97	51.411	Pan_troglodytes
ENSCSEG00000000856	si:ch211-117n7.8	88	55.034	ENSPANG00000008063	SRBD1	97	51.564	Papio_anubis
ENSCSEG00000000856	si:ch211-117n7.8	96	60.308	ENSPKIG00000021973	si:ch211-117n7.8	99	59.172	Paramormyrops_kingsleyae
ENSCSEG00000000856	si:ch211-117n7.8	84	57.109	ENSPSIG00000008992	SRBD1	99	50.733	Pelodiscus_sinensis
ENSCSEG00000000856	si:ch211-117n7.8	97	69.333	ENSPMGG00000013348	si:ch211-117n7.8	99	69.160	Periophthalmus_magnuspinnatus
ENSCSEG00000000856	si:ch211-117n7.8	85	54.420	ENSPEMG00000020684	Srbd1	85	54.305	Peromyscus_maniculatus_bairdii
ENSCSEG00000000856	si:ch211-117n7.8	100	71.782	ENSPFOG00000010650	si:ch211-117n7.8	100	71.683	Poecilia_formosa
ENSCSEG00000000856	si:ch211-117n7.8	100	71.980	ENSPLAG00000002141	si:ch211-117n7.8	100	71.881	Poecilia_latipinna
ENSCSEG00000000856	si:ch211-117n7.8	100	71.881	ENSPMEG00000018537	si:ch211-117n7.8	100	71.782	Poecilia_mexicana
ENSCSEG00000000856	si:ch211-117n7.8	100	71.769	ENSPREG00000003258	si:ch211-117n7.8	100	71.769	Poecilia_reticulata
ENSCSEG00000000856	si:ch211-117n7.8	97	48.473	ENSPPYG00000012444	SRBD1	96	48.338	Pongo_abelii
ENSCSEG00000000856	si:ch211-117n7.8	76	51.774	ENSPCAG00000005629	SRBD1	80	51.643	Procavia_capensis
ENSCSEG00000000856	si:ch211-117n7.8	75	58.824	ENSPCOG00000017669	SRBD1	79	58.902	Propithecus_coquereli
ENSCSEG00000000856	si:ch211-117n7.8	84	49.941	ENSPVAG00000001782	SRBD1	84	49.824	Pteropus_vampyrus
ENSCSEG00000000856	si:ch211-117n7.8	97	68.534	ENSPNYG00000000508	si:ch211-117n7.8	100	68.432	Pundamilia_nyererei
ENSCSEG00000000856	si:ch211-117n7.8	94	63.915	ENSPNAG00000013492	SRBD1	99	61.447	Pygocentrus_nattereri
ENSCSEG00000000856	si:ch211-117n7.8	85	54.429	ENSRNOG00000014720	Srbd1	85	54.651	Rattus_norvegicus
ENSCSEG00000000856	si:ch211-117n7.8	88	54.810	ENSRBIG00000033486	SRBD1	100	50.736	Rhinopithecus_bieti
ENSCSEG00000000856	si:ch211-117n7.8	88	54.810	ENSRROG00000041599	SRBD1	100	50.736	Rhinopithecus_roxellana
ENSCSEG00000000856	si:ch211-117n7.8	88	54.821	ENSSBOG00000024982	SRBD1	100	50.539	Saimiri_boliviensis_boliviensis
ENSCSEG00000000856	si:ch211-117n7.8	87	63.479	ENSSFOG00015001128	si:ch211-117n7.8	93	63.521	Scleropages_formosus
ENSCSEG00000000856	si:ch211-117n7.8	100	72.949	ENSSMAG00000018256	si:ch211-117n7.8	100	72.754	Scophthalmus_maximus
ENSCSEG00000000856	si:ch211-117n7.8	96	74.949	ENSSLDG00000023189	si:ch211-117n7.8	99	73.689	Seriola_lalandi_dorsalis
ENSCSEG00000000856	si:ch211-117n7.8	86	52.184	ENSSARG00000009740	SRBD1	87	51.724	Sorex_araneus
ENSCSEG00000000856	si:ch211-117n7.8	85	58.402	ENSSPUG00000010475	SRBD1	99	54.873	Sphenodon_punctatus
ENSCSEG00000000856	si:ch211-117n7.8	92	73.753	ENSSPAG00000008092	-	100	70.348	Stegastes_partitus
ENSCSEG00000000856	si:ch211-117n7.8	85	56.810	ENSSSCG00000008445	SRBD1	83	56.694	Sus_scrofa
ENSCSEG00000000856	si:ch211-117n7.8	84	57.462	ENSTGUG00000003878	SRBD1	100	57.227	Taeniopygia_guttata
ENSCSEG00000000856	si:ch211-117n7.8	99	67.739	ENSTRUG00000007080	si:ch211-117n7.8	99	73.631	Takifugu_rubripes
ENSCSEG00000000856	si:ch211-117n7.8	99	66.892	ENSTNIG00000007464	si:ch211-117n7.8	99	66.602	Tetraodon_nigroviridis
ENSCSEG00000000856	si:ch211-117n7.8	56	81.915	ENSTBEG00000004556	SRBD1	55	81.915	Tupaia_belangeri
ENSCSEG00000000856	si:ch211-117n7.8	79	58.176	ENSTTRG00000011871	SRBD1	93	53.398	Tursiops_truncatus
ENSCSEG00000000856	si:ch211-117n7.8	86	56.437	ENSUAMG00000008126	SRBD1	97	53.763	Ursus_americanus
ENSCSEG00000000856	si:ch211-117n7.8	86	56.437	ENSUMAG00000012902	SRBD1	98	50.783	Ursus_maritimus
ENSCSEG00000000856	si:ch211-117n7.8	85	56.431	ENSVPAG00000006825	SRBD1	92	56.315	Vicugna_pacos
ENSCSEG00000000856	si:ch211-117n7.8	88	55.618	ENSVVUG00000005389	SRBD1	100	50.737	Vulpes_vulpes
ENSCSEG00000000856	si:ch211-117n7.8	98	43.900	ENSXETG00000002760	srbd1	99	43.804	Xenopus_tropicalis
ENSCSEG00000000856	si:ch211-117n7.8	100	71.302	ENSXMAG00000016861	si:ch211-117n7.8	100	71.105	Xiphophorus_maculatus