EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000000918 (Gene tree)
Gene ID: 103379819
Gene Symbol: si:dkey-10o6.2 (1 of many)
Alias: -
Full Name: UPF0676 protein C1494.01-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 8350 bases
Position: chr6:5332829-5341178
Accession: 103379819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001337	2OG-FeII_Oxy	PF03171.20	1.1e-12	1	1
ENSCSEP00000001331	2OG-FeII_Oxy	PF03171.20	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001360	-	3559	XM_008311500	ENSCSEP00000001331	307 (aa)	XP_008309722	-
ENSCSET00000001366	-	933	XM_017033213	ENSCSEP00000001337	310 (aa)	XP_016888702	-

Gene Model

Click here to download ENSCSEG00000000918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000000918	si:dkey-10o6.2	99	76.849	ENSCSEG00000000927	si:dkey-10o6.2	100	76.849

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000918	si:dkey-10o6.2	82	68.605	ENSAPOG00000011678	si:dkey-10o6.2	90	68.605	Acanthochromis_polyacanthus
ENSCSEG00000000918	si:dkey-10o6.2	96	69.868	ENSACIG00000024115	si:dkey-10o6.2	96	69.868	Amphilophus_citrinellus
ENSCSEG00000000918	si:dkey-10o6.2	99	66.881	ENSACIG00000011675	-	100	66.881	Amphilophus_citrinellus
ENSCSEG00000000918	si:dkey-10o6.2	98	67.857	ENSAOCG00000013068	si:dkey-10o6.2	99	67.857	Amphiprion_ocellaris
ENSCSEG00000000918	si:dkey-10o6.2	98	67.857	ENSAPEG00000011246	si:dkey-10o6.2	99	67.857	Amphiprion_percula
ENSCSEG00000000918	si:dkey-10o6.2	99	68.710	ENSATEG00000021945	si:dkey-10o6.2	99	68.710	Anabas_testudineus
ENSCSEG00000000918	si:dkey-10o6.2	99	68.065	ENSATEG00000000030	si:dkey-10o6.2	99	68.065	Anabas_testudineus
ENSCSEG00000000918	si:dkey-10o6.2	99	67.097	ENSATEG00000021952	si:dkey-10o6.2	99	67.097	Anabas_testudineus
ENSCSEG00000000918	si:dkey-10o6.2	99	67.846	ENSACLG00000023011	si:dkey-10o6.2	100	67.846	Astatotilapia_calliptera
ENSCSEG00000000918	si:dkey-10o6.2	98	59.223	ENSAMXG00000021555	si:dkey-10o6.2	99	59.223	Astyanax_mexicanus
ENSCSEG00000000918	si:dkey-10o6.2	90	40.972	ENSCING00000007255	-	86	40.972	Ciona_intestinalis
ENSCSEG00000000918	si:dkey-10o6.2	76	38.750	ENSCING00000011926	-	99	38.750	Ciona_intestinalis
ENSCSEG00000000918	si:dkey-10o6.2	89	36.644	ENSCING00000016920	-	84	36.644	Ciona_intestinalis
ENSCSEG00000000918	si:dkey-10o6.2	89	36.897	ENSCING00000022311	-	88	36.897	Ciona_intestinalis
ENSCSEG00000000918	si:dkey-10o6.2	89	35.192	ENSCING00000012500	-	87	35.192	Ciona_intestinalis
ENSCSEG00000000918	si:dkey-10o6.2	78	33.469	ENSCSAVG00000001337	-	99	33.469	Ciona_savignyi
ENSCSEG00000000918	si:dkey-10o6.2	97	34.365	ENSCSAVG00000004616	-	98	34.365	Ciona_savignyi
ENSCSEG00000000918	si:dkey-10o6.2	89	31.010	ENSCSAVG00000000201	-	87	31.010	Ciona_savignyi
ENSCSEG00000000918	si:dkey-10o6.2	99	69.453	ENSCVAG00000015074	si:dkey-10o6.2	100	69.453	Cyprinodon_variegatus
ENSCSEG00000000918	si:dkey-10o6.2	98	63.312	ENSDARG00000074628	si:dkey-10o6.2	88	63.312	Danio_rerio
ENSCSEG00000000918	si:dkey-10o6.2	91	30.000	FBgn0053093	CG33093	86	30.000	Drosophila_melanogaster
ENSCSEG00000000918	si:dkey-10o6.2	99	64.078	ENSELUG00000003488	si:dkey-10o6.2	99	64.078	Esox_lucius
ENSCSEG00000000918	si:dkey-10o6.2	99	65.595	ENSFHEG00000019035	si:dkey-10o6.2	100	65.595	Fundulus_heteroclitus
ENSCSEG00000000918	si:dkey-10o6.2	96	61.921	ENSGMOG00000018989	si:dkey-10o6.2	100	61.921	Gadus_morhua
ENSCSEG00000000918	si:dkey-10o6.2	99	67.097	ENSGAFG00000006137	si:dkey-10o6.2	99	67.097	Gambusia_affinis
ENSCSEG00000000918	si:dkey-10o6.2	98	61.059	ENSGACG00000006806	si:dkey-10o6.2	99	61.059	Gasterosteus_aculeatus
ENSCSEG00000000918	si:dkey-10o6.2	99	67.846	ENSHBUG00000008853	si:dkey-10o6.2	100	67.846	Haplochromis_burtoni
ENSCSEG00000000918	si:dkey-10o6.2	99	64.423	ENSHCOG00000017626	si:dkey-10o6.2	100	64.423	Hippocampus_comes
ENSCSEG00000000918	si:dkey-10o6.2	100	60.000	ENSHCOG00000017671	-	100	60.577	Hippocampus_comes
ENSCSEG00000000918	si:dkey-10o6.2	98	59.740	ENSIPUG00000018911	-	99	59.740	Ictalurus_punctatus
ENSCSEG00000000918	si:dkey-10o6.2	98	59.740	ENSIPUG00000018879	si:dkey-10o6.2	91	59.091	Ictalurus_punctatus
ENSCSEG00000000918	si:dkey-10o6.2	99	62.581	ENSKMAG00000006197	si:dkey-10o6.2	99	62.581	Kryptolebias_marmoratus
ENSCSEG00000000918	si:dkey-10o6.2	98	61.889	ENSLBEG00000003839	si:dkey-10o6.2	99	61.889	Labrus_bergylta
ENSCSEG00000000918	si:dkey-10o6.2	99	58.576	ENSLBEG00000003823	si:dkey-10o6.2	91	58.576	Labrus_bergylta
ENSCSEG00000000918	si:dkey-10o6.2	99	66.026	ENSMAMG00000023026	-	100	66.026	Mastacembelus_armatus
ENSCSEG00000000918	si:dkey-10o6.2	99	65.385	ENSMAMG00000023025	-	100	65.385	Mastacembelus_armatus
ENSCSEG00000000918	si:dkey-10o6.2	99	64.952	ENSMAMG00000023022	si:dkey-10o6.2	99	64.952	Mastacembelus_armatus
ENSCSEG00000000918	si:dkey-10o6.2	99	66.238	ENSMAMG00000023020	si:dkey-10o6.2	99	66.238	Mastacembelus_armatus
ENSCSEG00000000918	si:dkey-10o6.2	99	68.167	ENSMZEG00005012018	si:dkey-10o6.2	100	68.167	Maylandia_zebra
ENSCSEG00000000918	si:dkey-10o6.2	97	60.518	ENSMMOG00000020383	si:dkey-10o6.2	96	60.518	Mola_mola
ENSCSEG00000000918	si:dkey-10o6.2	99	62.300	ENSMALG00000011300	si:dkey-10o6.2	100	62.300	Monopterus_albus
ENSCSEG00000000918	si:dkey-10o6.2	99	63.754	ENSNBRG00000015840	si:dkey-10o6.2	100	63.754	Neolamprologus_brichardi
ENSCSEG00000000918	si:dkey-10o6.2	99	67.742	ENSONIG00000015572	si:dkey-10o6.2	100	67.524	Oreochromis_niloticus
ENSCSEG00000000918	si:dkey-10o6.2	99	62.581	ENSORLG00000001314	si:dkey-10o6.2	100	62.581	Oryzias_latipes
ENSCSEG00000000918	si:dkey-10o6.2	99	63.548	ENSORLG00020002660	si:dkey-10o6.2	100	63.548	Oryzias_latipes_hni
ENSCSEG00000000918	si:dkey-10o6.2	99	62.258	ENSOMEG00000003617	si:dkey-10o6.2	97	62.258	Oryzias_melastigma
ENSCSEG00000000918	si:dkey-10o6.2	99	59.223	ENSPKIG00000024109	-	98	60.547	Paramormyrops_kingsleyae
ENSCSEG00000000918	si:dkey-10o6.2	98	61.093	ENSPKIG00000004183	si:dkey-10o6.2	86	61.093	Paramormyrops_kingsleyae
ENSCSEG00000000918	si:dkey-10o6.2	98	59.871	ENSPKIG00000004206	si:dkey-10o6.2	80	59.871	Paramormyrops_kingsleyae
ENSCSEG00000000918	si:dkey-10o6.2	98	55.556	ENSPMGG00000021603	si:dkey-10o6.2	99	55.556	Periophthalmus_magnuspinnatus
ENSCSEG00000000918	si:dkey-10o6.2	99	63.462	ENSPFOG00000017244	si:dkey-10o6.2	99	63.462	Poecilia_formosa
ENSCSEG00000000918	si:dkey-10o6.2	98	63.961	ENSPLAG00000008037	si:dkey-10o6.2	99	63.961	Poecilia_latipinna
ENSCSEG00000000918	si:dkey-10o6.2	69	66.972	ENSPMEG00000020748	si:dkey-10o6.2	98	67.130	Poecilia_mexicana
ENSCSEG00000000918	si:dkey-10o6.2	99	64.935	ENSPREG00000005108	si:dkey-10o6.2	99	64.935	Poecilia_reticulata
ENSCSEG00000000918	si:dkey-10o6.2	99	67.524	ENSPNYG00000010698	si:dkey-10o6.2	100	67.524	Pundamilia_nyererei
ENSCSEG00000000918	si:dkey-10o6.2	83	59.004	ENSPNAG00000014485	-	79	59.004	Pygocentrus_nattereri
ENSCSEG00000000918	si:dkey-10o6.2	99	60.897	ENSPNAG00000014123	si:dkey-10o6.2	98	60.897	Pygocentrus_nattereri
ENSCSEG00000000918	si:dkey-10o6.2	94	60.269	ENSSFOG00015015345	si:dkey-10o6.2	96	60.269	Scleropages_formosus
ENSCSEG00000000918	si:dkey-10o6.2	99	68.285	ENSSMAG00000019016	si:dkey-10o6.2	100	68.285	Scophthalmus_maximus
ENSCSEG00000000918	si:dkey-10o6.2	99	68.489	ENSSDUG00000000943	si:dkey-10o6.2	100	68.489	Seriola_dumerili
ENSCSEG00000000918	si:dkey-10o6.2	99	68.167	ENSSLDG00000003462	si:dkey-10o6.2	100	68.167	Seriola_lalandi_dorsalis
ENSCSEG00000000918	si:dkey-10o6.2	98	67.857	ENSSPAG00000020962	si:dkey-10o6.2	99	67.857	Stegastes_partitus
ENSCSEG00000000918	si:dkey-10o6.2	98	57.605	ENSTRUG00000019532	si:dkey-10o6.2	99	57.605	Takifugu_rubripes
ENSCSEG00000000918	si:dkey-10o6.2	99	63.987	ENSXCOG00000000855	si:dkey-10o6.2	99	63.987	Xiphophorus_couchianus
ENSCSEG00000000918	si:dkey-10o6.2	99	64.839	ENSXMAG00000012432	si:dkey-10o6.2	99	64.839	Xiphophorus_maculatus