EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000000932 (Gene tree)
Gene ID: -
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4518 bases
Position: chr3:15482193-15486710
Accession: 103377532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001371	MA3	PF02847.17	1.1e-18	1	1
ENSCSEP00000001371	MIF4G	PF02854.19	5.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001400	-	2428	XM_008308372	ENSCSEP00000001371	809 (aa)	XP_008306594	-

Gene Model

Click here to download ENSCSEG00000000932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000932's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000932	nom1	63	65.377	ENSG00000146909	NOM1	75	59.565	Homo_sapiens
ENSCSEG00000000932	nom1	77	56.212	ENSAMEG00000001412	NOM1	89	56.288	Ailuropoda_melanoleuca
ENSCSEG00000000932	nom1	96	69.554	ENSACIG00000018050	nom1	93	70.703	Amphilophus_citrinellus
ENSCSEG00000000932	nom1	61	82.435	ENSAOCG00000006229	nom1	98	70.077	Amphiprion_ocellaris
ENSCSEG00000000932	nom1	61	82.635	ENSAPEG00000015994	nom1	98	70.769	Amphiprion_percula
ENSCSEG00000000932	nom1	94	74.282	ENSATEG00000005405	nom1	94	74.349	Anabas_testudineus
ENSCSEG00000000932	nom1	75	58.946	ENSAPLG00000006585	NOM1	95	59.135	Anas_platyrhynchos
ENSCSEG00000000932	nom1	67	61.622	ENSACAG00000011192	NOM1	81	54.089	Anolis_carolinensis
ENSCSEG00000000932	nom1	96	68.466	ENSACLG00000000033	nom1	98	69.110	Astatotilapia_calliptera
ENSCSEG00000000932	nom1	61	73.992	ENSAMXG00000041486	nom1	94	57.561	Astyanax_mexicanus
ENSCSEG00000000932	nom1	94	52.125	ENSBTAG00000016435	NOM1	83	54.114	Bos_taurus
ENSCSEG00000000932	nom1	94	53.023	ENSCJAG00000004336	NOM1	80	57.536	Callithrix_jacchus
ENSCSEG00000000932	nom1	77	57.557	ENSCAFG00020005121	NOM1	74	57.253	Canis_lupus_dingo
ENSCSEG00000000932	nom1	77	56.601	ENSCHIG00000020102	NOM1	86	53.434	Capra_hircus
ENSCSEG00000000932	nom1	90	56.166	ENSTSYG00000000227	NOM1	84	56.417	Carlito_syrichta
ENSCSEG00000000932	nom1	60	67.683	ENSCAPG00000016273	NOM1	93	67.683	Cavia_aperea
ENSCSEG00000000932	nom1	94	50.062	ENSCPOG00000025538	NOM1	73	55.981	Cavia_porcellus
ENSCSEG00000000932	nom1	71	68.112	ENSCCAG00000014944	NOM1	90	67.593	Cebus_capucinus
ENSCSEG00000000932	nom1	77	57.604	ENSCLAG00000000267	NOM1	75	58.333	Chinchilla_lanigera
ENSCSEG00000000932	nom1	78	59.133	ENSCPBG00000018215	NOM1	69	58.880	Chrysemys_picta_bellii
ENSCSEG00000000932	nom1	80	35.226	ENSCING00000005248	-	86	36.150	Ciona_intestinalis
ENSCSEG00000000932	nom1	61	66.139	ENSCANG00000041984	NOM1	85	66.400	Colobus_angolensis_palliatus
ENSCSEG00000000932	nom1	77	57.822	ENSCGRG00001020293	Nom1	75	56.748	Cricetulus_griseus_chok1gshd
ENSCSEG00000000932	nom1	60	66.463	ENSCGRG00000005405	Nom1	92	66.463	Cricetulus_griseus_crigri
ENSCSEG00000000932	nom1	94	67.125	ENSCVAG00000007562	nom1	94	67.293	Cyprinodon_variegatus
ENSCSEG00000000932	nom1	96	61.816	ENSDARG00000060027	nom1	93	75.110	Danio_rerio
ENSCSEG00000000932	nom1	60	55.912	ENSDORG00000015682	Nom1	92	48.758	Dipodomys_ordii
ENSCSEG00000000932	nom1	85	35.705	FBgn0035336	CG9004	76	36.239	Drosophila_melanogaster
ENSCSEG00000000932	nom1	69	56.777	ENSETEG00000003104	NOM1	84	56.777	Echinops_telfairi
ENSCSEG00000000932	nom1	77	60.809	ENSEASG00005001489	NOM1	74	61.392	Equus_asinus_asinus
ENSCSEG00000000932	nom1	64	66.603	ENSECAG00000007596	NOM1	70	59.451	Equus_caballus
ENSCSEG00000000932	nom1	63	75.634	ENSELUG00000006266	nom1	94	64.160	Esox_lucius
ENSCSEG00000000932	nom1	77	57.911	ENSFCAG00000006467	NOM1	78	58.075	Felis_catus
ENSCSEG00000000932	nom1	76	57.740	ENSFALG00000006904	NOM1	92	58.204	Ficedula_albicollis
ENSCSEG00000000932	nom1	96	50.425	ENSFDAG00000016241	NOM1	82	56.851	Fukomys_damarensis
ENSCSEG00000000932	nom1	94	68.015	ENSFHEG00000015974	nom1	94	68.234	Fundulus_heteroclitus
ENSCSEG00000000932	nom1	90	59.895	ENSGMOG00000005129	nom1	93	60.268	Gadus_morhua
ENSCSEG00000000932	nom1	75	56.829	ENSGALG00000006437	NOM1	78	56.178	Gallus_gallus
ENSCSEG00000000932	nom1	98	66.425	ENSGAFG00000003211	nom1	94	69.975	Gambusia_affinis
ENSCSEG00000000932	nom1	78	58.179	ENSGAGG00000014347	NOM1	83	56.808	Gopherus_agassizii
ENSCSEG00000000932	nom1	63	65.444	ENSGGOG00000010920	NOM1	69	59.627	Gorilla_gorilla
ENSCSEG00000000932	nom1	96	68.480	ENSHBUG00000014616	nom1	98	69.463	Haplochromis_burtoni
ENSCSEG00000000932	nom1	94	52.833	ENSHGLG00000007392	NOM1	80	56.547	Heterocephalus_glaber_female
ENSCSEG00000000932	nom1	82	68.070	ENSHGLG00100014407	NOM1	77	68.070	Heterocephalus_glaber_male
ENSCSEG00000000932	nom1	62	70.276	ENSIPUG00000013980	nom1	94	56.910	Ictalurus_punctatus
ENSCSEG00000000932	nom1	63	64.865	ENSSTOG00000031736	NOM1	87	66.265	Ictidomys_tridecemlineatus
ENSCSEG00000000932	nom1	57	69.114	ENSJJAG00000011716	Nom1	93	69.114	Jaculus_jaculus
ENSCSEG00000000932	nom1	94	68.221	ENSLBEG00000009252	nom1	94	68.299	Labrus_bergylta
ENSCSEG00000000932	nom1	81	59.007	ENSLACG00000011777	NOM1	85	58.924	Latimeria_chalumnae
ENSCSEG00000000932	nom1	94	62.404	ENSLOCG00000012452	nom1	96	61.844	Lepisosteus_oculatus
ENSCSEG00000000932	nom1	94	49.035	ENSLAFG00000007119	NOM1	94	49.296	Loxodonta_africana
ENSCSEG00000000932	nom1	94	50.124	ENSMMUG00000039033	NOM1	78	55.152	Macaca_mulatta
ENSCSEG00000000932	nom1	61	67.200	ENSMLEG00000037062	NOM1	94	67.200	Mandrillus_leucophaeus
ENSCSEG00000000932	nom1	94	70.200	ENSMAMG00000004118	nom1	94	70.037	Mastacembelus_armatus
ENSCSEG00000000932	nom1	96	68.103	ENSMZEG00005000384	nom1	94	69.670	Maylandia_zebra
ENSCSEG00000000932	nom1	80	56.845	ENSMGAG00000005051	NOM1	94	57.447	Meleagris_gallopavo
ENSCSEG00000000932	nom1	94	52.387	ENSMAUG00000017988	Nom1	76	57.788	Mesocricetus_auratus
ENSCSEG00000000932	nom1	63	63.566	ENSMICG00000017531	NOM1	79	56.845	Microcebus_murinus
ENSCSEG00000000932	nom1	96	50.847	ENSMOCG00000015962	Nom1	74	58.556	Microtus_ochrogaster
ENSCSEG00000000932	nom1	93	67.405	ENSMMOG00000004419	nom1	88	69.374	Mola_mola
ENSCSEG00000000932	nom1	62	65.759	ENSMODG00000005177	NOM1	76	59.225	Monodelphis_domestica
ENSCSEG00000000932	nom1	92	70.641	ENSMALG00000008800	nom1	98	70.581	Monopterus_albus
ENSCSEG00000000932	nom1	94	51.557	MGP_CAROLIEiJ_G0027043	Nom1	91	51.327	Mus_caroli
ENSCSEG00000000932	nom1	94	52.882	ENSMUSG00000001569	Nom1	91	51.013	Mus_musculus
ENSCSEG00000000932	nom1	94	53.157	MGP_SPRETEiJ_G0028039	Nom1	91	51.020	Mus_spretus
ENSCSEG00000000932	nom1	77	56.790	ENSMPUG00000009745	NOM1	93	55.850	Mustela_putorius_furo
ENSCSEG00000000932	nom1	67	62.523	ENSMLUG00000009129	NOM1	82	66.200	Myotis_lucifugus
ENSCSEG00000000932	nom1	96	69.527	ENSNBRG00000016429	nom1	89	82.222	Neolamprologus_brichardi
ENSCSEG00000000932	nom1	63	63.056	ENSNLEG00000000238	NOM1	79	56.662	Nomascus_leucogenys
ENSCSEG00000000932	nom1	54	61.953	ENSMEUG00000001108	NOM1	72	53.378	Notamacropus_eugenii
ENSCSEG00000000932	nom1	77	57.580	ENSODEG00000009399	NOM1	91	56.656	Octodon_degus
ENSCSEG00000000932	nom1	90	70.356	ENSONIG00000005958	nom1	96	70.503	Oreochromis_niloticus
ENSCSEG00000000932	nom1	54	66.968	ENSOANG00000006139	-	92	66.968	Ornithorhynchus_anatinus
ENSCSEG00000000932	nom1	94	52.809	ENSOCUG00000004071	-	75	59.498	Oryctolagus_cuniculus
ENSCSEG00000000932	nom1	88	46.639	ENSOCUG00000021448	-	80	49.431	Oryctolagus_cuniculus
ENSCSEG00000000932	nom1	96	68.030	ENSORLG00000010541	nom1	94	68.136	Oryzias_latipes
ENSCSEG00000000932	nom1	88	67.919	ENSORLG00020010789	nom1	95	68.371	Oryzias_latipes_hni
ENSCSEG00000000932	nom1	96	67.614	ENSORLG00015010475	nom1	95	68.826	Oryzias_latipes_hsok
ENSCSEG00000000932	nom1	96	64.994	ENSOMEG00000004219	nom1	94	68.546	Oryzias_melastigma
ENSCSEG00000000932	nom1	68	59.686	ENSOGAG00000001124	NOM1	82	65.731	Otolemur_garnettii
ENSCSEG00000000932	nom1	77	57.208	ENSOARG00000007261	NOM1	87	56.744	Ovis_aries
ENSCSEG00000000932	nom1	94	52.088	ENSPPAG00000041374	NOM1	75	59.253	Pan_paniscus
ENSCSEG00000000932	nom1	77	57.975	ENSPTIG00000013532	NOM1	88	57.829	Panthera_tigris_altaica
ENSCSEG00000000932	nom1	90	53.342	ENSPTRG00000019917	NOM1	75	59.253	Pan_troglodytes
ENSCSEG00000000932	nom1	94	53.442	ENSPANG00000007605	NOM1	79	58.177	Papio_anubis
ENSCSEG00000000932	nom1	95	57.953	ENSPKIG00000005825	nom1	94	58.354	Paramormyrops_kingsleyae
ENSCSEG00000000932	nom1	61	67.262	ENSPSIG00000017848	NOM1	83	67.735	Pelodiscus_sinensis
ENSCSEG00000000932	nom1	94	68.758	ENSPMGG00000002577	nom1	94	69.627	Periophthalmus_magnuspinnatus
ENSCSEG00000000932	nom1	94	52.993	ENSPEMG00000024180	Nom1	91	51.889	Peromyscus_maniculatus_bairdii
ENSCSEG00000000932	nom1	63	65.251	ENSPCIG00000027941	NOM1	73	57.315	Phascolarctos_cinereus
ENSCSEG00000000932	nom1	99	66.905	ENSPFOG00000015771	nom1	95	69.625	Poecilia_formosa
ENSCSEG00000000932	nom1	65	77.966	ENSPLAG00000007856	nom1	94	70.013	Poecilia_latipinna
ENSCSEG00000000932	nom1	99	67.282	ENSPMEG00000014155	nom1	95	69.750	Poecilia_mexicana
ENSCSEG00000000932	nom1	94	69.472	ENSPREG00000008850	nom1	94	69.823	Poecilia_reticulata
ENSCSEG00000000932	nom1	90	51.123	ENSPPYG00000018222	NOM1	79	53.314	Pongo_abelii
ENSCSEG00000000932	nom1	76	59.165	ENSPCAG00000000440	NOM1	76	59.165	Procavia_capensis
ENSCSEG00000000932	nom1	61	65.130	ENSPCOG00000015222	NOM1	94	65.130	Propithecus_coquereli
ENSCSEG00000000932	nom1	96	50.061	ENSPVAG00000014760	NOM1	74	56.698	Pteropus_vampyrus
ENSCSEG00000000932	nom1	96	68.103	ENSPNYG00000006975	nom1	90	81.855	Pundamilia_nyererei
ENSCSEG00000000932	nom1	87	69.901	ENSPNAG00000011085	nom1	94	54.935	Pygocentrus_nattereri
ENSCSEG00000000932	nom1	94	50.439	ENSRNOG00000048969	AABR07059041.1	78	54.747	Rattus_norvegicus
ENSCSEG00000000932	nom1	90	54.534	ENSRBIG00000037042	NOM1	79	57.849	Rhinopithecus_bieti
ENSCSEG00000000932	nom1	94	52.802	ENSRROG00000037293	NOM1	79	57.558	Rhinopithecus_roxellana
ENSCSEG00000000932	nom1	65	64.083	ENSSHAG00000017998	-	92	58.991	Sarcophilus_harrisii
ENSCSEG00000000932	nom1	51	59.903	ENSSHAG00000002835	-	99	59.903	Sarcophilus_harrisii
ENSCSEG00000000932	nom1	56	75.000	ENSSFOG00015003196	nom1	93	75.000	Scleropages_formosus
ENSCSEG00000000932	nom1	96	69.939	ENSSMAG00000011047	nom1	99	69.075	Scophthalmus_maximus
ENSCSEG00000000932	nom1	61	85.312	ENSSDUG00000006834	nom1	94	72.716	Seriola_dumerili
ENSCSEG00000000932	nom1	61	84.708	ENSSLDG00000021812	nom1	94	72.579	Seriola_lalandi_dorsalis
ENSCSEG00000000932	nom1	81	48.143	ENSSPUG00000002556	NOM1	81	68.571	Sphenodon_punctatus
ENSCSEG00000000932	nom1	61	84.306	ENSSPAG00000000953	nom1	94	69.804	Stegastes_partitus
ENSCSEG00000000932	nom1	76	55.538	ENSTGUG00000000702	-	92	55.418	Taeniopygia_guttata
ENSCSEG00000000932	nom1	94	69.123	ENSTRUG00000010239	nom1	95	69.886	Takifugu_rubripes
ENSCSEG00000000932	nom1	94	67.821	ENSTNIG00000012783	nom1	96	68.428	Tetraodon_nigroviridis
ENSCSEG00000000932	nom1	77	57.927	ENSTTRG00000009691	NOM1	79	56.054	Tursiops_truncatus
ENSCSEG00000000932	nom1	77	57.337	ENSUAMG00000025450	NOM1	74	57.645	Ursus_americanus
ENSCSEG00000000932	nom1	77	59.062	ENSUMAG00000014275	NOM1	89	58.254	Ursus_maritimus
ENSCSEG00000000932	nom1	70	68.617	ENSVVUG00000002608	NOM1	72	68.617	Vulpes_vulpes
ENSCSEG00000000932	nom1	79	56.725	ENSXETG00000021611	nom1	82	72.059	Xenopus_tropicalis
ENSCSEG00000000932	nom1	98	68.254	ENSXMAG00000002451	nom1	94	70.281	Xiphophorus_maculatus