EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000001315 (Gene tree)
Gene ID: 103389286
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5349 bases
Position: chr14:5326114-5331462
Accession: 103389286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001939	zf-C2H2	PF00096.26	5e-26	1	5
ENSCSEP00000001939	zf-C2H2	PF00096.26	5e-26	2	5
ENSCSEP00000001939	zf-C2H2	PF00096.26	5e-26	3	5
ENSCSEP00000001939	zf-C2H2	PF00096.26	5e-26	4	5
ENSCSEP00000001939	zf-C2H2	PF00096.26	5e-26	5	5
ENSCSEP00000001939	zf-met	PF12874.7	1.7e-08	1	2
ENSCSEP00000001939	zf-met	PF12874.7	1.7e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000001974	-	2173	XM_008324643	ENSCSEP00000001939	325 (aa)	XP_008322865	UPI0007DCA309

Gene Model

Click here to download ENSCSEG00000001315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000001315	gfi1b	58	80.952	ENSCSEG00000017729	GFI1	100	47.761
ENSCSEG00000001315	gfi1b	60	44.538	ENSCSEG00000000356	znf648	99	44.538
ENSCSEG00000001315	gfi1b	60	45.625	ENSCSEG00000004273	-	72	45.625
ENSCSEG00000001315	gfi1b	56	42.593	ENSCSEG00000018497	-	51	42.593
ENSCSEG00000001315	gfi1b	52	33.884	ENSCSEG00000021022	-	58	33.884
ENSCSEG00000001315	gfi1b	50	40.000	ENSCSEG00000017606	zbtb47b	60	40.000
ENSCSEG00000001315	gfi1b	58	46.429	ENSCSEG00000020696	-	98	46.875
ENSCSEG00000001315	gfi1b	88	44.578	ENSCSEG00000008502	-	90	44.578
ENSCSEG00000001315	gfi1b	50	44.275	ENSCSEG00000010453	-	55	44.275
ENSCSEG00000001315	gfi1b	57	42.500	ENSCSEG00000001748	-	96	41.176
ENSCSEG00000001315	gfi1b	64	40.373	ENSCSEG00000004721	-	67	40.373
ENSCSEG00000001315	gfi1b	57	43.011	ENSCSEG00000011586	znf236	73	39.456
ENSCSEG00000001315	gfi1b	51	35.632	ENSCSEG00000019599	-	64	35.632
ENSCSEG00000001315	gfi1b	56	43.750	ENSCSEG00000004210	-	97	43.750
ENSCSEG00000001315	gfi1b	53	38.318	ENSCSEG00000009739	snai1a	59	38.202
ENSCSEG00000001315	gfi1b	55	37.736	ENSCSEG00000015585	-	91	37.736
ENSCSEG00000001315	gfi1b	52	37.791	ENSCSEG00000014637	-	84	37.791
ENSCSEG00000001315	gfi1b	51	41.212	ENSCSEG00000019848	-	54	41.212
ENSCSEG00000001315	gfi1b	62	40.397	ENSCSEG00000008903	-	84	40.397
ENSCSEG00000001315	gfi1b	55	45.000	ENSCSEG00000005974	-	86	44.366
ENSCSEG00000001315	gfi1b	63	40.854	ENSCSEG00000018535	-	85	42.222
ENSCSEG00000001315	gfi1b	53	43.220	ENSCSEG00000001168	-	76	43.220
ENSCSEG00000001315	gfi1b	74	36.620	ENSCSEG00000005491	-	83	36.620
ENSCSEG00000001315	gfi1b	50	50.667	ENSCSEG00000019047	-	76	50.667
ENSCSEG00000001315	gfi1b	64	46.341	ENSCSEG00000008539	-	86	46.341
ENSCSEG00000001315	gfi1b	50	43.125	ENSCSEG00000010423	-	56	43.125
ENSCSEG00000001315	gfi1b	57	46.341	ENSCSEG00000003757	-	98	46.341
ENSCSEG00000001315	gfi1b	56	44.375	ENSCSEG00000013398	-	85	44.375
ENSCSEG00000001315	gfi1b	56	42.105	ENSCSEG00000013879	znf319b	82	42.105
ENSCSEG00000001315	gfi1b	85	38.788	ENSCSEG00000004265	-	76	38.788
ENSCSEG00000001315	gfi1b	64	40.000	ENSCSEG00000019029	-	95	43.038
ENSCSEG00000001315	gfi1b	50	48.750	ENSCSEG00000008510	-	53	48.750
ENSCSEG00000001315	gfi1b	53	40.816	ENSCSEG00000003536	znf341	55	40.816
ENSCSEG00000001315	gfi1b	52	43.671	ENSCSEG00000001771	-	59	43.671
ENSCSEG00000001315	gfi1b	58	41.096	ENSCSEG00000018829	-	70	41.096
ENSCSEG00000001315	gfi1b	53	45.946	ENSCSEG00000018822	-	89	45.946
ENSCSEG00000001315	gfi1b	54	51.724	ENSCSEG00000007055	-	96	41.880
ENSCSEG00000001315	gfi1b	75	40.000	ENSCSEG00000005983	-	93	40.000
ENSCSEG00000001315	gfi1b	54	41.358	ENSCSEG00000020730	-	84	41.722
ENSCSEG00000001315	gfi1b	58	40.000	ENSCSEG00000004348	-	79	40.000
ENSCSEG00000001315	gfi1b	53	34.694	ENSCSEG00000018571	-	54	34.694
ENSCSEG00000001315	gfi1b	55	39.773	ENSCSEG00000019979	prdm5	72	39.773
ENSCSEG00000001315	gfi1b	54	43.609	ENSCSEG00000005935	ZNF319	90	43.609
ENSCSEG00000001315	gfi1b	51	40.541	ENSCSEG00000010311	snai2	56	40.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001315	gfi1b	100	77.914	ENSAPOG00000001296	gfi1b	100	77.914	Acanthochromis_polyacanthus
ENSCSEG00000001315	gfi1b	99	69.846	ENSACIG00000002190	gfi1b	99	69.846	Amphilophus_citrinellus
ENSCSEG00000001315	gfi1b	100	77.607	ENSAOCG00000021187	gfi1b	100	77.607	Amphiprion_ocellaris
ENSCSEG00000001315	gfi1b	100	78.221	ENSAPEG00000016196	gfi1b	100	78.221	Amphiprion_percula
ENSCSEG00000001315	gfi1b	100	79.341	ENSATEG00000002534	gfi1b	100	79.341	Anabas_testudineus
ENSCSEG00000001315	gfi1b	100	58.702	ENSAPLG00000003373	GFI1B	100	58.702	Anas_platyrhynchos
ENSCSEG00000001315	gfi1b	100	73.636	ENSACLG00000027053	gfi1b	100	73.636	Astatotilapia_calliptera
ENSCSEG00000001315	gfi1b	100	68.129	ENSAMXG00000037544	GFI1B	100	68.129	Astyanax_mexicanus
ENSCSEG00000001315	gfi1b	100	57.647	ENSCAPG00000010404	GFI1B	100	57.647	Cavia_aperea
ENSCSEG00000001315	gfi1b	100	56.647	ENSCPBG00000021186	GFI1B	100	56.647	Chrysemys_picta_bellii
ENSCSEG00000001315	gfi1b	100	76.308	ENSCVAG00000017168	gfi1b	100	76.308	Cyprinodon_variegatus
ENSCSEG00000001315	gfi1b	100	67.742	ENSDARG00000079947	gfi1b	99	83.613	Danio_rerio
ENSCSEG00000001315	gfi1b	68	50.909	ENSEEUG00000012609	-	97	50.909	Erinaceus_europaeus
ENSCSEG00000001315	gfi1b	100	71.976	ENSELUG00000016933	gfi1b	100	71.976	Esox_lucius
ENSCSEG00000001315	gfi1b	100	53.639	ENSFALG00000001479	GFI1B	100	53.639	Ficedula_albicollis
ENSCSEG00000001315	gfi1b	100	79.819	ENSFHEG00000015138	gfi1b	100	79.819	Fundulus_heteroclitus
ENSCSEG00000001315	gfi1b	75	81.633	ENSGMOG00000019123	gfi1b	91	81.633	Gadus_morhua
ENSCSEG00000001315	gfi1b	100	58.112	ENSGALG00000003478	GFI1B	100	58.112	Gallus_gallus
ENSCSEG00000001315	gfi1b	73	90.254	ENSGAFG00000003059	gfi1b	100	90.254	Gambusia_affinis
ENSCSEG00000001315	gfi1b	100	70.571	ENSGACG00000018134	gfi1b	100	70.571	Gasterosteus_aculeatus
ENSCSEG00000001315	gfi1b	100	59.036	ENSGAGG00000021327	GFI1B	100	59.036	Gopherus_agassizii
ENSCSEG00000001315	gfi1b	100	73.636	ENSHBUG00000005451	gfi1b	100	73.636	Haplochromis_burtoni
ENSCSEG00000001315	gfi1b	100	74.242	ENSHCOG00000013713	gfi1b	100	74.154	Hippocampus_comes
ENSCSEG00000001315	gfi1b	100	68.452	ENSIPUG00000012769	gfi1b	100	68.452	Ictalurus_punctatus
ENSCSEG00000001315	gfi1b	99	50.529	ENSJJAG00000016355	Gfi1b	100	50.529	Jaculus_jaculus
ENSCSEG00000001315	gfi1b	100	79.394	ENSKMAG00000016047	gfi1b	100	79.394	Kryptolebias_marmoratus
ENSCSEG00000001315	gfi1b	100	77.844	ENSLBEG00000020297	gfi1b	99	77.477	Labrus_bergylta
ENSCSEG00000001315	gfi1b	100	58.929	ENSLACG00000012207	GFI1B	100	58.929	Latimeria_chalumnae
ENSCSEG00000001315	gfi1b	100	66.176	ENSLOCG00000005750	gfi1b	100	66.176	Lepisosteus_oculatus
ENSCSEG00000001315	gfi1b	100	56.447	ENSLAFG00000022367	GFI1B	100	57.267	Loxodonta_africana
ENSCSEG00000001315	gfi1b	100	82.424	ENSMAMG00000003040	gfi1b	100	82.424	Mastacembelus_armatus
ENSCSEG00000001315	gfi1b	99	73.556	ENSMZEG00005015594	gfi1b	99	73.556	Maylandia_zebra
ENSCSEG00000001315	gfi1b	100	58.112	ENSMGAG00000006129	GFI1B	100	58.112	Meleagris_gallopavo
ENSCSEG00000001315	gfi1b	100	77.946	ENSMMOG00000011764	gfi1b	100	77.946	Mola_mola
ENSCSEG00000001315	gfi1b	100	53.571	ENSMODG00000012600	GFI1B	100	53.571	Monodelphis_domestica
ENSCSEG00000001315	gfi1b	100	79.394	ENSMALG00000004034	gfi1b	100	79.394	Monopterus_albus
ENSCSEG00000001315	gfi1b	99	57.396	ENSNGAG00000003333	Gfi1b	100	57.396	Nannospalax_galili
ENSCSEG00000001315	gfi1b	100	73.414	ENSNBRG00000012391	gfi1b	100	73.414	Neolamprologus_brichardi
ENSCSEG00000001315	gfi1b	100	73.112	ENSONIG00000013011	gfi1b	94	92.179	Oreochromis_niloticus
ENSCSEG00000001315	gfi1b	100	59.639	ENSOANG00000014723	GFI1B	100	59.639	Ornithorhynchus_anatinus
ENSCSEG00000001315	gfi1b	84	71.377	ENSORLG00000014390	GFI1B	96	71.377	Oryzias_latipes
ENSCSEG00000001315	gfi1b	100	76.220	ENSORLG00020003719	GFI1B	100	76.220	Oryzias_latipes_hni
ENSCSEG00000001315	gfi1b	100	75.915	ENSORLG00015017142	gfi1b	100	75.915	Oryzias_latipes_hsok
ENSCSEG00000001315	gfi1b	100	76.615	ENSOMEG00000015149	GFI1B	100	76.380	Oryzias_melastigma
ENSCSEG00000001315	gfi1b	100	58.160	ENSOGAG00000008879	GFI1B	100	56.897	Otolemur_garnettii
ENSCSEG00000001315	gfi1b	100	67.456	ENSPKIG00000007643	gfi1b	100	67.456	Paramormyrops_kingsleyae
ENSCSEG00000001315	gfi1b	100	58.501	ENSPSIG00000012112	GFI1B	100	58.501	Pelodiscus_sinensis
ENSCSEG00000001315	gfi1b	99	69.394	ENSPMGG00000006021	gfi1b	99	69.394	Periophthalmus_magnuspinnatus
ENSCSEG00000001315	gfi1b	100	52.877	ENSPCIG00000019724	GFI1B	100	52.877	Phascolarctos_cinereus
ENSCSEG00000001315	gfi1b	100	78.635	ENSPFOG00000003460	gfi1b	100	78.635	Poecilia_formosa
ENSCSEG00000001315	gfi1b	100	77.353	ENSPLAG00000017181	GFI1B	100	77.353	Poecilia_latipinna
ENSCSEG00000001315	gfi1b	100	79.758	ENSPLAG00000021960	GFI1B	100	79.758	Poecilia_latipinna
ENSCSEG00000001315	gfi1b	100	79.758	ENSPMEG00000001556	GFI1B	100	79.758	Poecilia_mexicana
ENSCSEG00000001315	gfi1b	100	79.758	ENSPMEG00000019220	gfi1b	100	79.758	Poecilia_mexicana
ENSCSEG00000001315	gfi1b	100	79.758	ENSPREG00000021718	gfi1b	100	79.758	Poecilia_reticulata
ENSCSEG00000001315	gfi1b	100	73.252	ENSPNYG00000018422	gfi1b	100	73.252	Pundamilia_nyererei
ENSCSEG00000001315	gfi1b	100	69.027	ENSPNAG00000021118	gfi1b	100	69.027	Pygocentrus_nattereri
ENSCSEG00000001315	gfi1b	100	48.098	ENSSHAG00000006462	GFI1B	100	48.098	Sarcophilus_harrisii
ENSCSEG00000001315	gfi1b	83	62.284	ENSSFOG00015011566	gfi1b	90	62.284	Scleropages_formosus
ENSCSEG00000001315	gfi1b	100	79.217	ENSSMAG00000015181	gfi1b	99	79.268	Scophthalmus_maximus
ENSCSEG00000001315	gfi1b	100	82.424	ENSSDUG00000011604	gfi1b	100	82.424	Seriola_dumerili
ENSCSEG00000001315	gfi1b	100	81.873	ENSSLDG00000013823	gfi1b	100	81.873	Seriola_lalandi_dorsalis
ENSCSEG00000001315	gfi1b	100	48.851	ENSSPUG00000016039	GFI1B	100	48.851	Sphenodon_punctatus
ENSCSEG00000001315	gfi1b	100	79.755	ENSSPAG00000022914	gfi1b	100	79.755	Stegastes_partitus
ENSCSEG00000001315	gfi1b	51	92.105	ENSTGUG00000005282	-	99	92.105	Taeniopygia_guttata
ENSCSEG00000001315	gfi1b	53	54.701	ENSTGUG00000015953	-	61	54.701	Taeniopygia_guttata
ENSCSEG00000001315	gfi1b	100	76.364	ENSTRUG00000004525	gfi1b	100	76.364	Takifugu_rubripes
ENSCSEG00000001315	gfi1b	100	75.152	ENSTNIG00000003834	gfi1b	100	75.152	Tetraodon_nigroviridis
ENSCSEG00000001315	gfi1b	100	43.605	ENSTBEG00000014459	GFI1B	100	43.605	Tupaia_belangeri
ENSCSEG00000001315	gfi1b	100	54.277	ENSXETG00000006263	gfi1b	100	55.090	Xenopus_tropicalis
ENSCSEG00000001315	gfi1b	100	80.060	ENSXMAG00000027589	gfi1b	100	80.060	Xiphophorus_maculatus