EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001269 (Gene tree)
Gene ID: -
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 2331 bases
Position: chr2:11244613-11246943
Accession: 103399444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001876	PRP38	PF03371.15	5.9e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001908	-	864	XM_008338138	ENSCSEP00000001876	288 (aa)	XP_008336360	-

Gene Model

Click here to download ENSCSEG00000001269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001269's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001269	prpf38a	79	87.013	ENSG00000134748	PRPF38A	71	87.783	Homo_sapiens
ENSCSEG00000001269	prpf38a	76	94.144	ENSAPOG00000011652	prpf38a	72	94.144	Acanthochromis_polyacanthus
ENSCSEG00000001269	prpf38a	79	87.013	ENSAMEG00000009319	PRPF38A	71	87.783	Ailuropoda_melanoleuca
ENSCSEG00000001269	prpf38a	100	95.139	ENSACIG00000012292	prpf38a	96	95.139	Amphilophus_citrinellus
ENSCSEG00000001269	prpf38a	76	94.144	ENSAOCG00000018004	prpf38a	72	94.144	Amphiprion_ocellaris
ENSCSEG00000001269	prpf38a	76	94.144	ENSAPEG00000021414	prpf38a	72	94.144	Amphiprion_percula
ENSCSEG00000001269	prpf38a	76	90.991	ENSATEG00000004608	prpf38a	72	90.991	Anabas_testudineus
ENSCSEG00000001269	prpf38a	57	84.940	ENSAPLG00000005827	PRPF38A	63	85.897	Anas_platyrhynchos
ENSCSEG00000001269	prpf38a	79	86.147	ENSACAG00000008249	PRPF38A	71	86.878	Anolis_carolinensis
ENSCSEG00000001269	prpf38a	79	87.013	ENSANAG00000027839	PRPF38A	71	87.783	Aotus_nancymaae
ENSCSEG00000001269	prpf38a	79	56.838	ENSANAG00000029204	-	70	56.696	Aotus_nancymaae
ENSCSEG00000001269	prpf38a	76	93.694	ENSACLG00000021595	prpf38a	74	93.694	Astatotilapia_calliptera
ENSCSEG00000001269	prpf38a	77	91.150	ENSAMXG00000029274	prpf38a	72	91.150	Astyanax_mexicanus
ENSCSEG00000001269	prpf38a	87	83.398	ENSBTAG00000002720	PRPF38A	75	87.783	Bos_taurus
ENSCSEG00000001269	prpf38a	67	62.564	WBGene00008380	prp-38	67	60.648	Caenorhabditis_elegans
ENSCSEG00000001269	prpf38a	87	83.398	ENSCJAG00000021594	PRPF38A	74	87.783	Callithrix_jacchus
ENSCSEG00000001269	prpf38a	79	87.013	ENSCAFG00000003740	PRPF38A	71	87.783	Canis_familiaris
ENSCSEG00000001269	prpf38a	79	87.013	ENSCAFG00020010939	PRPF38A	71	87.783	Canis_lupus_dingo
ENSCSEG00000001269	prpf38a	79	87.013	ENSCHIG00000024730	PRPF38A	71	87.783	Capra_hircus
ENSCSEG00000001269	prpf38a	65	83.511	ENSTSYG00000031994	-	63	84.270	Carlito_syrichta
ENSCSEG00000001269	prpf38a	79	87.013	ENSTSYG00000009868	-	71	87.783	Carlito_syrichta
ENSCSEG00000001269	prpf38a	87	84.375	ENSCPOG00000005079	PRPF38A	71	87.783	Cavia_porcellus
ENSCSEG00000001269	prpf38a	79	87.013	ENSCCAG00000026502	PRPF38A	71	87.783	Cebus_capucinus
ENSCSEG00000001269	prpf38a	79	87.013	ENSCATG00000032296	PRPF38A	71	87.783	Cercocebus_atys
ENSCSEG00000001269	prpf38a	98	52.613	ENSCATG00000044190	-	57	55.080	Cercocebus_atys
ENSCSEG00000001269	prpf38a	79	87.013	ENSCLAG00000005816	PRPF38A	71	87.783	Chinchilla_lanigera
ENSCSEG00000001269	prpf38a	79	86.580	ENSCPBG00000014791	PRPF38A	71	87.330	Chrysemys_picta_bellii
ENSCSEG00000001269	prpf38a	79	68.831	ENSCSAVG00000009580	-	62	75.532	Ciona_savignyi
ENSCSEG00000001269	prpf38a	79	87.013	ENSCANG00000032608	PRPF38A	74	87.783	Colobus_angolensis_palliatus
ENSCSEG00000001269	prpf38a	79	87.013	ENSCGRG00001018502	-	71	87.783	Cricetulus_griseus_chok1gshd
ENSCSEG00000001269	prpf38a	89	71.705	ENSCGRG00001002557	-	74	74.545	Cricetulus_griseus_chok1gshd
ENSCSEG00000001269	prpf38a	79	87.013	ENSCGRG00000014868	Prpf38a	71	87.783	Cricetulus_griseus_crigri
ENSCSEG00000001269	prpf38a	76	93.665	ENSCVAG00000012305	prpf38a	72	93.665	Cyprinodon_variegatus
ENSCSEG00000001269	prpf38a	76	90.498	ENSDARG00000039213	prpf38a	71	90.498	Danio_rerio
ENSCSEG00000001269	prpf38a	79	87.013	ENSDNOG00000042326	PRPF38A	72	87.783	Dasypus_novemcinctus
ENSCSEG00000001269	prpf38a	89	74.713	ENSDORG00000023691	-	75	80.734	Dipodomys_ordii
ENSCSEG00000001269	prpf38a	79	71.179	ENSDORG00000023857	-	66	71.233	Dipodomys_ordii
ENSCSEG00000001269	prpf38a	89	74.713	ENSDORG00000025371	-	75	80.734	Dipodomys_ordii
ENSCSEG00000001269	prpf38a	70	69.268	FBgn0050342	Prp38	90	52.027	Drosophila_melanogaster
ENSCSEG00000001269	prpf38a	81	79.079	ENSEBUG00000012588	prpf38a	71	78.475	Eptatretus_burgeri
ENSCSEG00000001269	prpf38a	79	87.013	ENSEASG00005014427	PRPF38A	71	87.783	Equus_asinus_asinus
ENSCSEG00000001269	prpf38a	79	87.013	ENSECAG00000022628	PRPF38A	71	87.783	Equus_caballus
ENSCSEG00000001269	prpf38a	76	90.045	ENSELUG00000021094	prpf38a	75	90.045	Esox_lucius
ENSCSEG00000001269	prpf38a	79	87.013	ENSFCAG00000002518	PRPF38A	71	87.783	Felis_catus
ENSCSEG00000001269	prpf38a	65	85.638	ENSFALG00000005598	-	66	86.517	Ficedula_albicollis
ENSCSEG00000001269	prpf38a	100	76.109	ENSFALG00000003612	-	73	83.486	Ficedula_albicollis
ENSCSEG00000001269	prpf38a	87	84.706	ENSFDAG00000011287	PRPF38A	72	87.783	Fukomys_damarensis
ENSCSEG00000001269	prpf38a	74	94.470	ENSFHEG00000014317	prpf38a	99	94.218	Fundulus_heteroclitus
ENSCSEG00000001269	prpf38a	57	93.373	ENSGMOG00000011384	prpf38a	54	93.373	Gadus_morhua
ENSCSEG00000001269	prpf38a	79	87.879	ENSGALG00000010627	PRPF38A	71	88.688	Gallus_gallus
ENSCSEG00000001269	prpf38a	76	93.665	ENSGAFG00000012422	prpf38a	72	93.665	Gambusia_affinis
ENSCSEG00000001269	prpf38a	76	91.031	ENSGACG00000005423	prpf38a	72	91.031	Gasterosteus_aculeatus
ENSCSEG00000001269	prpf38a	79	86.580	ENSGAGG00000020547	PRPF38A	71	87.330	Gopherus_agassizii
ENSCSEG00000001269	prpf38a	79	87.013	ENSGGOG00000003940	PRPF38A	71	87.783	Gorilla_gorilla
ENSCSEG00000001269	prpf38a	69	95.567	ENSHBUG00000020572	prpf38a	86	95.567	Haplochromis_burtoni
ENSCSEG00000001269	prpf38a	89	74.806	ENSHGLG00000007918	-	71	76.364	Heterocephalus_glaber_female
ENSCSEG00000001269	prpf38a	79	87.013	ENSHGLG00000000475	PRPF38A	71	87.783	Heterocephalus_glaber_female
ENSCSEG00000001269	prpf38a	79	87.013	ENSHGLG00100008935	PRPF38A	71	87.783	Heterocephalus_glaber_male
ENSCSEG00000001269	prpf38a	89	74.806	ENSHGLG00100003928	-	71	76.364	Heterocephalus_glaber_male
ENSCSEG00000001269	prpf38a	70	86.538	ENSHCOG00000020781	prpf38a	59	92.021	Hippocampus_comes
ENSCSEG00000001269	prpf38a	79	88.793	ENSIPUG00000005757	prpf38a	71	88.739	Ictalurus_punctatus
ENSCSEG00000001269	prpf38a	79	87.013	ENSSTOG00000015610	PRPF38A	71	87.783	Ictidomys_tridecemlineatus
ENSCSEG00000001269	prpf38a	79	86.580	ENSJJAG00000015811	Prpf38a	71	87.330	Jaculus_jaculus
ENSCSEG00000001269	prpf38a	76	93.213	ENSKMAG00000006588	prpf38a	72	93.213	Kryptolebias_marmoratus
ENSCSEG00000001269	prpf38a	100	85.374	ENSLBEG00000020585	prpf38a	72	91.403	Labrus_bergylta
ENSCSEG00000001269	prpf38a	77	86.222	ENSLACG00000011495	PRPF38A	71	86.425	Latimeria_chalumnae
ENSCSEG00000001269	prpf38a	76	88.288	ENSLOCG00000006262	prpf38a	72	88.739	Lepisosteus_oculatus
ENSCSEG00000001269	prpf38a	79	87.013	ENSLAFG00000025862	PRPF38A	71	87.783	Loxodonta_africana
ENSCSEG00000001269	prpf38a	87	83.398	ENSMFAG00000039449	PRPF38A	74	87.783	Macaca_fascicularis
ENSCSEG00000001269	prpf38a	65	84.574	ENSMMUG00000014333	PRPF38A	64	85.393	Macaca_mulatta
ENSCSEG00000001269	prpf38a	98	51.916	ENSMNEG00000040242	-	65	56.796	Macaca_nemestrina
ENSCSEG00000001269	prpf38a	79	87.013	ENSMNEG00000031221	PRPF38A	71	87.783	Macaca_nemestrina
ENSCSEG00000001269	prpf38a	79	87.013	ENSMLEG00000041105	PRPF38A	71	87.783	Mandrillus_leucophaeus
ENSCSEG00000001269	prpf38a	76	94.144	ENSMAMG00000015431	prpf38a	95	94.218	Mastacembelus_armatus
ENSCSEG00000001269	prpf38a	76	93.694	ENSMZEG00005017838	prpf38a	72	93.694	Maylandia_zebra
ENSCSEG00000001269	prpf38a	79	87.879	ENSMGAG00000011176	PRPF38A	74	88.688	Meleagris_gallopavo
ENSCSEG00000001269	prpf38a	89	78.030	ENSMAUG00000018029	-	84	83.710	Mesocricetus_auratus
ENSCSEG00000001269	prpf38a	79	87.013	ENSMICG00000014193	PRPF38A	71	87.783	Microcebus_murinus
ENSCSEG00000001269	prpf38a	79	87.013	ENSMOCG00000013080	Prpf38a	71	87.783	Microtus_ochrogaster
ENSCSEG00000001269	prpf38a	87	90.551	ENSMMOG00000016972	prpf38a	78	93.213	Mola_mola
ENSCSEG00000001269	prpf38a	79	84.052	ENSMODG00000000644	PRPF38A	71	84.685	Monodelphis_domestica
ENSCSEG00000001269	prpf38a	76	94.118	ENSMALG00000019363	prpf38a	92	94.558	Monopterus_albus
ENSCSEG00000001269	prpf38a	79	86.580	MGP_CAROLIEiJ_G0026269	Prpf38a	71	87.330	Mus_caroli
ENSCSEG00000001269	prpf38a	79	86.580	ENSMUSG00000063800	Prpf38a	71	87.330	Mus_musculus
ENSCSEG00000001269	prpf38a	79	86.580	MGP_PahariEiJ_G0028602	Prpf38a	71	87.330	Mus_pahari
ENSCSEG00000001269	prpf38a	79	86.580	MGP_SPRETEiJ_G0027238	Prpf38a	93	90.426	Mus_spretus
ENSCSEG00000001269	prpf38a	79	87.013	ENSMPUG00000006896	PRPF38A	71	87.783	Mustela_putorius_furo
ENSCSEG00000001269	prpf38a	87	83.465	ENSNGAG00000011884	Prpf38a	72	87.783	Nannospalax_galili
ENSCSEG00000001269	prpf38a	97	95.324	ENSNBRG00000004013	prpf38a	94	95.486	Neolamprologus_brichardi
ENSCSEG00000001269	prpf38a	100	58.586	ENSNLEG00000012592	-	67	57.727	Nomascus_leucogenys
ENSCSEG00000001269	prpf38a	71	86.058	ENSNLEG00000017999	PRPF38A	63	86.869	Nomascus_leucogenys
ENSCSEG00000001269	prpf38a	98	51.903	ENSNLEG00000033398	-	60	51.152	Nomascus_leucogenys
ENSCSEG00000001269	prpf38a	79	82.684	ENSMEUG00000003860	PRPF38A	71	83.258	Notamacropus_eugenii
ENSCSEG00000001269	prpf38a	78	87.281	ENSOPRG00000008985	PRPF38A	92	87.783	Ochotona_princeps
ENSCSEG00000001269	prpf38a	79	87.013	ENSODEG00000005869	PRPF38A	71	87.783	Octodon_degus
ENSCSEG00000001269	prpf38a	76	92.793	ENSONIG00000007816	prpf38a	72	92.793	Oreochromis_niloticus
ENSCSEG00000001269	prpf38a	79	46.983	ENSOANG00000009541	-	71	45.740	Ornithorhynchus_anatinus
ENSCSEG00000001269	prpf38a	79	87.013	ENSOCUG00000000963	PRPF38A	71	87.783	Oryctolagus_cuniculus
ENSCSEG00000001269	prpf38a	100	87.075	ENSORLG00000013485	prpf38a	79	93.213	Oryzias_latipes
ENSCSEG00000001269	prpf38a	100	87.075	ENSORLG00020002130	prpf38a	79	93.213	Oryzias_latipes_hni
ENSCSEG00000001269	prpf38a	100	86.735	ENSORLG00015021393	prpf38a	75	92.760	Oryzias_latipes_hsok
ENSCSEG00000001269	prpf38a	100	87.075	ENSOMEG00000016333	prpf38a	72	93.213	Oryzias_melastigma
ENSCSEG00000001269	prpf38a	79	87.013	ENSOGAG00000005423	PRPF38A	71	87.783	Otolemur_garnettii
ENSCSEG00000001269	prpf38a	79	87.013	ENSOARG00000005373	PRPF38A	71	87.783	Ovis_aries
ENSCSEG00000001269	prpf38a	98	66.552	ENSPPAG00000033867	-	68	68.636	Pan_paniscus
ENSCSEG00000001269	prpf38a	79	87.013	ENSPPAG00000030905	PRPF38A	71	87.783	Pan_paniscus
ENSCSEG00000001269	prpf38a	79	87.013	ENSPPRG00000013268	PRPF38A	71	87.783	Panthera_pardus
ENSCSEG00000001269	prpf38a	79	87.013	ENSPTIG00000015419	PRPF38A	71	87.783	Panthera_tigris_altaica
ENSCSEG00000001269	prpf38a	87	83.398	ENSPTRG00000000739	PRPF38A	74	87.783	Pan_troglodytes
ENSCSEG00000001269	prpf38a	79	87.013	ENSPANG00000015483	PRPF38A	71	87.783	Papio_anubis
ENSCSEG00000001269	prpf38a	76	91.403	ENSPKIG00000011439	prpf38a	72	91.403	Paramormyrops_kingsleyae
ENSCSEG00000001269	prpf38a	79	86.147	ENSPSIG00000017487	PRPF38A	71	86.878	Pelodiscus_sinensis
ENSCSEG00000001269	prpf38a	97	83.154	ENSPMGG00000021352	prpf38a	76	91.324	Periophthalmus_magnuspinnatus
ENSCSEG00000001269	prpf38a	79	87.013	ENSPEMG00000023277	-	71	87.783	Peromyscus_maniculatus_bairdii
ENSCSEG00000001269	prpf38a	76	81.250	ENSPEMG00000011212	-	70	81.532	Peromyscus_maniculatus_bairdii
ENSCSEG00000001269	prpf38a	79	83.621	ENSPCIG00000022369	-	71	84.234	Phascolarctos_cinereus
ENSCSEG00000001269	prpf38a	87	84.556	ENSPFOG00000004248	prpf38a	72	93.665	Poecilia_formosa
ENSCSEG00000001269	prpf38a	76	93.665	ENSPLAG00000010328	prpf38a	72	93.665	Poecilia_latipinna
ENSCSEG00000001269	prpf38a	76	93.665	ENSPMEG00000011804	prpf38a	72	93.665	Poecilia_mexicana
ENSCSEG00000001269	prpf38a	88	79.623	ENSPREG00000002835	prpf38a	58	94.149	Poecilia_reticulata
ENSCSEG00000001269	prpf38a	79	76.271	ENSPPYG00000001348	PRPF38A	71	76.549	Pongo_abelii
ENSCSEG00000001269	prpf38a	79	87.446	ENSPCAG00000013328	PRPF38A	71	88.235	Procavia_capensis
ENSCSEG00000001269	prpf38a	94	69.565	ENSPCOG00000020709	-	73	71.041	Propithecus_coquereli
ENSCSEG00000001269	prpf38a	79	87.013	ENSPCOG00000016387	-	71	87.783	Propithecus_coquereli
ENSCSEG00000001269	prpf38a	79	87.013	ENSPVAG00000009803	PRPF38A	71	87.783	Pteropus_vampyrus
ENSCSEG00000001269	prpf38a	76	93.694	ENSPNYG00000005571	prpf38a	72	93.694	Pundamilia_nyererei
ENSCSEG00000001269	prpf38a	77	92.035	ENSPNAG00000010399	prpf38a	72	92.035	Pygocentrus_nattereri
ENSCSEG00000001269	prpf38a	79	87.446	ENSRNOG00000009451	Prpf38a	71	88.235	Rattus_norvegicus
ENSCSEG00000001269	prpf38a	79	87.013	ENSRBIG00000036442	PRPF38A	74	87.783	Rhinopithecus_bieti
ENSCSEG00000001269	prpf38a	79	87.013	ENSRROG00000032788	PRPF38A	71	87.783	Rhinopithecus_roxellana
ENSCSEG00000001269	prpf38a	89	69.615	ENSRROG00000040003	-	72	71.493	Rhinopithecus_roxellana
ENSCSEG00000001269	prpf38a	100	54.054	ENSRROG00000034606	-	65	72.951	Rhinopithecus_roxellana
ENSCSEG00000001269	prpf38a	79	87.013	ENSSBOG00000019515	PRPF38A	71	87.783	Saimiri_boliviensis_boliviensis
ENSCSEG00000001269	prpf38a	84	71.951	ENSSHAG00000006029	-	74	76.018	Sarcophilus_harrisii
ENSCSEG00000001269	prpf38a	65	80.952	ENSSHAG00000006906	-	66	81.564	Sarcophilus_harrisii
ENSCSEG00000001269	prpf38a	76	89.640	ENSSFOG00015013572	prpf38a	72	86.937	Scleropages_formosus
ENSCSEG00000001269	prpf38a	76	92.760	ENSSMAG00000015379	prpf38a	72	92.760	Scophthalmus_maximus
ENSCSEG00000001269	prpf38a	76	93.665	ENSSDUG00000001324	prpf38a	72	93.665	Seriola_dumerili
ENSCSEG00000001269	prpf38a	76	93.665	ENSSLDG00000014803	prpf38a	72	93.665	Seriola_lalandi_dorsalis
ENSCSEG00000001269	prpf38a	61	97.674	ENSSARG00000014458	PRPF38A	71	65.611	Sorex_araneus
ENSCSEG00000001269	prpf38a	79	86.580	ENSSPUG00000013259	PRPF38A	71	87.330	Sphenodon_punctatus
ENSCSEG00000001269	prpf38a	97	81.655	ENSSPAG00000010449	prpf38a	95	82.292	Stegastes_partitus
ENSCSEG00000001269	prpf38a	79	87.013	ENSSSCG00000028288	PRPF38A	71	87.783	Sus_scrofa
ENSCSEG00000001269	prpf38a	79	83.117	ENSTGUG00000008995	PRPF38A	71	83.710	Taeniopygia_guttata
ENSCSEG00000001269	prpf38a	76	91.855	ENSTRUG00000003374	prpf38a	68	91.855	Takifugu_rubripes
ENSCSEG00000001269	prpf38a	76	91.031	ENSTNIG00000005533	prpf38a	72	91.031	Tetraodon_nigroviridis
ENSCSEG00000001269	prpf38a	79	87.013	ENSTBEG00000000725	PRPF38A	71	87.783	Tupaia_belangeri
ENSCSEG00000001269	prpf38a	79	87.013	ENSTTRG00000016139	PRPF38A	71	87.783	Tursiops_truncatus
ENSCSEG00000001269	prpf38a	79	87.013	ENSUAMG00000000625	PRPF38A	71	87.783	Ursus_americanus
ENSCSEG00000001269	prpf38a	79	87.013	ENSUMAG00000022674	PRPF38A	71	87.783	Ursus_maritimus
ENSCSEG00000001269	prpf38a	79	87.446	ENSVPAG00000000907	PRPF38A	71	88.235	Vicugna_pacos
ENSCSEG00000001269	prpf38a	79	87.013	ENSVVUG00000004475	PRPF38A	71	87.783	Vulpes_vulpes
ENSCSEG00000001269	prpf38a	76	87.330	ENSXETG00000008060	prpf38a	71	87.330	Xenopus_tropicalis
ENSCSEG00000001269	prpf38a	76	94.091	ENSXCOG00000007393	prpf38a	74	94.091	Xiphophorus_couchianus
ENSCSEG00000001269	prpf38a	76	93.665	ENSXMAG00000026143	prpf38a	72	93.665	Xiphophorus_maculatus