EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000000938 (Gene tree)
Gene ID: 103391526
Gene Symbol: nup35
Alias: fj68d11|wu:fj68d11|zgc:65979
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3735 bases
Position: chr16:924943-928677
Accession: 103391526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001356	Nup35_RRM	PF05172.13	5.4e-25	1	1
ENSCSEP00000001356	Nup35_RRM_2	PF14605.6	3.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001385	-	1407	XM_008327817	ENSCSEP00000001356	298 (aa)	XP_008326039	UPI000496E4F6

Gene Model

Click here to download ENSCSEG00000000938's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000000938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000000938	nup35	99	58.934	ENSG00000163002	NUP35	100	62.025	Homo_sapiens
ENSCSEG00000000938	nup35	100	78.261	ENSAPOG00000003630	nup35	100	80.602	Acanthochromis_polyacanthus
ENSCSEG00000000938	nup35	99	57.764	ENSAMEG00000001191	NUP35	96	57.764	Ailuropoda_melanoleuca
ENSCSEG00000000938	nup35	78	81.116	ENSACIG00000023984	nup35	96	83.262	Amphilophus_citrinellus
ENSCSEG00000000938	nup35	100	78.595	ENSAOCG00000007484	nup35	100	80.936	Amphiprion_ocellaris
ENSCSEG00000000938	nup35	100	78.930	ENSAPEG00000020027	nup35	100	80.936	Amphiprion_percula
ENSCSEG00000000938	nup35	100	82.274	ENSATEG00000019305	nup35	100	82.609	Anabas_testudineus
ENSCSEG00000000938	nup35	99	59.502	ENSAPLG00000009161	NUP35	97	59.502	Anas_platyrhynchos
ENSCSEG00000000938	nup35	99	60.377	ENSACAG00000008692	NUP35	96	60.377	Anolis_carolinensis
ENSCSEG00000000938	nup35	99	58.491	ENSANAG00000021090	NUP35	96	58.491	Aotus_nancymaae
ENSCSEG00000000938	nup35	100	80.000	ENSACLG00000013918	nup35	100	80.000	Astatotilapia_calliptera
ENSCSEG00000000938	nup35	99	64.650	ENSAMXG00000003371	nup35	100	64.725	Astyanax_mexicanus
ENSCSEG00000000938	nup35	99	59.248	ENSBTAG00000009777	NUP35	96	59.248	Bos_taurus
ENSCSEG00000000938	nup35	99	58.621	ENSCJAG00000011104	NUP35	96	58.621	Callithrix_jacchus
ENSCSEG00000000938	nup35	97	58.675	ENSCAFG00000031849	NUP35	100	58.675	Canis_familiaris
ENSCSEG00000000938	nup35	98	58.879	ENSCAFG00020008408	NUP35	96	58.879	Canis_lupus_dingo
ENSCSEG00000000938	nup35	97	59.236	ENSCHIG00000023148	NUP35	100	59.236	Capra_hircus
ENSCSEG00000000938	nup35	99	57.547	ENSTSYG00000002117	NUP35	96	57.547	Carlito_syrichta
ENSCSEG00000000938	nup35	98	47.500	ENSCAPG00000005703	NUP35	97	49.221	Cavia_aperea
ENSCSEG00000000938	nup35	99	57.812	ENSCPOG00000011906	NUP35	97	59.621	Cavia_porcellus
ENSCSEG00000000938	nup35	99	58.621	ENSCCAG00000025009	NUP35	91	65.574	Cebus_capucinus
ENSCSEG00000000938	nup35	99	52.922	ENSCATG00000033109	NUP35	96	52.922	Cercocebus_atys
ENSCSEG00000000938	nup35	99	57.053	ENSCLAG00000012559	NUP35	96	57.367	Chinchilla_lanigera
ENSCSEG00000000938	nup35	99	58.621	ENSCSAG00000012620	NUP35	96	58.621	Chlorocebus_sabaeus
ENSCSEG00000000938	nup35	100	60.991	ENSCPBG00000001303	NUP35	98	61.300	Chrysemys_picta_bellii
ENSCSEG00000000938	nup35	97	41.411	ENSCING00000009659	-	97	41.411	Ciona_intestinalis
ENSCSEG00000000938	nup35	97	39.941	ENSCSAVG00000007467	-	99	39.941	Ciona_savignyi
ENSCSEG00000000938	nup35	99	58.621	ENSCANG00000030785	NUP35	100	58.599	Colobus_angolensis_palliatus
ENSCSEG00000000938	nup35	99	59.306	ENSCGRG00001018638	-	96	59.494	Cricetulus_griseus_chok1gshd
ENSCSEG00000000938	nup35	99	59.306	ENSCGRG00000011313	-	96	59.494	Cricetulus_griseus_crigri
ENSCSEG00000000938	nup35	100	80.268	ENSCVAG00000001792	nup35	100	80.936	Cyprinodon_variegatus
ENSCSEG00000000938	nup35	100	64.353	ENSDARG00000012222	nup35	100	64.610	Danio_rerio
ENSCSEG00000000938	nup35	99	57.143	ENSDNOG00000038754	-	96	57.143	Dasypus_novemcinctus
ENSCSEG00000000938	nup35	99	57.764	ENSDNOG00000009513	-	85	57.764	Dasypus_novemcinctus
ENSCSEG00000000938	nup35	99	58.934	ENSDORG00000010458	-	97	59.177	Dipodomys_ordii
ENSCSEG00000000938	nup35	98	58.544	ENSETEG00000005896	NUP35	99	58.544	Echinops_telfairi
ENSCSEG00000000938	nup35	98	51.988	ENSEBUG00000013034	nup35	99	52.905	Eptatretus_burgeri
ENSCSEG00000000938	nup35	99	59.248	ENSEASG00005022100	NUP35	96	59.248	Equus_asinus_asinus
ENSCSEG00000000938	nup35	99	59.190	ENSECAG00000003968	NUP35	100	59.554	Equus_caballus
ENSCSEG00000000938	nup35	99	50.625	ENSEEUG00000008469	NUP35	97	50.625	Erinaceus_europaeus
ENSCSEG00000000938	nup35	100	65.312	ENSELUG00000013693	nup35	100	65.312	Esox_lucius
ENSCSEG00000000938	nup35	99	56.875	ENSFCAG00000025636	NUP35	100	57.911	Felis_catus
ENSCSEG00000000938	nup35	100	57.585	ENSFALG00000013175	NUP35	98	57.585	Ficedula_albicollis
ENSCSEG00000000938	nup35	99	59.375	ENSFDAG00000017998	NUP35	96	59.375	Fukomys_damarensis
ENSCSEG00000000938	nup35	100	80.602	ENSFHEG00000010229	nup35	100	81.605	Fundulus_heteroclitus
ENSCSEG00000000938	nup35	78	69.915	ENSGMOG00000003337	nup35	100	69.915	Gadus_morhua
ENSCSEG00000000938	nup35	98	58.360	ENSGALG00000002689	NUP35	97	58.360	Gallus_gallus
ENSCSEG00000000938	nup35	100	79.333	ENSGAFG00000022048	nup35	100	81.000	Gambusia_affinis
ENSCSEG00000000938	nup35	100	76.846	ENSGACG00000008203	nup35	100	79.195	Gasterosteus_aculeatus
ENSCSEG00000000938	nup35	97	61.146	ENSGAGG00000001967	NUP35	100	61.146	Gopherus_agassizii
ENSCSEG00000000938	nup35	99	58.934	ENSGGOG00000009919	NUP35	96	58.934	Gorilla_gorilla
ENSCSEG00000000938	nup35	98	43.730	ENSHGLG00000000414	-	97	43.730	Heterocephalus_glaber_female
ENSCSEG00000000938	nup35	92	49.169	ENSHGLG00000008616	-	90	50.512	Heterocephalus_glaber_female
ENSCSEG00000000938	nup35	99	58.879	ENSHGLG00000013230	NUP35	96	58.879	Heterocephalus_glaber_female
ENSCSEG00000000938	nup35	98	43.730	ENSHGLG00100010869	-	97	43.730	Heterocephalus_glaber_male
ENSCSEG00000000938	nup35	99	58.879	ENSHGLG00100012840	NUP35	96	58.879	Heterocephalus_glaber_male
ENSCSEG00000000938	nup35	92	49.169	ENSHGLG00100000091	-	91	50.512	Heterocephalus_glaber_male
ENSCSEG00000000938	nup35	100	78.523	ENSHCOG00000003882	nup35	100	78.523	Hippocampus_comes
ENSCSEG00000000938	nup35	100	63.578	ENSIPUG00000002798	nup35	100	63.578	Ictalurus_punctatus
ENSCSEG00000000938	nup35	99	58.805	ENSSTOG00000000711	NUP35	96	58.805	Ictidomys_tridecemlineatus
ENSCSEG00000000938	nup35	100	55.911	ENSJJAG00000007003	-	97	55.911	Jaculus_jaculus
ENSCSEG00000000938	nup35	85	53.818	ENSJJAG00000006387	-	91	53.818	Jaculus_jaculus
ENSCSEG00000000938	nup35	98	53.165	ENSJJAG00000017434	-	96	53.165	Jaculus_jaculus
ENSCSEG00000000938	nup35	99	58.991	ENSJJAG00000016432	-	97	59.177	Jaculus_jaculus
ENSCSEG00000000938	nup35	100	78.073	ENSKMAG00000011162	nup35	100	79.070	Kryptolebias_marmoratus
ENSCSEG00000000938	nup35	99	63.390	ENSLBEG00000012416	nup35	99	63.390	Labrus_bergylta
ENSCSEG00000000938	nup35	97	60.625	ENSLACG00000008247	NUP35	100	60.625	Latimeria_chalumnae
ENSCSEG00000000938	nup35	100	63.636	ENSLOCG00000006726	nup35	100	63.636	Lepisosteus_oculatus
ENSCSEG00000000938	nup35	99	57.812	ENSLAFG00000008155	NUP35	96	57.812	Loxodonta_africana
ENSCSEG00000000938	nup35	99	58.307	ENSMFAG00000000834	NUP35	100	58.280	Macaca_fascicularis
ENSCSEG00000000938	nup35	99	58.621	ENSMMUG00000004140	NUP35	99	58.861	Macaca_mulatta
ENSCSEG00000000938	nup35	99	58.621	ENSMNEG00000029014	NUP35	96	58.621	Macaca_nemestrina
ENSCSEG00000000938	nup35	99	58.621	ENSMLEG00000035422	NUP35	100	58.599	Mandrillus_leucophaeus
ENSCSEG00000000938	nup35	100	79.933	ENSMAMG00000013232	nup35	100	80.268	Mastacembelus_armatus
ENSCSEG00000000938	nup35	99	78.073	ENSMZEG00005020619	nup35	98	78.986	Maylandia_zebra
ENSCSEG00000000938	nup35	97	57.827	ENSMGAG00000004412	NUP35	95	57.827	Meleagris_gallopavo
ENSCSEG00000000938	nup35	99	59.119	ENSMAUG00000013776	-	96	59.119	Mesocricetus_auratus
ENSCSEG00000000938	nup35	99	58.307	ENSMICG00000006790	NUP35	100	58.917	Microcebus_murinus
ENSCSEG00000000938	nup35	99	59.561	ENSMOCG00000014754	-	96	59.561	Microtus_ochrogaster
ENSCSEG00000000938	nup35	100	75.585	ENSMMOG00000005026	nup35	100	75.585	Mola_mola
ENSCSEG00000000938	nup35	99	61.635	ENSMODG00000010578	NUP35	96	61.635	Monodelphis_domestica
ENSCSEG00000000938	nup35	100	80.936	ENSMALG00000020187	nup35	100	80.936	Monopterus_albus
ENSCSEG00000000938	nup35	99	57.862	MGP_CAROLIEiJ_G0023709	-	96	57.862	Mus_caroli
ENSCSEG00000000938	nup35	99	57.547	ENSMUSG00000026999	Nup35	96	57.547	Mus_musculus
ENSCSEG00000000938	nup35	99	57.862	MGP_PahariEiJ_G0025160	-	96	57.862	Mus_pahari
ENSCSEG00000000938	nup35	78	50.690	MGP_SPRETEiJ_G0033063	-	97	50.690	Mus_spretus
ENSCSEG00000000938	nup35	99	57.453	ENSMPUG00000002063	NUP35	96	58.696	Mustela_putorius_furo
ENSCSEG00000000938	nup35	99	59.248	ENSMLUG00000013154	NUP35	96	59.248	Myotis_lucifugus
ENSCSEG00000000938	nup35	99	57.812	ENSNGAG00000012107	-	96	57.812	Nannospalax_galili
ENSCSEG00000000938	nup35	100	77.592	ENSNBRG00000020466	nup35	98	79.264	Neolamprologus_brichardi
ENSCSEG00000000938	nup35	99	58.934	ENSNLEG00000035026	NUP35	100	58.917	Nomascus_leucogenys
ENSCSEG00000000938	nup35	58	45.055	ENSMEUG00000003001	-	55	45.055	Notamacropus_eugenii
ENSCSEG00000000938	nup35	78	58.527	ENSOPRG00000016609	NUP35	78	58.527	Ochotona_princeps
ENSCSEG00000000938	nup35	99	58.176	ENSODEG00000011202	-	97	57.812	Octodon_degus
ENSCSEG00000000938	nup35	98	43.421	ENSODEG00000000280	-	95	43.421	Octodon_degus
ENSCSEG00000000938	nup35	100	80.399	ENSONIG00000016251	nup35	100	81.063	Oreochromis_niloticus
ENSCSEG00000000938	nup35	74	60.833	ENSOANG00000006793	-	97	60.833	Ornithorhynchus_anatinus
ENSCSEG00000000938	nup35	99	59.561	ENSOCUG00000014407	NUP35	96	59.561	Oryctolagus_cuniculus
ENSCSEG00000000938	nup35	100	79.599	ENSORLG00000013588	nup35	100	79.599	Oryzias_latipes
ENSCSEG00000000938	nup35	100	79.599	ENSORLG00020008201	nup35	100	79.599	Oryzias_latipes_hni
ENSCSEG00000000938	nup35	100	79.599	ENSORLG00015011096	nup35	100	79.599	Oryzias_latipes_hsok
ENSCSEG00000000938	nup35	100	80.268	ENSOMEG00000007628	nup35	100	80.268	Oryzias_melastigma
ENSCSEG00000000938	nup35	99	59.062	ENSOGAG00000011920	NUP35	96	59.688	Otolemur_garnettii
ENSCSEG00000000938	nup35	99	58.621	ENSOARG00000016728	NUP35	96	58.621	Ovis_aries
ENSCSEG00000000938	nup35	99	58.934	ENSPPAG00000036316	NUP35	100	58.917	Pan_paniscus
ENSCSEG00000000938	nup35	99	57.188	ENSPPRG00000024726	NUP35	100	58.228	Panthera_pardus
ENSCSEG00000000938	nup35	99	57.188	ENSPTIG00000017299	NUP35	96	58.255	Panthera_tigris_altaica
ENSCSEG00000000938	nup35	99	58.934	ENSPTRG00000012711	NUP35	100	58.917	Pan_troglodytes
ENSCSEG00000000938	nup35	99	58.621	ENSPANG00000013686	NUP35	96	58.621	Papio_anubis
ENSCSEG00000000938	nup35	100	64.890	ENSPKIG00000022051	nup35	100	64.890	Paramormyrops_kingsleyae
ENSCSEG00000000938	nup35	97	61.022	ENSPSIG00000002146	NUP35	100	61.022	Pelodiscus_sinensis
ENSCSEG00000000938	nup35	97	67.559	ENSPMGG00000022915	nup35	97	69.767	Periophthalmus_magnuspinnatus
ENSCSEG00000000938	nup35	99	59.248	ENSPEMG00000014718	-	96	59.248	Peromyscus_maniculatus_bairdii
ENSCSEG00000000938	nup35	99	53.517	ENSPMAG00000006604	nup35	98	53.517	Petromyzon_marinus
ENSCSEG00000000938	nup35	99	60.000	ENSPCIG00000015482	NUP35	96	60.000	Phascolarctos_cinereus
ENSCSEG00000000938	nup35	100	79.333	ENSPFOG00000010020	nup35	100	81.000	Poecilia_formosa
ENSCSEG00000000938	nup35	100	79.000	ENSPLAG00000005867	nup35	100	80.667	Poecilia_latipinna
ENSCSEG00000000938	nup35	100	79.333	ENSPMEG00000010552	nup35	100	81.000	Poecilia_mexicana
ENSCSEG00000000938	nup35	100	78.261	ENSPREG00000021005	nup35	100	78.930	Poecilia_reticulata
ENSCSEG00000000938	nup35	98	59.306	ENSPPYG00000012998	-	77	59.306	Pongo_abelii
ENSCSEG00000000938	nup35	98	43.312	ENSPCAG00000000605	NUP35	95	43.312	Procavia_capensis
ENSCSEG00000000938	nup35	99	58.621	ENSPCOG00000024097	NUP35	96	59.062	Propithecus_coquereli
ENSCSEG00000000938	nup35	99	58.934	ENSPVAG00000015908	NUP35	96	58.934	Pteropus_vampyrus
ENSCSEG00000000938	nup35	99	79.461	ENSPNYG00000012486	nup35	96	79.461	Pundamilia_nyererei
ENSCSEG00000000938	nup35	99	67.093	ENSPNAG00000005181	nup35	98	67.093	Pygocentrus_nattereri
ENSCSEG00000000938	nup35	99	58.805	ENSRNOG00000009290	Nup35	96	58.805	Rattus_norvegicus
ENSCSEG00000000938	nup35	99	58.621	ENSRBIG00000039427	NUP35	100	58.599	Rhinopithecus_bieti
ENSCSEG00000000938	nup35	99	58.621	ENSRROG00000026525	NUP35	91	66.484	Rhinopithecus_roxellana
ENSCSEG00000000938	nup35	99	58.621	ENSSBOG00000018676	NUP35	91	65.574	Saimiri_boliviensis_boliviensis
ENSCSEG00000000938	nup35	99	59.248	ENSSHAG00000009746	NUP35	96	59.248	Sarcophilus_harrisii
ENSCSEG00000000938	nup35	100	64.151	ENSSFOG00015002390	nup35	100	64.151	Scleropages_formosus
ENSCSEG00000000938	nup35	100	79.801	ENSSMAG00000015651	nup35	100	79.801	Scophthalmus_maximus
ENSCSEG00000000938	nup35	100	80.602	ENSSDUG00000013118	nup35	100	82.943	Seriola_dumerili
ENSCSEG00000000938	nup35	99	79.322	ENSSLDG00000018249	nup35	98	82.034	Seriola_lalandi_dorsalis
ENSCSEG00000000938	nup35	98	44.136	ENSSARG00000001535	-	99	44.136	Sorex_araneus
ENSCSEG00000000938	nup35	99	59.813	ENSSPUG00000018651	NUP35	97	59.813	Sphenodon_punctatus
ENSCSEG00000000938	nup35	100	78.261	ENSSPAG00000018264	nup35	100	80.268	Stegastes_partitus
ENSCSEG00000000938	nup35	99	58.750	ENSSSCG00000028949	NUP35	96	58.750	Sus_scrofa
ENSCSEG00000000938	nup35	99	58.204	ENSTGUG00000011278	NUP35	98	58.204	Taeniopygia_guttata
ENSCSEG00000000938	nup35	93	71.223	ENSTRUG00000014111	nup35	100	71.223	Takifugu_rubripes
ENSCSEG00000000938	nup35	99	65.306	ENSTNIG00000011568	nup35	95	65.306	Tetraodon_nigroviridis
ENSCSEG00000000938	nup35	99	56.698	ENSTBEG00000003328	NUP35	96	56.698	Tupaia_belangeri
ENSCSEG00000000938	nup35	99	53.443	ENSTTRG00000002512	NUP35	96	53.443	Tursiops_truncatus
ENSCSEG00000000938	nup35	58	64.835	ENSUAMG00000018696	-	88	64.835	Ursus_americanus
ENSCSEG00000000938	nup35	91	54.545	ENSUMAG00000017104	NUP35	96	55.705	Ursus_maritimus
ENSCSEG00000000938	nup35	99	59.062	ENSVPAG00000011898	NUP35	96	59.062	Vicugna_pacos
ENSCSEG00000000938	nup35	97	58.360	ENSVVUG00000016832	NUP35	100	58.360	Vulpes_vulpes
ENSCSEG00000000938	nup35	98	53.774	ENSXETG00000001335	nup35	98	51.376	Xenopus_tropicalis
ENSCSEG00000000938	nup35	100	79.667	ENSXMAG00000000409	nup35	100	81.333	Xiphophorus_maculatus