EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001247 (Gene tree)
Gene ID: 103383403
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2752 bases
Position: chr9:3275147-3277898
Accession: 103383403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001836	RNA_pol_Rpc34	PF05158.12	4.8e-97	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001868	-	951	XM_008316500	ENSCSEP00000001836	316 (aa)	XP_008314722	UPI0004979A74

Gene Model

Click here to download ENSCSEG00000001247's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03020	RNA polymerase	KEGG
csem04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001247	polr3f	100	84.810	ENSG00000132664	POLR3F	100	84.810	Homo_sapiens
ENSCSEG00000001247	polr3f	100	93.354	ENSAPOG00000008271	polr3f	100	93.354	Acanthochromis_polyacanthus
ENSCSEG00000001247	polr3f	100	84.494	ENSAMEG00000005222	POLR3F	100	84.494	Ailuropoda_melanoleuca
ENSCSEG00000001247	polr3f	100	84.810	ENSACIG00000006705	polr3f	100	85.127	Amphilophus_citrinellus
ENSCSEG00000001247	polr3f	100	92.722	ENSAOCG00000000687	polr3f	100	92.722	Amphiprion_ocellaris
ENSCSEG00000001247	polr3f	100	92.405	ENSAPEG00000015263	polr3f	100	92.405	Amphiprion_percula
ENSCSEG00000001247	polr3f	87	94.182	ENSATEG00000015539	polr3f	100	94.182	Anabas_testudineus
ENSCSEG00000001247	polr3f	87	87.273	ENSAPLG00000005533	POLR3F	100	87.273	Anas_platyrhynchos
ENSCSEG00000001247	polr3f	97	86.039	ENSACAG00000014293	POLR3F	99	86.039	Anolis_carolinensis
ENSCSEG00000001247	polr3f	100	84.810	ENSANAG00000026726	POLR3F	100	84.810	Aotus_nancymaae
ENSCSEG00000001247	polr3f	100	93.038	ENSACLG00000003615	polr3f	100	93.038	Astatotilapia_calliptera
ENSCSEG00000001247	polr3f	100	88.608	ENSAMXG00000036020	polr3f	100	88.608	Astyanax_mexicanus
ENSCSEG00000001247	polr3f	100	84.177	ENSBTAG00000008825	POLR3F	100	84.177	Bos_taurus
ENSCSEG00000001247	polr3f	98	33.546	WBGene00021112	W09C3.4	98	33.546	Caenorhabditis_elegans
ENSCSEG00000001247	polr3f	100	84.810	ENSCJAG00000005159	POLR3F	100	84.810	Callithrix_jacchus
ENSCSEG00000001247	polr3f	100	84.810	ENSCAFG00000005420	POLR3F	100	84.810	Canis_familiaris
ENSCSEG00000001247	polr3f	100	84.810	ENSCAFG00020027500	POLR3F	100	84.810	Canis_lupus_dingo
ENSCSEG00000001247	polr3f	100	84.177	ENSCHIG00000014743	POLR3F	100	84.177	Capra_hircus
ENSCSEG00000001247	polr3f	100	84.494	ENSTSYG00000004207	POLR3F	100	84.494	Carlito_syrichta
ENSCSEG00000001247	polr3f	93	46.959	ENSCAPG00000008423	POLR3F	100	70.779	Cavia_aperea
ENSCSEG00000001247	polr3f	100	84.177	ENSCPOG00000002400	POLR3F	100	84.177	Cavia_porcellus
ENSCSEG00000001247	polr3f	100	75.000	ENSCCAG00000021800	POLR3F	100	75.000	Cebus_capucinus
ENSCSEG00000001247	polr3f	100	84.494	ENSCATG00000019507	POLR3F	100	84.494	Cercocebus_atys
ENSCSEG00000001247	polr3f	100	84.494	ENSCLAG00000016296	POLR3F	100	84.494	Chinchilla_lanigera
ENSCSEG00000001247	polr3f	100	84.494	ENSCSAG00000011513	POLR3F	100	84.494	Chlorocebus_sabaeus
ENSCSEG00000001247	polr3f	73	84.270	ENSCHOG00000013268	POLR3F	73	84.270	Choloepus_hoffmanni
ENSCSEG00000001247	polr3f	87	87.636	ENSCPBG00000023473	POLR3F	100	87.636	Chrysemys_picta_bellii
ENSCSEG00000001247	polr3f	99	59.048	ENSCING00000001212	-	99	59.048	Ciona_intestinalis
ENSCSEG00000001247	polr3f	68	61.111	ENSCSAVG00000003340	-	96	63.905	Ciona_savignyi
ENSCSEG00000001247	polr3f	92	84.536	ENSCANG00000037390	POLR3F	100	84.536	Colobus_angolensis_palliatus
ENSCSEG00000001247	polr3f	100	83.544	ENSCGRG00001002032	Polr3f	100	83.544	Cricetulus_griseus_chok1gshd
ENSCSEG00000001247	polr3f	100	83.544	ENSCGRG00000010852	Polr3f	100	83.544	Cricetulus_griseus_crigri
ENSCSEG00000001247	polr3f	100	89.873	ENSCVAG00000007611	polr3f	100	89.873	Cyprinodon_variegatus
ENSCSEG00000001247	polr3f	100	89.873	ENSDARG00000012572	polr3f	100	89.873	Danio_rerio
ENSCSEG00000001247	polr3f	100	81.646	ENSDNOG00000010719	POLR3F	100	81.646	Dasypus_novemcinctus
ENSCSEG00000001247	polr3f	100	84.494	ENSDORG00000016352	Polr3f	100	84.494	Dipodomys_ordii
ENSCSEG00000001247	polr3f	95	49.834	FBgn0038951	CG5380	99	49.834	Drosophila_melanogaster
ENSCSEG00000001247	polr3f	88	50.896	ENSETEG00000015485	-	99	50.896	Echinops_telfairi
ENSCSEG00000001247	polr3f	96	76.238	ENSEBUG00000006783	polr3f	97	76.238	Eptatretus_burgeri
ENSCSEG00000001247	polr3f	100	84.810	ENSEASG00005002022	POLR3F	100	84.810	Equus_asinus_asinus
ENSCSEG00000001247	polr3f	100	84.810	ENSECAG00000009920	POLR3F	100	84.810	Equus_caballus
ENSCSEG00000001247	polr3f	80	88.000	ENSEEUG00000000184	POLR3F	80	88.000	Erinaceus_europaeus
ENSCSEG00000001247	polr3f	100	89.873	ENSELUG00000001558	polr3f	100	89.873	Esox_lucius
ENSCSEG00000001247	polr3f	100	84.494	ENSFCAG00000013828	POLR3F	100	84.494	Felis_catus
ENSCSEG00000001247	polr3f	87	88.364	ENSFALG00000007623	POLR3F	100	88.364	Ficedula_albicollis
ENSCSEG00000001247	polr3f	100	84.177	ENSFDAG00000002528	POLR3F	100	84.177	Fukomys_damarensis
ENSCSEG00000001247	polr3f	100	91.139	ENSFHEG00000006450	polr3f	100	91.139	Fundulus_heteroclitus
ENSCSEG00000001247	polr3f	100	85.127	ENSGALG00000008749	POLR3F	100	85.127	Gallus_gallus
ENSCSEG00000001247	polr3f	100	91.456	ENSGAFG00000003698	polr3f	100	91.456	Gambusia_affinis
ENSCSEG00000001247	polr3f	100	85.443	ENSGAGG00000006151	POLR3F	100	85.443	Gopherus_agassizii
ENSCSEG00000001247	polr3f	100	84.810	ENSGGOG00000011543	POLR3F	100	84.810	Gorilla_gorilla
ENSCSEG00000001247	polr3f	100	93.354	ENSHBUG00000013806	polr3f	100	93.354	Haplochromis_burtoni
ENSCSEG00000001247	polr3f	100	84.177	ENSHGLG00000011867	POLR3F	100	84.177	Heterocephalus_glaber_female
ENSCSEG00000001247	polr3f	100	84.177	ENSHGLG00100012577	POLR3F	100	84.177	Heterocephalus_glaber_male
ENSCSEG00000001247	polr3f	100	80.696	ENSHCOG00000011751	polr3f	100	80.696	Hippocampus_comes
ENSCSEG00000001247	polr3f	100	88.291	ENSIPUG00000013347	polr3f	100	88.291	Ictalurus_punctatus
ENSCSEG00000001247	polr3f	100	84.494	ENSSTOG00000013588	POLR3F	100	84.494	Ictidomys_tridecemlineatus
ENSCSEG00000001247	polr3f	100	83.861	ENSJJAG00000017513	Polr3f	100	83.861	Jaculus_jaculus
ENSCSEG00000001247	polr3f	87	86.182	ENSKMAG00000016495	polr3f	100	86.182	Kryptolebias_marmoratus
ENSCSEG00000001247	polr3f	73	95.259	ENSLBEG00000011998	polr3f	100	95.259	Labrus_bergylta
ENSCSEG00000001247	polr3f	100	85.443	ENSLACG00000009371	POLR3F	100	85.443	Latimeria_chalumnae
ENSCSEG00000001247	polr3f	100	88.608	ENSLOCG00000015701	polr3f	100	88.608	Lepisosteus_oculatus
ENSCSEG00000001247	polr3f	100	84.177	ENSLAFG00000004929	POLR3F	100	84.177	Loxodonta_africana
ENSCSEG00000001247	polr3f	100	84.494	ENSMFAG00000002227	POLR3F	100	84.494	Macaca_fascicularis
ENSCSEG00000001247	polr3f	87	87.636	ENSMMUG00000004143	POLR3F	100	87.636	Macaca_mulatta
ENSCSEG00000001247	polr3f	100	84.494	ENSMNEG00000033404	POLR3F	100	84.494	Macaca_nemestrina
ENSCSEG00000001247	polr3f	100	84.494	ENSMLEG00000021905	POLR3F	100	84.494	Mandrillus_leucophaeus
ENSCSEG00000001247	polr3f	100	91.772	ENSMAMG00000017975	polr3f	100	91.772	Mastacembelus_armatus
ENSCSEG00000001247	polr3f	100	93.038	ENSMZEG00005015134	polr3f	100	93.038	Maylandia_zebra
ENSCSEG00000001247	polr3f	100	85.759	ENSMGAG00000006691	POLR3F	100	85.759	Meleagris_gallopavo
ENSCSEG00000001247	polr3f	100	83.861	ENSMAUG00000020176	Polr3f	100	83.861	Mesocricetus_auratus
ENSCSEG00000001247	polr3f	100	84.494	ENSMICG00000044519	POLR3F	100	84.494	Microcebus_murinus
ENSCSEG00000001247	polr3f	100	84.177	ENSMOCG00000018352	Polr3f	100	84.177	Microtus_ochrogaster
ENSCSEG00000001247	polr3f	93	91.919	ENSMMOG00000018477	polr3f	100	91.919	Mola_mola
ENSCSEG00000001247	polr3f	100	84.810	ENSMODG00000005624	POLR3F	100	84.810	Monodelphis_domestica
ENSCSEG00000001247	polr3f	100	91.772	ENSMALG00000006685	polr3f	100	91.772	Monopterus_albus
ENSCSEG00000001247	polr3f	100	83.544	MGP_CAROLIEiJ_G0024385	Polr3f	100	83.544	Mus_caroli
ENSCSEG00000001247	polr3f	100	83.544	ENSMUSG00000027427	Polr3f	100	83.544	Mus_musculus
ENSCSEG00000001247	polr3f	100	83.544	MGP_PahariEiJ_G0025829	Polr3f	100	83.544	Mus_pahari
ENSCSEG00000001247	polr3f	100	83.544	MGP_SPRETEiJ_G0025304	Polr3f	100	83.544	Mus_spretus
ENSCSEG00000001247	polr3f	100	63.385	ENSMPUG00000001252	-	100	63.385	Mustela_putorius_furo
ENSCSEG00000001247	polr3f	100	84.494	ENSMLUG00000014844	POLR3F	100	84.494	Myotis_lucifugus
ENSCSEG00000001247	polr3f	100	83.228	ENSNGAG00000010898	Polr3f	100	83.228	Nannospalax_galili
ENSCSEG00000001247	polr3f	100	93.038	ENSNBRG00000020796	polr3f	100	93.038	Neolamprologus_brichardi
ENSCSEG00000001247	polr3f	100	84.810	ENSNLEG00000009778	POLR3F	100	84.810	Nomascus_leucogenys
ENSCSEG00000001247	polr3f	93	81.017	ENSMEUG00000010320	POLR3F	100	81.017	Notamacropus_eugenii
ENSCSEG00000001247	polr3f	100	83.228	ENSOPRG00000003385	POLR3F	100	83.228	Ochotona_princeps
ENSCSEG00000001247	polr3f	100	84.810	ENSODEG00000011521	POLR3F	100	84.810	Octodon_degus
ENSCSEG00000001247	polr3f	100	91.139	ENSONIG00000006858	polr3f	100	91.139	Oreochromis_niloticus
ENSCSEG00000001247	polr3f	100	84.177	ENSOANG00000001253	POLR3F	100	84.177	Ornithorhynchus_anatinus
ENSCSEG00000001247	polr3f	100	84.494	ENSOCUG00000015067	POLR3F	100	84.494	Oryctolagus_cuniculus
ENSCSEG00000001247	polr3f	100	89.557	ENSORLG00000022412	polr3f	100	89.557	Oryzias_latipes
ENSCSEG00000001247	polr3f	100	89.557	ENSORLG00020021944	polr3f	100	89.557	Oryzias_latipes_hni
ENSCSEG00000001247	polr3f	100	83.544	ENSOGAG00000002916	POLR3F	100	83.544	Otolemur_garnettii
ENSCSEG00000001247	polr3f	100	84.177	ENSOARG00000000315	-	100	84.177	Ovis_aries
ENSCSEG00000001247	polr3f	100	50.316	ENSOARG00000008647	-	100	48.734	Ovis_aries
ENSCSEG00000001247	polr3f	100	84.810	ENSPPAG00000036681	POLR3F	100	84.810	Pan_paniscus
ENSCSEG00000001247	polr3f	100	84.494	ENSPPRG00000024604	POLR3F	100	84.494	Panthera_pardus
ENSCSEG00000001247	polr3f	100	84.494	ENSPTIG00000020292	POLR3F	100	84.494	Panthera_tigris_altaica
ENSCSEG00000001247	polr3f	100	84.810	ENSPTRG00000013287	POLR3F	100	84.810	Pan_troglodytes
ENSCSEG00000001247	polr3f	100	84.494	ENSPANG00000025015	POLR3F	100	84.494	Papio_anubis
ENSCSEG00000001247	polr3f	100	87.342	ENSPKIG00000004427	polr3f	100	87.342	Paramormyrops_kingsleyae
ENSCSEG00000001247	polr3f	87	88.727	ENSPSIG00000016613	POLR3F	100	88.727	Pelodiscus_sinensis
ENSCSEG00000001247	polr3f	100	58.544	ENSPMGG00000018350	polr3f	100	60.759	Periophthalmus_magnuspinnatus
ENSCSEG00000001247	polr3f	100	84.494	ENSPEMG00000006966	Polr3f	100	84.494	Peromyscus_maniculatus_bairdii
ENSCSEG00000001247	polr3f	100	75.000	ENSPMAG00000005530	polr3f	100	75.000	Petromyzon_marinus
ENSCSEG00000001247	polr3f	100	84.494	ENSPCIG00000000908	POLR3F	85	84.494	Phascolarctos_cinereus
ENSCSEG00000001247	polr3f	100	91.456	ENSPFOG00000018334	polr3f	100	91.456	Poecilia_formosa
ENSCSEG00000001247	polr3f	100	91.456	ENSPLAG00000021803	polr3f	100	91.456	Poecilia_latipinna
ENSCSEG00000001247	polr3f	100	91.456	ENSPMEG00000013150	polr3f	100	91.456	Poecilia_mexicana
ENSCSEG00000001247	polr3f	100	91.456	ENSPREG00000005278	polr3f	100	91.456	Poecilia_reticulata
ENSCSEG00000001247	polr3f	100	84.810	ENSPPYG00000010737	POLR3F	100	84.810	Pongo_abelii
ENSCSEG00000001247	polr3f	66	88.514	ENSPCAG00000004893	POLR3F	70	88.514	Procavia_capensis
ENSCSEG00000001247	polr3f	100	84.494	ENSPCOG00000004543	POLR3F	100	84.494	Propithecus_coquereli
ENSCSEG00000001247	polr3f	100	84.177	ENSPVAG00000000403	POLR3F	100	84.177	Pteropus_vampyrus
ENSCSEG00000001247	polr3f	100	93.354	ENSPNYG00000016276	polr3f	100	93.354	Pundamilia_nyererei
ENSCSEG00000001247	polr3f	100	89.241	ENSPNAG00000005164	polr3f	100	89.241	Pygocentrus_nattereri
ENSCSEG00000001247	polr3f	100	83.861	ENSRNOG00000007548	Polr3f	85	83.861	Rattus_norvegicus
ENSCSEG00000001247	polr3f	100	84.494	ENSRBIG00000021268	POLR3F	100	84.494	Rhinopithecus_bieti
ENSCSEG00000001247	polr3f	100	84.494	ENSRROG00000039911	POLR3F	100	84.494	Rhinopithecus_roxellana
ENSCSEG00000001247	polr3f	50	31.928	YNR003C	RPC34	52	31.928	Saccharomyces_cerevisiae
ENSCSEG00000001247	polr3f	100	84.810	ENSSBOG00000018207	POLR3F	100	84.810	Saimiri_boliviensis_boliviensis
ENSCSEG00000001247	polr3f	100	68.224	ENSSHAG00000018160	POLR3F	100	68.224	Sarcophilus_harrisii
ENSCSEG00000001247	polr3f	100	87.975	ENSSFOG00015022433	polr3f	100	87.975	Scleropages_formosus
ENSCSEG00000001247	polr3f	100	91.772	ENSSMAG00000021029	polr3f	100	91.772	Scophthalmus_maximus
ENSCSEG00000001247	polr3f	100	81.013	ENSSDUG00000022435	polr3f	100	81.013	Seriola_dumerili
ENSCSEG00000001247	polr3f	100	91.456	ENSSLDG00000012761	polr3f	100	91.456	Seriola_lalandi_dorsalis
ENSCSEG00000001247	polr3f	100	75.949	ENSSARG00000006039	POLR3F	100	75.949	Sorex_araneus
ENSCSEG00000001247	polr3f	100	84.494	ENSSPUG00000001873	POLR3F	100	84.494	Sphenodon_punctatus
ENSCSEG00000001247	polr3f	100	84.494	ENSSPAG00000002092	polr3f	100	84.494	Stegastes_partitus
ENSCSEG00000001247	polr3f	100	84.177	ENSSSCG00000007095	POLR3F	100	90.086	Sus_scrofa
ENSCSEG00000001247	polr3f	100	85.443	ENSTGUG00000005839	POLR3F	100	85.443	Taeniopygia_guttata
ENSCSEG00000001247	polr3f	100	88.924	ENSTRUG00000012101	polr3f	100	88.924	Takifugu_rubripes
ENSCSEG00000001247	polr3f	100	87.658	ENSTNIG00000006456	polr3f	100	87.658	Tetraodon_nigroviridis
ENSCSEG00000001247	polr3f	100	69.304	ENSTBEG00000007921	POLR3F	100	69.304	Tupaia_belangeri
ENSCSEG00000001247	polr3f	100	84.177	ENSTTRG00000002580	POLR3F	100	84.177	Tursiops_truncatus
ENSCSEG00000001247	polr3f	53	87.349	ENSUAMG00000024166	POLR3F	100	87.349	Ursus_americanus
ENSCSEG00000001247	polr3f	100	84.177	ENSUMAG00000024944	POLR3F	100	84.177	Ursus_maritimus
ENSCSEG00000001247	polr3f	100	84.177	ENSVPAG00000009063	POLR3F	100	84.177	Vicugna_pacos
ENSCSEG00000001247	polr3f	100	84.810	ENSVVUG00000012925	POLR3F	100	84.810	Vulpes_vulpes
ENSCSEG00000001247	polr3f	100	84.810	ENSXETG00000024898	polr3f	100	84.810	Xenopus_tropicalis
ENSCSEG00000001247	polr3f	87	92.727	ENSXCOG00000010301	polr3f	100	92.727	Xiphophorus_couchianus
ENSCSEG00000001247	polr3f	100	91.139	ENSXMAG00000004604	polr3f	100	91.139	Xiphophorus_maculatus