EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001331 (Gene tree)
Gene ID: 103385773
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: mitochondrial mRNA pseudouridine synthase Trub2-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5717 bases
Position: chr11:1906929-1912645
Accession: 103385773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000001962	TruB_N	PF01509.18	3.7e-21	1	1
ENSCSEP00000001967	TruB_N	PF01509.18	3.7e-21	1	1
ENSCSEP00000001977	TruB_N	PF01509.18	3.7e-21	1	1
ENSCSEP00000001987	TruB_N	PF01509.18	3.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000002012	-	1002	-	ENSCSEP00000001977	333 (aa)	-	UPI000495DFF6
ENSCSET00000002022	-	1717	XM_008319758	ENSCSEP00000001987	333 (aa)	XP_008317980	UPI000495DFF6
ENSCSET00000002002	-	1002	-	ENSCSEP00000001967	333 (aa)	-	UPI000495DFF6
ENSCSET00000001997	-	1002	-	ENSCSEP00000001962	333 (aa)	-	UPI000495DFF6

Gene Model

Click here to download ENSCSEG00000001331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001331	trub2	83	55.197	ENSG00000167112	TRUB2	84	55.197	Homo_sapiens
ENSCSEG00000001331	trub2	56	59.358	ENSAPOG00000018216	-	89	59.358	Acanthochromis_polyacanthus
ENSCSEG00000001331	trub2	98	51.070	ENSAPOG00000018284	-	94	66.471	Acanthochromis_polyacanthus
ENSCSEG00000001331	trub2	74	66.667	ENSAPOG00000015733	trub2	88	66.667	Acanthochromis_polyacanthus
ENSCSEG00000001331	trub2	84	56.383	ENSAMEG00000015395	TRUB2	85	56.383	Ailuropoda_melanoleuca
ENSCSEG00000001331	trub2	94	65.397	ENSACIG00000016500	trub2	95	65.397	Amphilophus_citrinellus
ENSCSEG00000001331	trub2	98	66.667	ENSAOCG00000002330	trub2	95	66.667	Amphiprion_ocellaris
ENSCSEG00000001331	trub2	98	66.361	ENSAPEG00000013177	trub2	95	66.361	Amphiprion_percula
ENSCSEG00000001331	trub2	94	64.968	ENSATEG00000011371	trub2	98	64.968	Anabas_testudineus
ENSCSEG00000001331	trub2	82	49.097	ENSAPLG00000009254	TRUB2	90	49.821	Anas_platyrhynchos
ENSCSEG00000001331	trub2	84	51.957	ENSACAG00000007331	TRUB2	85	51.957	Anolis_carolinensis
ENSCSEG00000001331	trub2	83	55.755	ENSANAG00000036234	TRUB2	89	55.755	Aotus_nancymaae
ENSCSEG00000001331	trub2	94	66.349	ENSACLG00000010793	trub2	95	66.349	Astatotilapia_calliptera
ENSCSEG00000001331	trub2	90	58.416	ENSAMXG00000031679	trub2	86	58.416	Astyanax_mexicanus
ENSCSEG00000001331	trub2	83	55.197	ENSCJAG00000020009	TRUB2	84	55.197	Callithrix_jacchus
ENSCSEG00000001331	trub2	83	55.036	ENSCAFG00000020068	TRUB2	84	55.036	Canis_familiaris
ENSCSEG00000001331	trub2	51	53.801	ENSCAFG00020017325	-	96	53.801	Canis_lupus_dingo
ENSCSEG00000001331	trub2	83	54.152	ENSCHIG00000021160	TRUB2	84	54.152	Capra_hircus
ENSCSEG00000001331	trub2	83	54.480	ENSTSYG00000034163	TRUB2	84	54.480	Carlito_syrichta
ENSCSEG00000001331	trub2	70	53.617	ENSCAPG00000000223	TRUB2	82	50.781	Cavia_aperea
ENSCSEG00000001331	trub2	86	52.431	ENSCPOG00000013535	TRUB2	91	49.724	Cavia_porcellus
ENSCSEG00000001331	trub2	83	54.874	ENSCCAG00000026531	-	85	54.874	Cebus_capucinus
ENSCSEG00000001331	trub2	83	52.347	ENSCCAG00000028463	-	84	52.347	Cebus_capucinus
ENSCSEG00000001331	trub2	83	55.396	ENSCATG00000038234	TRUB2	84	55.396	Cercocebus_atys
ENSCSEG00000001331	trub2	83	53.237	ENSCLAG00000001702	TRUB2	87	52.047	Chinchilla_lanigera
ENSCSEG00000001331	trub2	83	52.330	ENSCSAG00000014117	TRUB2	84	52.330	Chlorocebus_sabaeus
ENSCSEG00000001331	trub2	83	51.812	ENSCHOG00000001555	TRUB2	84	51.812	Choloepus_hoffmanni
ENSCSEG00000001331	trub2	84	53.929	ENSCPBG00000025186	TRUB2	82	53.929	Chrysemys_picta_bellii
ENSCSEG00000001331	trub2	91	35.987	ENSCSAVG00000003930	-	95	35.987	Ciona_savignyi
ENSCSEG00000001331	trub2	83	48.201	ENSCANG00000016135	TRUB2	82	48.201	Colobus_angolensis_palliatus
ENSCSEG00000001331	trub2	83	52.518	ENSCGRG00001024441	Trub2	91	50.292	Cricetulus_griseus_chok1gshd
ENSCSEG00000001331	trub2	83	52.518	ENSCGRG00000005633	Trub2	84	52.518	Cricetulus_griseus_crigri
ENSCSEG00000001331	trub2	89	67.340	ENSCVAG00000009901	trub2	89	67.340	Cyprinodon_variegatus
ENSCSEG00000001331	trub2	97	56.098	ENSDARG00000028379	trub2	93	56.098	Danio_rerio
ENSCSEG00000001331	trub2	79	35.587	ENSDNOG00000043967	-	85	35.587	Dasypus_novemcinctus
ENSCSEG00000001331	trub2	83	53.791	ENSDNOG00000045679	-	83	53.791	Dasypus_novemcinctus
ENSCSEG00000001331	trub2	83	55.036	ENSDORG00000016222	Trub2	87	55.036	Dipodomys_ordii
ENSCSEG00000001331	trub2	82	32.753	FBgn0033060	CG7849	87	32.753	Drosophila_melanogaster
ENSCSEG00000001331	trub2	83	52.708	ENSETEG00000009114	TRUB2	86	52.708	Echinops_telfairi
ENSCSEG00000001331	trub2	69	46.032	ENSEBUG00000015723	trub2	81	46.032	Eptatretus_burgeri
ENSCSEG00000001331	trub2	83	55.755	ENSEASG00005016819	TRUB2	84	55.755	Equus_asinus_asinus
ENSCSEG00000001331	trub2	83	54.676	ENSECAG00000023520	TRUB2	84	54.676	Equus_caballus
ENSCSEG00000001331	trub2	83	53.597	ENSEEUG00000008908	TRUB2	84	53.597	Erinaceus_europaeus
ENSCSEG00000001331	trub2	91	59.062	ENSELUG00000002376	trub2	99	59.062	Esox_lucius
ENSCSEG00000001331	trub2	83	54.676	ENSFCAG00000005839	TRUB2	86	54.676	Felis_catus
ENSCSEG00000001331	trub2	74	50.806	ENSFALG00000001364	TRUB2	80	50.806	Ficedula_albicollis
ENSCSEG00000001331	trub2	83	53.763	ENSFDAG00000021374	TRUB2	88	51.744	Fukomys_damarensis
ENSCSEG00000001331	trub2	89	62.416	ENSFHEG00000014655	trub2	88	62.416	Fundulus_heteroclitus
ENSCSEG00000001331	trub2	89	57.095	ENSGMOG00000000981	trub2	100	57.095	Gadus_morhua
ENSCSEG00000001331	trub2	82	53.309	ENSGALG00000004920	TRUB2	67	53.309	Gallus_gallus
ENSCSEG00000001331	trub2	86	65.972	ENSGAFG00000010107	trub2	97	60.856	Gambusia_affinis
ENSCSEG00000001331	trub2	96	65.421	ENSGACG00000001476	trub2	97	65.421	Gasterosteus_aculeatus
ENSCSEG00000001331	trub2	95	48.297	ENSGAGG00000022872	TRUB2	96	48.297	Gopherus_agassizii
ENSCSEG00000001331	trub2	83	54.480	ENSGGOG00000014780	TRUB2	84	54.480	Gorilla_gorilla
ENSCSEG00000001331	trub2	94	66.667	ENSHBUG00000022384	trub2	95	66.667	Haplochromis_burtoni
ENSCSEG00000001331	trub2	83	53.047	ENSHGLG00000016715	TRUB2	84	53.047	Heterocephalus_glaber_female
ENSCSEG00000001331	trub2	83	53.047	ENSHGLG00100016548	TRUB2	84	53.047	Heterocephalus_glaber_male
ENSCSEG00000001331	trub2	95	68.354	ENSHCOG00000017748	trub2	97	68.354	Hippocampus_comes
ENSCSEG00000001331	trub2	90	57.947	ENSIPUG00000017725	hdhd3	53	57.947	Ictalurus_punctatus
ENSCSEG00000001331	trub2	83	53.597	ENSSTOG00000022617	-	84	53.597	Ictidomys_tridecemlineatus
ENSCSEG00000001331	trub2	83	53.957	ENSSTOG00000008024	-	88	52.047	Ictidomys_tridecemlineatus
ENSCSEG00000001331	trub2	83	47.670	ENSJJAG00000019181	Trub2	83	47.670	Jaculus_jaculus
ENSCSEG00000001331	trub2	99	62.575	ENSKMAG00000007861	trub2	99	62.575	Kryptolebias_marmoratus
ENSCSEG00000001331	trub2	99	64.157	ENSLBEG00000000907	trub2	98	64.157	Labrus_bergylta
ENSCSEG00000001331	trub2	86	54.483	ENSLACG00000001515	TRUB2	85	54.483	Latimeria_chalumnae
ENSCSEG00000001331	trub2	86	61.379	ENSLOCG00000000885	trub2	95	61.379	Lepisosteus_oculatus
ENSCSEG00000001331	trub2	83	53.791	ENSLAFG00000002174	TRUB2	91	53.791	Loxodonta_africana
ENSCSEG00000001331	trub2	83	55.197	ENSMFAG00000000881	TRUB2	84	55.197	Macaca_fascicularis
ENSCSEG00000001331	trub2	83	55.197	ENSMMUG00000014146	TRUB2	84	55.197	Macaca_mulatta
ENSCSEG00000001331	trub2	83	55.197	ENSMNEG00000011189	TRUB2	84	55.197	Macaca_nemestrina
ENSCSEG00000001331	trub2	83	55.036	ENSMLEG00000037270	TRUB2	84	55.036	Mandrillus_leucophaeus
ENSCSEG00000001331	trub2	88	67.905	ENSMAMG00000023643	trub2	98	67.905	Mastacembelus_armatus
ENSCSEG00000001331	trub2	94	66.667	ENSMZEG00005016018	trub2	95	66.667	Maylandia_zebra
ENSCSEG00000001331	trub2	55	53.552	ENSMGAG00000003894	TRUB2	92	53.552	Meleagris_gallopavo
ENSCSEG00000001331	trub2	83	53.237	ENSMAUG00000010403	Trub2	95	48.925	Mesocricetus_auratus
ENSCSEG00000001331	trub2	83	54.317	ENSMICG00000047032	TRUB2	84	54.317	Microcebus_murinus
ENSCSEG00000001331	trub2	89	51.178	ENSMOCG00000014291	Trub2	96	51.178	Microtus_ochrogaster
ENSCSEG00000001331	trub2	96	67.593	ENSMMOG00000021674	trub2	99	67.593	Mola_mola
ENSCSEG00000001331	trub2	84	52.500	ENSMODG00000005940	TRUB2	95	52.500	Monodelphis_domestica
ENSCSEG00000001331	trub2	96	66.258	ENSMALG00000021231	trub2	96	66.258	Monopterus_albus
ENSCSEG00000001331	trub2	83	51.613	MGP_CAROLIEiJ_G0023368	Trub2	95	47.059	Mus_caroli
ENSCSEG00000001331	trub2	83	51.254	ENSMUSG00000039826	Trub2	95	46.524	Mus_musculus
ENSCSEG00000001331	trub2	83	51.613	MGP_PahariEiJ_G0024826	Trub2	88	49.419	Mus_pahari
ENSCSEG00000001331	trub2	83	51.254	MGP_SPRETEiJ_G0024286	Trub2	95	47.059	Mus_spretus
ENSCSEG00000001331	trub2	84	54.965	ENSMPUG00000013206	TRUB2	77	54.965	Mustela_putorius_furo
ENSCSEG00000001331	trub2	83	54.676	ENSMLUG00000005256	TRUB2	83	54.676	Myotis_lucifugus
ENSCSEG00000001331	trub2	83	53.069	ENSNGAG00000018679	Trub2	84	53.069	Nannospalax_galili
ENSCSEG00000001331	trub2	94	67.619	ENSNBRG00000016294	trub2	95	67.619	Neolamprologus_brichardi
ENSCSEG00000001331	trub2	83	54.839	ENSNLEG00000017556	TRUB2	84	54.839	Nomascus_leucogenys
ENSCSEG00000001331	trub2	83	54.513	ENSMEUG00000000484	TRUB2	89	54.513	Notamacropus_eugenii
ENSCSEG00000001331	trub2	83	50.181	ENSOPRG00000001981	TRUB2	84	50.181	Ochotona_princeps
ENSCSEG00000001331	trub2	83	53.791	ENSODEG00000017292	TRUB2	88	51.462	Octodon_degus
ENSCSEG00000001331	trub2	94	66.349	ENSONIG00000004230	trub2	95	66.349	Oreochromis_niloticus
ENSCSEG00000001331	trub2	56	50.000	ENSOANG00000029023	-	84	50.000	Ornithorhynchus_anatinus
ENSCSEG00000001331	trub2	83	53.597	ENSOCUG00000026296	TRUB2	76	53.597	Oryctolagus_cuniculus
ENSCSEG00000001331	trub2	97	61.162	ENSORLG00000020011	trub2	98	61.774	Oryzias_latipes
ENSCSEG00000001331	trub2	89	65.541	ENSORLG00020011028	trub2	86	65.541	Oryzias_latipes_hni
ENSCSEG00000001331	trub2	97	61.491	ENSORLG00015007494	trub2	98	61.491	Oryzias_latipes_hsok
ENSCSEG00000001331	trub2	96	66.667	ENSOMEG00000006702	trub2	98	66.667	Oryzias_melastigma
ENSCSEG00000001331	trub2	59	56.410	ENSOARG00000003785	-	81	55.122	Ovis_aries
ENSCSEG00000001331	trub2	83	55.036	ENSOARG00000010579	-	84	55.036	Ovis_aries
ENSCSEG00000001331	trub2	83	55.197	ENSPPAG00000043146	TRUB2	84	55.197	Pan_paniscus
ENSCSEG00000001331	trub2	83	54.676	ENSPPRG00000006307	TRUB2	86	54.676	Panthera_pardus
ENSCSEG00000001331	trub2	83	55.036	ENSPTIG00000012366	TRUB2	86	55.036	Panthera_tigris_altaica
ENSCSEG00000001331	trub2	83	54.839	ENSPTRG00000052151	-	84	54.839	Pan_troglodytes
ENSCSEG00000001331	trub2	83	54.839	ENSPTRG00000021423	TRUB2	84	54.839	Pan_troglodytes
ENSCSEG00000001331	trub2	83	55.197	ENSPANG00000025856	TRUB2	84	55.197	Papio_anubis
ENSCSEG00000001331	trub2	89	62.376	ENSPKIG00000019769	trub2	98	62.376	Paramormyrops_kingsleyae
ENSCSEG00000001331	trub2	83	50.178	ENSPSIG00000015701	TRUB2	93	50.178	Pelodiscus_sinensis
ENSCSEG00000001331	trub2	91	63.844	ENSPMGG00000010206	trub2	96	63.844	Periophthalmus_magnuspinnatus
ENSCSEG00000001331	trub2	89	50.168	ENSPEMG00000017893	Trub2	91	49.708	Peromyscus_maniculatus_bairdii
ENSCSEG00000001331	trub2	83	53.791	ENSPCIG00000026731	TRUB2	89	53.791	Phascolarctos_cinereus
ENSCSEG00000001331	trub2	83	66.786	ENSPFOG00000018018	trub2	86	60.923	Poecilia_formosa
ENSCSEG00000001331	trub2	83	67.143	ENSPLAG00000010484	trub2	93	61.231	Poecilia_latipinna
ENSCSEG00000001331	trub2	95	61.875	ENSPMEG00000012913	trub2	95	61.875	Poecilia_mexicana
ENSCSEG00000001331	trub2	86	67.014	ENSPREG00000002549	trub2	89	65.232	Poecilia_reticulata
ENSCSEG00000001331	trub2	83	54.839	ENSPPYG00000019650	TRUB2	85	54.839	Pongo_abelii
ENSCSEG00000001331	trub2	83	53.957	ENSPCAG00000015068	TRUB2	85	53.957	Procavia_capensis
ENSCSEG00000001331	trub2	83	55.396	ENSPCOG00000017100	TRUB2	84	55.396	Propithecus_coquereli
ENSCSEG00000001331	trub2	77	55.000	ENSPVAG00000001224	TRUB2	87	55.000	Pteropus_vampyrus
ENSCSEG00000001331	trub2	94	66.667	ENSPNYG00000013666	trub2	95	66.667	Pundamilia_nyererei
ENSCSEG00000001331	trub2	90	57.566	ENSPNAG00000017292	trub2	86	57.566	Pygocentrus_nattereri
ENSCSEG00000001331	trub2	83	52.688	ENSRNOG00000043189	Trub2	86	52.688	Rattus_norvegicus
ENSCSEG00000001331	trub2	83	49.281	ENSRBIG00000006965	TRUB2	82	49.281	Rhinopithecus_bieti
ENSCSEG00000001331	trub2	83	55.396	ENSRROG00000042928	TRUB2	84	55.396	Rhinopithecus_roxellana
ENSCSEG00000001331	trub2	83	54.317	ENSSBOG00000022439	TRUB2	84	54.317	Saimiri_boliviensis_boliviensis
ENSCSEG00000001331	trub2	86	64.685	ENSSFOG00015013391	trub2	92	64.685	Scleropages_formosus
ENSCSEG00000001331	trub2	95	67.812	ENSSMAG00000020820	trub2	97	67.812	Scophthalmus_maximus
ENSCSEG00000001331	trub2	99	66.168	ENSSDUG00000016928	trub2	99	66.168	Seriola_dumerili
ENSCSEG00000001331	trub2	99	66.467	ENSSLDG00000024701	trub2	99	66.467	Seriola_lalandi_dorsalis
ENSCSEG00000001331	trub2	86	52.448	ENSSPUG00000015515	TRUB2	85	52.448	Sphenodon_punctatus
ENSCSEG00000001331	trub2	100	67.463	ENSSPAG00000017865	trub2	99	67.463	Stegastes_partitus
ENSCSEG00000001331	trub2	83	54.317	ENSSSCG00000005645	TRUB2	79	55.319	Sus_scrofa
ENSCSEG00000001331	trub2	74	50.813	ENSTGUG00000003704	TRUB2	94	50.813	Taeniopygia_guttata
ENSCSEG00000001331	trub2	95	64.984	ENSTRUG00000015499	trub2	96	64.984	Takifugu_rubripes
ENSCSEG00000001331	trub2	87	68.493	ENSTNIG00000014721	trub2	100	68.493	Tetraodon_nigroviridis
ENSCSEG00000001331	trub2	53	51.685	ENSTBEG00000000586	TRUB2	79	51.685	Tupaia_belangeri
ENSCSEG00000001331	trub2	83	52.708	ENSTTRG00000016486	TRUB2	84	52.708	Tursiops_truncatus
ENSCSEG00000001331	trub2	84	54.965	ENSUAMG00000020276	TRUB2	83	54.965	Ursus_americanus
ENSCSEG00000001331	trub2	84	55.319	ENSUMAG00000022051	TRUB2	83	55.319	Ursus_maritimus
ENSCSEG00000001331	trub2	83	42.599	ENSVPAG00000005793	TRUB2	87	42.599	Vicugna_pacos
ENSCSEG00000001331	trub2	83	55.036	ENSVVUG00000013451	TRUB2	79	55.036	Vulpes_vulpes
ENSCSEG00000001331	trub2	87	54.545	ENSXETG00000003973	trub2	90	54.545	Xenopus_tropicalis
ENSCSEG00000001331	trub2	94	63.694	ENSXCOG00000008759	trub2	93	63.694	Xiphophorus_couchianus
ENSCSEG00000001331	trub2	94	63.694	ENSXMAG00000015478	trub2	93	63.694	Xiphophorus_maculatus