Description
Ensembl ID
ENSCSEG00000001142 (Gene tree)
Gene ID
103378657
Gene Symbol
pabpn1l
Alias
ePABP2
Full Name
poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
2901 bases
Position
chr5:3592578-3595478
Accession
103378657
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSCSEP00000001694RRM_1PF00076.222.1e-1511
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSCSET00000001725-1233-ENSCSEP00000001694260 (aa)-I6LKQ7
Pathways
Pathway ID
Pathway Name
Source
csem03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID
Gene Symbol
Coverage
Identiy
Paralog
Gene Symbol
Coverage
Identiy
ENSCSEG00000001142pabpn1l7457.513ENSCSEG00000008774pabpn16562.420
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSCSEG00000001142pabpn1l7252.308ENSG00000205022PABPN1L5853.988Homo_sapiens
ENSCSEG00000001142pabpn1l9085.833ENSAPOG00000000685PABPN1L7885.833Acanthochromis_polyacanthus
ENSCSEG00000001142pabpn1l9085.106ENSACIG00000021400PABPN1L9885.106Amphilophus_citrinellus
ENSCSEG00000001142pabpn1l10085.227ENSAOCG00000019844PABPN1L10085.227Amphiprion_ocellaris
ENSCSEG00000001142pabpn1l10084.848ENSAPEG00000019534PABPN1L10084.848Amphiprion_percula
ENSCSEG00000001142pabpn1l9086.975ENSATEG00000011646PABPN1L9586.975Anabas_testudineus
ENSCSEG00000001142pabpn1l6559.064ENSACAG00000013250PABPN1L7461.702Anolis_carolinensis
ENSCSEG00000001142pabpn1l7252.083ENSANAG00000038178PABPN1L5853.704Aotus_nancymaae
ENSCSEG00000001142pabpn1l10084.351ENSACLG00000025147PABPN1L10084.351Astatotilapia_calliptera
ENSCSEG00000001142pabpn1l5471.631ENSAMXG00000010873PABPN1L5570.213Astyanax_mexicanus
ENSCSEG00000001142pabpn1l7153.535ENSCJAG00000045284PABPN1L6054.878Callithrix_jacchus
ENSCSEG00000001142pabpn1l6649.162ENSCPOG00000025951PABPN1L5551.656Cavia_porcellus
ENSCSEG00000001142pabpn1l7552.941ENSCCAG00000027631PABPN1L5854.878Cebus_capucinus
ENSCSEG00000001142pabpn1l10082.197ENSCVAG00000015547PABPN1L10082.955Cyprinodon_variegatus
ENSCSEG00000001142pabpn1l6051.899ENSDNOG00000034677PABPN1L6051.899Dasypus_novemcinctus
ENSCSEG00000001142pabpn1l6751.381ENSEASG00005000777PABPN1L5753.642Equus_asinus_asinus
ENSCSEG00000001142pabpn1l7249.246ENSECAG00000000378PABPN1L6151.479Equus_caballus
ENSCSEG00000001142pabpn1l9566.129ENSELUG00000018385PABPN1L9565.587Esox_lucius
ENSCSEG00000001142pabpn1l6253.179ENSFCAG00000010465PABPN1L5952.096Felis_catus
ENSCSEG00000001142pabpn1l6459.524ENSFALG00000003319PABPN1L6260.667Ficedula_albicollis
ENSCSEG00000001142pabpn1l10082.129ENSFHEG00000018295PABPN1L10082.129Fundulus_heteroclitus
ENSCSEG00000001142pabpn1l10070.787ENSGMOG00000001475PABPN1L10068.914Gadus_morhua
ENSCSEG00000001142pabpn1l7052.717ENSGALG00000006242PABPN1L7454.487Gallus_gallus
ENSCSEG00000001142pabpn1l10081.818ENSGAFG00000012565PABPN1L10082.576Gambusia_affinis
ENSCSEG00000001142pabpn1l10077.122ENSGACG00000015428PABPN1L10078.731Gasterosteus_aculeatus
ENSCSEG00000001142pabpn1l7252.551ENSGGOG00000012670PABPN1L5953.988Gorilla_gorilla
ENSCSEG00000001142pabpn1l10084.030ENSHBUG00000002388PABPN1L10084.030Haplochromis_burtoni
ENSCSEG00000001142pabpn1l10079.926ENSHCOG00000004151PABPN1L9979.926Hippocampus_comes
ENSCSEG00000001142pabpn1l7061.538ENSIPUG00000023583PABPN1L7367.347Ictalurus_punctatus
ENSCSEG00000001142pabpn1l7548.341ENSJJAG00000006433Pabpn1l6349.123Jaculus_jaculus
ENSCSEG00000001142pabpn1l8185.782ENSKMAG00000001112PABPN1L9783.636Kryptolebias_marmoratus
ENSCSEG00000001142pabpn1l10080.827ENSLBEG00000011647PABPN1L9782.331Labrus_bergylta
ENSCSEG00000001142pabpn1l6054.037ENSLAFG00000025902-5853.793Loxodonta_africana
ENSCSEG00000001142pabpn1l10084.351ENSMZEG00005002186PABPN1L10084.351Maylandia_zebra
ENSCSEG00000001142pabpn1l7689.899ENSMMOG00000017714PABPN1L8689.899Mola_mola
ENSCSEG00000001142pabpn1l7248.223ENSMODG00000003873-6149.701Monodelphis_domestica
ENSCSEG00000001142pabpn1l10082.510ENSMALG00000016926PABPN1L10082.510Monopterus_albus
ENSCSEG00000001142pabpn1l9086.076ENSNBRG00000017078PABPN1L10086.076Neolamprologus_brichardi
ENSCSEG00000001142pabpn1l6555.621ENSOANG00000013901PABPN1L6054.487Ornithorhynchus_anatinus
ENSCSEG00000001142pabpn1l10077.692ENSORLG00000026560PABPN1L10077.692Oryzias_latipes
ENSCSEG00000001142pabpn1l10077.308ENSORLG00020015068PABPN1L10077.308Oryzias_latipes_hni
ENSCSEG00000001142pabpn1l10077.692ENSORLG00015000397PABPN1L10077.692Oryzias_latipes_hsok
ENSCSEG00000001142pabpn1l10075.758ENSOMEG00000017896PABPN1L7275.758Oryzias_melastigma
ENSCSEG00000001142pabpn1l6952.151ENSOGAG00000000433PABPN1L5052.318Otolemur_garnettii
ENSCSEG00000001142pabpn1l7252.308ENSPPAG00000028866PABPN1L5853.988Pan_paniscus
ENSCSEG00000001142pabpn1l6252.601ENSPPRG00000015106PABPN1L5951.497Panthera_pardus
ENSCSEG00000001142pabpn1l6254.601ENSPTIG00000015606PABPN1L6153.503Panthera_tigris_altaica
ENSCSEG00000001142pabpn1l7252.308ENSPTRG00000031120PABPN1L5853.988Pan_troglodytes
ENSCSEG00000001142pabpn1l6064.596ENSPSIG00000003404PABPN1L7663.889Pelodiscus_sinensis
ENSCSEG00000001142pabpn1l8184.360ENSPMGG00000013927PABPN1L9782.273Periophthalmus_magnuspinnatus
ENSCSEG00000001142pabpn1l10082.197ENSPFOG00000007001PABPN1L10082.955Poecilia_formosa
ENSCSEG00000001142pabpn1l10082.197ENSPLAG00000018431PABPN1L10082.955Poecilia_latipinna
ENSCSEG00000001142pabpn1l6781.461ENSPMEG00000000169-8881.461Poecilia_mexicana
ENSCSEG00000001142pabpn1l10082.197ENSPMEG00000009108PABPN1L10082.955Poecilia_mexicana
ENSCSEG00000001142pabpn1l8186.256ENSPREG00000022533PABPN1L10085.281Poecilia_reticulata
ENSCSEG00000001142pabpn1l7251.813ENSPPYG00000007655PABPN1L5853.374Pongo_abelii
ENSCSEG00000001142pabpn1l7250.510ENSPVAG00000002716PABPN1L5952.439Pteropus_vampyrus
ENSCSEG00000001142pabpn1l10084.351ENSPNYG00000004803PABPN1L10084.351Pundamilia_nyererei
ENSCSEG00000001142pabpn1l7551.471ENSRBIG00000030740PABPN1L5952.761Rhinopithecus_bieti
ENSCSEG00000001142pabpn1l7150.246ENSRROG00000032240-5952.761Rhinopithecus_roxellana
ENSCSEG00000001142pabpn1l7253.093ENSSBOG00000018410PABPN1L5854.268Saimiri_boliviensis_boliviensis
ENSCSEG00000001142pabpn1l6352.841ENSSHAG00000010001-5453.896Sarcophilus_harrisii
ENSCSEG00000001142pabpn1l10083.521ENSSMAG00000021348PABPN1L10081.648Scophthalmus_maximus
ENSCSEG00000001142pabpn1l10086.742ENSSDUG00000006986PABPN1L10086.742Seriola_dumerili
ENSCSEG00000001142pabpn1l10086.364ENSSLDG00000021845PABPN1L10086.364Seriola_lalandi_dorsalis
ENSCSEG00000001142pabpn1l5663.014ENSSPUG00000007031PABPN1L6359.574Sphenodon_punctatus
ENSCSEG00000001142pabpn1l10085.227ENSSPAG00000017978PABPN1L10084.848Stegastes_partitus
ENSCSEG00000001142pabpn1l7047.917ENSSSCG00000036367PABPN1L6347.159Sus_scrofa
ENSCSEG00000001142pabpn1l10075.285ENSTRUG00000024725PABPN1L10075.285Takifugu_rubripes
ENSCSEG00000001142pabpn1l7490.104ENSTNIG00000009416PABPN1L10090.104Tetraodon_nigroviridis
ENSCSEG00000001142pabpn1l6453.039ENSXETG00000011258pabpn1l8251.934Xenopus_tropicalis
ENSCSEG00000001142pabpn1l8086.473ENSXCOG00000003254PABPN1L10084.416Xiphophorus_couchianus
ENSCSEG00000001142pabpn1l7984.466ENSXMAG00000029090PABPN1L9781.944Xiphophorus_maculatus