EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001248 (Gene tree)
Gene ID: 103399416
Gene Symbol: trmt1l
Alias: im:7142104|si:dkeyp-11g8.5
Full Name: tRNA methyltransferase 1 like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 10986 bases
Position: chr2:11232420-11243405
Accession: 103399416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001853	TRM	PF02005.16	3e-68	1	2
ENSCSEP00000001853	TRM	PF02005.16	3e-68	2	2
ENSCSEP00000001864	TRM	PF02005.16	7.3e-68	1	2
ENSCSEP00000001864	TRM	PF02005.16	7.3e-68	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001885	-	2962	XM_008338110	ENSCSEP00000001853	679 (aa)	XP_008336332	UPI000494F25B
ENSCSET00000001896	-	1953	-	ENSCSEP00000001864	650 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000001248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001248	trmt1l	95	60.535	ENSG00000121486	TRMT1L	99	70.616	Homo_sapiens
ENSCSEG00000001248	trmt1l	99	81.454	ENSAPOG00000011807	trmt1l	99	81.454	Acanthochromis_polyacanthus
ENSCSEG00000001248	trmt1l	97	59.724	ENSAMEG00000013538	TRMT1L	92	58.616	Ailuropoda_melanoleuca
ENSCSEG00000001248	trmt1l	74	82.636	ENSACIG00000012049	trmt1l	94	82.636	Amphilophus_citrinellus
ENSCSEG00000001248	trmt1l	99	81.157	ENSAOCG00000018112	trmt1l	99	81.157	Amphiprion_ocellaris
ENSCSEG00000001248	trmt1l	99	80.861	ENSAPEG00000021433	trmt1l	98	83.981	Amphiprion_percula
ENSCSEG00000001248	trmt1l	97	85.281	ENSATEG00000004573	trmt1l	99	87.333	Anabas_testudineus
ENSCSEG00000001248	trmt1l	95	62.305	ENSAPLG00000008394	TRMT1L	92	61.398	Anas_platyrhynchos
ENSCSEG00000001248	trmt1l	96	61.395	ENSACAG00000002342	TRMT1L	89	61.395	Anolis_carolinensis
ENSCSEG00000001248	trmt1l	95	60.911	ENSANAG00000038162	TRMT1L	88	60.643	Aotus_nancymaae
ENSCSEG00000001248	trmt1l	99	82.301	ENSACLG00000021625	trmt1l	99	82.301	Astatotilapia_calliptera
ENSCSEG00000001248	trmt1l	99	76.778	ENSAMXG00000009602	trmt1l	98	76.778	Astyanax_mexicanus
ENSCSEG00000001248	trmt1l	97	59.939	ENSBTAG00000011285	TRMT1L	87	60.398	Bos_taurus
ENSCSEG00000001248	trmt1l	95	60.754	ENSCJAG00000005456	TRMT1L	88	60.829	Callithrix_jacchus
ENSCSEG00000001248	trmt1l	95	60.283	ENSCAFG00000013518	TRMT1L	86	60.031	Canis_familiaris
ENSCSEG00000001248	trmt1l	95	60.283	ENSCAFG00020015640	TRMT1L	89	60.031	Canis_lupus_dingo
ENSCSEG00000001248	trmt1l	94	60.726	ENSCHIG00000016522	TRMT1L	87	60.337	Capra_hircus
ENSCSEG00000001248	trmt1l	95	60.597	ENSTSYG00000010465	TRMT1L	91	59.366	Carlito_syrichta
ENSCSEG00000001248	trmt1l	74	58.203	ENSCAPG00000012562	TRMT1L	84	59.375	Cavia_aperea
ENSCSEG00000001248	trmt1l	95	60.535	ENSCPOG00000001567	TRMT1L	92	59.314	Cavia_porcellus
ENSCSEG00000001248	trmt1l	94	60.568	ENSCCAG00000018699	TRMT1L	88	60.308	Cebus_capucinus
ENSCSEG00000001248	trmt1l	93	61.821	ENSCATG00000043114	TRMT1L	87	61.526	Cercocebus_atys
ENSCSEG00000001248	trmt1l	95	61.224	ENSCLAG00000010801	-	87	61.852	Chinchilla_lanigera
ENSCSEG00000001248	trmt1l	97	46.667	ENSCLAG00000010853	-	87	47.149	Chinchilla_lanigera
ENSCSEG00000001248	trmt1l	93	61.821	ENSCSAG00000012880	TRMT1L	87	61.526	Chlorocebus_sabaeus
ENSCSEG00000001248	trmt1l	52	67.213	ENSCHOG00000011164	TRMT1L	56	67.213	Choloepus_hoffmanni
ENSCSEG00000001248	trmt1l	92	65.920	ENSCPBG00000015694	TRMT1L	87	65.764	Chrysemys_picta_bellii
ENSCSEG00000001248	trmt1l	93	62.460	ENSCANG00000031107	TRMT1L	87	62.150	Colobus_angolensis_palliatus
ENSCSEG00000001248	trmt1l	95	60.720	ENSCGRG00001019297	Trmt1l	89	59.848	Cricetulus_griseus_chok1gshd
ENSCSEG00000001248	trmt1l	95	60.720	ENSCGRG00000005036	Trmt1l	89	59.848	Cricetulus_griseus_crigri
ENSCSEG00000001248	trmt1l	98	79.760	ENSCVAG00000012274	trmt1l	99	79.674	Cyprinodon_variegatus
ENSCSEG00000001248	trmt1l	99	75.797	ENSDARG00000042057	trmt1l	99	75.797	Danio_rerio
ENSCSEG00000001248	trmt1l	96	59.908	ENSDNOG00000005239	TRMT1L	89	59.879	Dasypus_novemcinctus
ENSCSEG00000001248	trmt1l	86	59.549	ENSDORG00000003298	Trmt1l	86	59.691	Dipodomys_ordii
ENSCSEG00000001248	trmt1l	72	68.085	ENSETEG00000015895	TRMT1L	67	71.111	Echinops_telfairi
ENSCSEG00000001248	trmt1l	94	46.732	ENSEBUG00000010301	trmt1l	95	46.732	Eptatretus_burgeri
ENSCSEG00000001248	trmt1l	95	59.076	ENSEASG00005005551	TRMT1L	88	58.385	Equus_asinus_asinus
ENSCSEG00000001248	trmt1l	95	60.625	ENSECAG00000020999	TRMT1L	83	59.909	Equus_caballus
ENSCSEG00000001248	trmt1l	85	62.609	ENSEEUG00000014110	TRMT1L	83	62.609	Erinaceus_europaeus
ENSCSEG00000001248	trmt1l	99	77.331	ENSELUG00000020587	trmt1l	99	77.762	Esox_lucius
ENSCSEG00000001248	trmt1l	94	60.597	ENSFCAG00000011285	TRMT1L	92	58.321	Felis_catus
ENSCSEG00000001248	trmt1l	92	63.826	ENSFALG00000003177	TRMT1L	95	64.013	Ficedula_albicollis
ENSCSEG00000001248	trmt1l	97	60.769	ENSFDAG00000008822	TRMT1L	91	60.152	Fukomys_damarensis
ENSCSEG00000001248	trmt1l	78	86.200	ENSFHEG00000014328	trmt1l	99	86.200	Fundulus_heteroclitus
ENSCSEG00000001248	trmt1l	93	78.431	ENSGMOG00000009535	trmt1l	98	80.000	Gadus_morhua
ENSCSEG00000001248	trmt1l	92	62.821	ENSGALG00000033077	TRMT1L	89	59.855	Gallus_gallus
ENSCSEG00000001248	trmt1l	98	81.437	ENSGAFG00000012445	trmt1l	98	81.437	Gambusia_affinis
ENSCSEG00000001248	trmt1l	94	79.005	ENSGACG00000005050	trmt1l	100	82.074	Gasterosteus_aculeatus
ENSCSEG00000001248	trmt1l	92	66.400	ENSGAGG00000007441	TRMT1L	86	63.018	Gopherus_agassizii
ENSCSEG00000001248	trmt1l	95	61.006	ENSGGOG00000011778	TRMT1L	89	60.736	Gorilla_gorilla
ENSCSEG00000001248	trmt1l	99	82.153	ENSHBUG00000000622	trmt1l	99	82.153	Haplochromis_burtoni
ENSCSEG00000001248	trmt1l	97	49.309	ENSHGLG00000012595	-	95	49.091	Heterocephalus_glaber_female
ENSCSEG00000001248	trmt1l	93	57.571	ENSHGLG00000003135	-	87	57.571	Heterocephalus_glaber_female
ENSCSEG00000001248	trmt1l	97	49.309	ENSHGLG00100004569	-	95	49.091	Heterocephalus_glaber_male
ENSCSEG00000001248	trmt1l	95	60.849	ENSHGLG00100019412	-	87	61.321	Heterocephalus_glaber_male
ENSCSEG00000001248	trmt1l	98	72.347	ENSIPUG00000008873	trmt1l	99	72.347	Ictalurus_punctatus
ENSCSEG00000001248	trmt1l	97	59.969	ENSSTOG00000010332	TRMT1L	90	59.969	Ictidomys_tridecemlineatus
ENSCSEG00000001248	trmt1l	95	60.220	ENSJJAG00000010929	Trmt1l	90	60.220	Jaculus_jaculus
ENSCSEG00000001248	trmt1l	93	81.579	ENSKMAG00000010310	trmt1l	91	82.566	Kryptolebias_marmoratus
ENSCSEG00000001248	trmt1l	99	83.655	ENSLBEG00000003487	trmt1l	99	83.655	Labrus_bergylta
ENSCSEG00000001248	trmt1l	91	83.657	ENSLBEG00000007982	-	100	83.657	Labrus_bergylta
ENSCSEG00000001248	trmt1l	93	65.927	ENSLACG00000008447	TRMT1L	97	64.211	Latimeria_chalumnae
ENSCSEG00000001248	trmt1l	98	73.684	ENSLOCG00000001781	trmt1l	98	73.684	Lepisosteus_oculatus
ENSCSEG00000001248	trmt1l	98	60.091	ENSLAFG00000004339	TRMT1L	89	60.643	Loxodonta_africana
ENSCSEG00000001248	trmt1l	93	61.821	ENSMFAG00000037592	TRMT1L	87	61.526	Macaca_fascicularis
ENSCSEG00000001248	trmt1l	95	61.526	ENSMMUG00000013879	TRMT1L	92	61.526	Macaca_mulatta
ENSCSEG00000001248	trmt1l	93	61.821	ENSMNEG00000041637	TRMT1L	87	61.526	Macaca_nemestrina
ENSCSEG00000001248	trmt1l	93	61.821	ENSMLEG00000004840	TRMT1L	87	61.526	Mandrillus_leucophaeus
ENSCSEG00000001248	trmt1l	97	79.123	ENSMAMG00000015305	trmt1l	99	82.651	Mastacembelus_armatus
ENSCSEG00000001248	trmt1l	99	82.448	ENSMZEG00005017822	trmt1l	99	82.448	Maylandia_zebra
ENSCSEG00000001248	trmt1l	92	63.259	ENSMGAG00000000930	TRMT1L	95	63.665	Meleagris_gallopavo
ENSCSEG00000001248	trmt1l	95	58.100	ENSMAUG00000019870	Trmt1l	91	57.315	Mesocricetus_auratus
ENSCSEG00000001248	trmt1l	95	60.535	ENSMICG00000009494	TRMT1L	89	60.276	Microcebus_murinus
ENSCSEG00000001248	trmt1l	95	59.874	ENSMOCG00000016453	Trmt1l	90	59.021	Microtus_ochrogaster
ENSCSEG00000001248	trmt1l	97	78.366	ENSMMOG00000016961	trmt1l	100	78.366	Mola_mola
ENSCSEG00000001248	trmt1l	94	64.984	ENSMODG00000007454	TRMT1L	73	64.984	Monodelphis_domestica
ENSCSEG00000001248	trmt1l	100	81.938	ENSMALG00000019306	trmt1l	100	81.938	Monopterus_albus
ENSCSEG00000001248	trmt1l	93	61.576	MGP_CAROLIEiJ_G0014693	Trmt1l	88	60.653	Mus_caroli
ENSCSEG00000001248	trmt1l	93	61.218	ENSMUSG00000053286	Trmt1l	88	60.310	Mus_musculus
ENSCSEG00000001248	trmt1l	93	61.218	MGP_PahariEiJ_G0027929	Trmt1l	87	60.686	Mus_pahari
ENSCSEG00000001248	trmt1l	79	69.149	MGP_SPRETEiJ_G0015500	Trmt1l	86	69.149	Mus_spretus
ENSCSEG00000001248	trmt1l	95	56.583	ENSMPUG00000011859	TRMT1L	89	57.034	Mustela_putorius_furo
ENSCSEG00000001248	trmt1l	94	60.870	ENSMLUG00000001136	TRMT1L	91	60.638	Myotis_lucifugus
ENSCSEG00000001248	trmt1l	95	60.597	ENSNGAG00000011685	Trmt1l	90	59.574	Nannospalax_galili
ENSCSEG00000001248	trmt1l	74	84.568	ENSNBRG00000004053	trmt1l	100	84.568	Neolamprologus_brichardi
ENSCSEG00000001248	trmt1l	95	61.164	ENSNLEG00000018030	TRMT1L	89	60.890	Nomascus_leucogenys
ENSCSEG00000001248	trmt1l	80	73.864	ENSMEUG00000011344	TRMT1L	77	73.864	Notamacropus_eugenii
ENSCSEG00000001248	trmt1l	81	61.738	ENSOPRG00000000680	TRMT1L	83	61.738	Ochotona_princeps
ENSCSEG00000001248	trmt1l	98	57.186	ENSODEG00000000826	TRMT1L	91	57.186	Octodon_degus
ENSCSEG00000001248	trmt1l	99	82.891	ENSONIG00000007823	trmt1l	100	83.494	Oreochromis_niloticus
ENSCSEG00000001248	trmt1l	94	63.981	ENSOANG00000001010	TRMT1L	96	63.981	Ornithorhynchus_anatinus
ENSCSEG00000001248	trmt1l	94	61.417	ENSOCUG00000004896	TRMT1L	89	60.583	Oryctolagus_cuniculus
ENSCSEG00000001248	trmt1l	97	82.067	ENSORLG00000029610	trmt1l	99	84.653	Oryzias_latipes
ENSCSEG00000001248	trmt1l	97	82.067	ENSORLG00020002203	trmt1l	99	80.945	Oryzias_latipes_hni
ENSCSEG00000001248	trmt1l	97	81.763	ENSORLG00015021512	trmt1l	99	80.945	Oryzias_latipes_hsok
ENSCSEG00000001248	trmt1l	84	86.957	ENSOMEG00000016275	trmt1l	87	86.957	Oryzias_melastigma
ENSCSEG00000001248	trmt1l	94	54.272	ENSOGAG00000016186	TRMT1L	97	55.840	Otolemur_garnettii
ENSCSEG00000001248	trmt1l	94	60.726	ENSOARG00000003786	TRMT1L	87	60.337	Ovis_aries
ENSCSEG00000001248	trmt1l	95	60.535	ENSPPAG00000029141	TRMT1L	89	60.276	Pan_paniscus
ENSCSEG00000001248	trmt1l	94	60.597	ENSPPRG00000023981	TRMT1L	89	59.877	Panthera_pardus
ENSCSEG00000001248	trmt1l	94	60.597	ENSPTIG00000021754	TRMT1L	92	58.321	Panthera_tigris_altaica
ENSCSEG00000001248	trmt1l	95	60.535	ENSPTRG00000001776	TRMT1L	89	60.276	Pan_troglodytes
ENSCSEG00000001248	trmt1l	93	59.904	ENSPANG00000020890	TRMT1L	87	59.657	Papio_anubis
ENSCSEG00000001248	trmt1l	98	76.350	ENSPKIG00000005941	trmt1l	97	76.350	Paramormyrops_kingsleyae
ENSCSEG00000001248	trmt1l	92	65.794	ENSPSIG00000010011	TRMT1L	91	65.705	Pelodiscus_sinensis
ENSCSEG00000001248	trmt1l	82	72.810	ENSPMGG00000021359	trmt1l	95	73.175	Periophthalmus_magnuspinnatus
ENSCSEG00000001248	trmt1l	95	61.224	ENSPEMG00000000031	Trmt1l	91	60.334	Peromyscus_maniculatus_bairdii
ENSCSEG00000001248	trmt1l	92	57.962	ENSPMAG00000005838	trmt1l	99	58.188	Petromyzon_marinus
ENSCSEG00000001248	trmt1l	94	64.696	ENSPCIG00000002409	TRMT1L	84	64.696	Phascolarctos_cinereus
ENSCSEG00000001248	trmt1l	99	81.029	ENSPFOG00000003872	trmt1l	100	81.029	Poecilia_formosa
ENSCSEG00000001248	trmt1l	99	81.029	ENSPLAG00000010387	trmt1l	100	81.029	Poecilia_latipinna
ENSCSEG00000001248	trmt1l	99	80.882	ENSPMEG00000011828	trmt1l	99	84.046	Poecilia_mexicana
ENSCSEG00000001248	trmt1l	99	80.564	ENSPREG00000002866	trmt1l	99	80.741	Poecilia_reticulata
ENSCSEG00000001248	trmt1l	95	61.006	ENSPPYG00000000416	TRMT1L	89	60.736	Pongo_abelii
ENSCSEG00000001248	trmt1l	84	64.078	ENSPCAG00000008257	TRMT1L	77	63.462	Procavia_capensis
ENSCSEG00000001248	trmt1l	80	57.803	ENSPCOG00000005682	TRMT1L	87	44.785	Propithecus_coquereli
ENSCSEG00000001248	trmt1l	95	54.389	ENSPVAG00000005961	TRMT1L	92	52.941	Pteropus_vampyrus
ENSCSEG00000001248	trmt1l	99	77.745	ENSPNYG00000005607	trmt1l	99	81.169	Pundamilia_nyererei
ENSCSEG00000001248	trmt1l	99	76.599	ENSPNAG00000004389	trmt1l	98	76.599	Pygocentrus_nattereri
ENSCSEG00000001248	trmt1l	94	60.697	ENSRNOG00000002580	Trmt1l	89	59.816	Rattus_norvegicus
ENSCSEG00000001248	trmt1l	93	62.300	ENSRBIG00000042589	TRMT1L	87	61.994	Rhinopithecus_bieti
ENSCSEG00000001248	trmt1l	93	62.300	ENSRROG00000032183	TRMT1L	87	61.994	Rhinopithecus_roxellana
ENSCSEG00000001248	trmt1l	94	61.672	ENSSBOG00000029282	TRMT1L	88	61.385	Saimiri_boliviensis_boliviensis
ENSCSEG00000001248	trmt1l	99	75.613	ENSSFOG00015004878	trmt1l	99	75.358	Scleropages_formosus
ENSCSEG00000001248	trmt1l	74	83.178	ENSSMAG00000015425	trmt1l	100	79.646	Scophthalmus_maximus
ENSCSEG00000001248	trmt1l	99	85.503	ENSSDUG00000021807	trmt1l	99	87.769	Seriola_dumerili
ENSCSEG00000001248	trmt1l	89	88.099	ENSSLDG00000016579	trmt1l	99	88.099	Seriola_lalandi_dorsalis
ENSCSEG00000001248	trmt1l	70	62.207	ENSSARG00000010135	TRMT1L	83	63.084	Sorex_araneus
ENSCSEG00000001248	trmt1l	89	66.327	ENSSPUG00000003927	TRMT1L	96	66.107	Sphenodon_punctatus
ENSCSEG00000001248	trmt1l	97	83.233	ENSSPAG00000008597	trmt1l	99	82.667	Stegastes_partitus
ENSCSEG00000001248	trmt1l	94	61.538	ENSSSCG00000021393	TRMT1L	81	61.538	Sus_scrofa
ENSCSEG00000001248	trmt1l	92	63.344	ENSTGUG00000003737	TRMT1L	92	63.434	Taeniopygia_guttata
ENSCSEG00000001248	trmt1l	93	75.402	ENSTRUG00000002396	trmt1l	99	69.193	Takifugu_rubripes
ENSCSEG00000001248	trmt1l	61	78.998	ENSTNIG00000005534	trmt1l	99	78.998	Tetraodon_nigroviridis
ENSCSEG00000001248	trmt1l	83	57.853	ENSTBEG00000016498	TRMT1L	78	57.908	Tupaia_belangeri
ENSCSEG00000001248	trmt1l	94	58.833	ENSTTRG00000005892	TRMT1L	86	59.306	Tursiops_truncatus
ENSCSEG00000001248	trmt1l	95	60.440	ENSUAMG00000020936	TRMT1L	92	58.616	Ursus_americanus
ENSCSEG00000001248	trmt1l	95	60.440	ENSUMAG00000021919	TRMT1L	90	58.616	Ursus_maritimus
ENSCSEG00000001248	trmt1l	94	61.331	ENSVPAG00000011854	TRMT1L	96	61.331	Vicugna_pacos
ENSCSEG00000001248	trmt1l	95	60.283	ENSVVUG00000009166	TRMT1L	88	60.031	Vulpes_vulpes
ENSCSEG00000001248	trmt1l	78	58.153	ENSXETG00000004539	trmt1l	98	57.060	Xenopus_tropicalis
ENSCSEG00000001248	trmt1l	92	78.798	ENSXCOG00000007372	trmt1l	94	78.798	Xiphophorus_couchianus
ENSCSEG00000001248	trmt1l	98	81.832	ENSXMAG00000003575	trmt1l	98	81.832	Xiphophorus_maculatus