EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000001385 (Gene tree)
Gene ID: 103385768
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6663 bases
Position: chr11:1939625-1946287
Accession: 103385768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000002048	zf-C2H2	PF00096.26	4.7e-31	1	5
ENSCSEP00000002048	zf-C2H2	PF00096.26	4.7e-31	2	5
ENSCSEP00000002048	zf-C2H2	PF00096.26	4.7e-31	3	5
ENSCSEP00000002048	zf-C2H2	PF00096.26	4.7e-31	4	5
ENSCSEP00000002048	zf-C2H2	PF00096.26	4.7e-31	5	5
ENSCSEP00000002048	zf-met	PF12874.7	4.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000002084	-	1980	XM_017036717	ENSCSEP00000002048	659 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000001385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000001385	patz1	52	35.233	ENSCSEG00000000356	znf648	99	35.233
ENSCSEG00000001385	patz1	54	32.653	ENSCSEG00000016440	zbtb16a	55	32.653
ENSCSEG00000001385	patz1	53	32.099	ENSCSEG00000003536	znf341	51	32.099
ENSCSEG00000001385	patz1	55	32.677	ENSCSEG00000018822	-	89	36.752
ENSCSEG00000001385	patz1	55	35.119	ENSCSEG00000018829	-	65	35.119
ENSCSEG00000001385	patz1	60	31.496	ENSCSEG00000001771	-	60	32.922
ENSCSEG00000001385	patz1	75	38.211	ENSCSEG00000016293	-	92	38.211
ENSCSEG00000001385	patz1	53	36.310	ENSCSEG00000019029	-	95	35.862
ENSCSEG00000001385	patz1	54	33.202	ENSCSEG00000018815	-	83	32.411
ENSCSEG00000001385	patz1	53	31.579	ENSCSEG00000008502	-	69	30.682
ENSCSEG00000001385	patz1	62	35.632	ENSCSEG00000005983	-	92	35.632
ENSCSEG00000001385	patz1	56	34.641	ENSCSEG00000003757	-	99	38.462
ENSCSEG00000001385	patz1	61	30.270	ENSCSEG00000005491	-	66	33.721
ENSCSEG00000001385	patz1	54	36.310	ENSCSEG00000007055	-	94	33.099
ENSCSEG00000001385	patz1	54	31.220	ENSCSEG00000014637	-	87	31.220
ENSCSEG00000001385	patz1	51	33.728	ENSCSEG00000015585	-	85	33.728
ENSCSEG00000001385	patz1	59	30.855	ENSCSEG00000004348	-	80	30.483
ENSCSEG00000001385	patz1	66	31.579	ENSCSEG00000018571	-	53	37.037
ENSCSEG00000001385	patz1	53	34.043	ENSCSEG00000020696	-	93	33.214
ENSCSEG00000001385	patz1	55	34.559	ENSCSEG00000010423	-	57	33.210
ENSCSEG00000001385	patz1	55	36.893	ENSCSEG00000019047	-	78	38.415
ENSCSEG00000001385	patz1	56	30.508	ENSCSEG00000013879	znf319b	78	36.471
ENSCSEG00000001385	patz1	54	33.333	ENSCSEG00000001748	-	96	37.725
ENSCSEG00000001385	patz1	91	36.735	ENSCSEG00000018698	ZBTB14	93	37.097
ENSCSEG00000001385	patz1	54	32.979	ENSCSEG00000015300	zbtb16b	59	32.979
ENSCSEG00000001385	patz1	55	30.387	ENSCSEG00000009915	-	52	31.937
ENSCSEG00000001385	patz1	63	33.058	ENSCSEG00000005974	-	88	35.000
ENSCSEG00000001385	patz1	62	32.308	ENSCSEG00000020730	-	79	35.673
ENSCSEG00000001385	patz1	88	34.555	ENSCSEG00000003731	zbtb24	63	36.517
ENSCSEG00000001385	patz1	52	32.353	ENSCSEG00000008539	-	58	32.353
ENSCSEG00000001385	patz1	57	31.076	ENSCSEG00000018535	-	92	36.145
ENSCSEG00000001385	patz1	53	32.258	ENSCSEG00000013398	-	83	31.984
ENSCSEG00000001385	patz1	55	33.597	ENSCSEG00000004273	-	71	39.456
ENSCSEG00000001385	patz1	71	32.806	ENSCSEG00000004721	-	77	32.016
ENSCSEG00000001385	patz1	59	31.321	ENSCSEG00000019979	prdm5	69	31.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001385	patz1	100	55.278	ENSG00000100105	PATZ1	100	55.307	Homo_sapiens
ENSCSEG00000001385	patz1	99	85.714	ENSAPOG00000018447	patz1	100	77.400	Acanthochromis_polyacanthus
ENSCSEG00000001385	patz1	100	55.062	ENSAMEG00000007074	PATZ1	100	54.965	Ailuropoda_melanoleuca
ENSCSEG00000001385	patz1	100	81.832	ENSACIG00000016779	patz1	100	81.536	Amphilophus_citrinellus
ENSCSEG00000001385	patz1	100	79.885	ENSAPEG00000013354	patz1	100	79.310	Amphiprion_percula
ENSCSEG00000001385	patz1	99	83.818	ENSATEG00000011260	patz1	100	82.003	Anabas_testudineus
ENSCSEG00000001385	patz1	88	55.032	ENSAPLG00000003934	PATZ1	99	55.263	Anas_platyrhynchos
ENSCSEG00000001385	patz1	100	55.278	ENSANAG00000029603	PATZ1	100	55.307	Aotus_nancymaae
ENSCSEG00000001385	patz1	98	63.799	ENSAMXG00000002273	patz1	100	56.723	Astyanax_mexicanus
ENSCSEG00000001385	patz1	100	55.139	ENSBTAG00000005478	PATZ1	100	55.105	Bos_taurus
ENSCSEG00000001385	patz1	100	55.278	ENSCJAG00000010978	PATZ1	100	55.307	Callithrix_jacchus
ENSCSEG00000001385	patz1	100	55.000	ENSCAFG00000013087	PATZ1	100	54.965	Canis_familiaris
ENSCSEG00000001385	patz1	100	55.139	ENSCHIG00000020203	PATZ1	100	55.245	Capra_hircus
ENSCSEG00000001385	patz1	100	55.139	ENSTSYG00000033183	PATZ1	100	55.447	Carlito_syrichta
ENSCSEG00000001385	patz1	100	55.278	ENSCCAG00000028772	PATZ1	100	55.307	Cebus_capucinus
ENSCSEG00000001385	patz1	100	55.000	ENSCATG00000006101	PATZ1	100	55.307	Cercocebus_atys
ENSCSEG00000001385	patz1	100	54.910	ENSCPBG00000011277	PATZ1	100	55.062	Chrysemys_picta_bellii
ENSCSEG00000001385	patz1	100	55.000	ENSCANG00000024972	PATZ1	100	55.307	Colobus_angolensis_palliatus
ENSCSEG00000001385	patz1	100	53.782	ENSCGRG00001004071	Patz1	100	53.287	Cricetulus_griseus_chok1gshd
ENSCSEG00000001385	patz1	93	53.731	ENSCGRG00000004814	Patz1	100	53.204	Cricetulus_griseus_crigri
ENSCSEG00000001385	patz1	100	79.882	ENSCVAG00000007684	patz1	100	79.882	Cyprinodon_variegatus
ENSCSEG00000001385	patz1	96	67.308	ENSDARG00000076584	patz1	100	59.534	Danio_rerio
ENSCSEG00000001385	patz1	89	54.405	ENSDNOG00000003183	PATZ1	100	54.290	Dasypus_novemcinctus
ENSCSEG00000001385	patz1	100	55.139	ENSDORG00000023834	Patz1	100	55.168	Dipodomys_ordii
ENSCSEG00000001385	patz1	100	55.139	ENSECAG00000025030	PATZ1	100	55.105	Equus_caballus
ENSCSEG00000001385	patz1	100	71.658	ENSELUG00000002333	patz1	100	65.079	Esox_lucius
ENSCSEG00000001385	patz1	100	55.000	ENSFCAG00000030253	PATZ1	100	54.965	Felis_catus
ENSCSEG00000001385	patz1	89	54.400	ENSFALG00000007450	PATZ1	100	54.781	Ficedula_albicollis
ENSCSEG00000001385	patz1	97	52.450	ENSFDAG00000005614	PATZ1	100	52.471	Fukomys_damarensis
ENSCSEG00000001385	patz1	100	77.286	ENSFHEG00000014755	patz1	100	77.333	Fundulus_heteroclitus
ENSCSEG00000001385	patz1	100	66.479	ENSGMOG00000001062	patz1	100	66.337	Gadus_morhua
ENSCSEG00000001385	patz1	100	54.110	ENSGALG00000006934	PATZ1	100	54.558	Gallus_gallus
ENSCSEG00000001385	patz1	100	74.487	ENSGAFG00000010053	patz1	100	74.779	Gambusia_affinis
ENSCSEG00000001385	patz1	88	55.267	ENSGAGG00000003214	PATZ1	100	54.886	Gopherus_agassizii
ENSCSEG00000001385	patz1	100	55.139	ENSGGOG00000017171	PATZ1	100	55.307	Gorilla_gorilla
ENSCSEG00000001385	patz1	100	68.613	ENSHCOG00000017644	patz1	91	77.193	Hippocampus_comes
ENSCSEG00000001385	patz1	97	67.593	ENSIPUG00000017653	patz1	99	56.685	Ictalurus_punctatus
ENSCSEG00000001385	patz1	100	55.000	ENSSTOG00000020707	PATZ1	100	54.965	Ictidomys_tridecemlineatus
ENSCSEG00000001385	patz1	98	55.840	ENSJJAG00000015259	Patz1	99	55.824	Jaculus_jaculus
ENSCSEG00000001385	patz1	100	80.236	ENSKMAG00000008157	patz1	100	80.854	Kryptolebias_marmoratus
ENSCSEG00000001385	patz1	100	56.011	ENSLAFG00000002317	PATZ1	100	55.920	Loxodonta_africana
ENSCSEG00000001385	patz1	100	55.278	ENSMFAG00000040968	PATZ1	100	55.307	Macaca_fascicularis
ENSCSEG00000001385	patz1	100	55.278	ENSMNEG00000037588	PATZ1	100	55.307	Macaca_nemestrina
ENSCSEG00000001385	patz1	100	55.000	ENSMLEG00000030938	PATZ1	100	55.307	Mandrillus_leucophaeus
ENSCSEG00000001385	patz1	100	81.127	ENSMAMG00000023652	patz1	100	80.622	Mastacembelus_armatus
ENSCSEG00000001385	patz1	88	55.041	ENSMGAG00000008439	PATZ1	100	55.444	Meleagris_gallopavo
ENSCSEG00000001385	patz1	100	55.105	ENSMAUG00000004129	Patz1	100	54.749	Mesocricetus_auratus
ENSCSEG00000001385	patz1	100	55.139	ENSMICG00000005430	PATZ1	100	55.447	Microcebus_murinus
ENSCSEG00000001385	patz1	100	55.385	ENSMOCG00000014488	Patz1	100	55.168	Microtus_ochrogaster
ENSCSEG00000001385	patz1	81	77.881	ENSMMOG00000021679	patz1	85	85.965	Mola_mola
ENSCSEG00000001385	patz1	100	75.862	ENSMALG00000021172	patz1	100	75.718	Monopterus_albus
ENSCSEG00000001385	patz1	100	55.182	MGP_CAROLIEiJ_G0016007	Patz1	100	55.105	Mus_caroli
ENSCSEG00000001385	patz1	100	55.182	ENSMUSG00000020453	Patz1	100	55.168	Mus_musculus
ENSCSEG00000001385	patz1	100	55.182	MGP_PahariEiJ_G0016884	Patz1	100	55.168	Mus_pahari
ENSCSEG00000001385	patz1	100	55.182	MGP_SPRETEiJ_G0016846	Patz1	100	55.168	Mus_spretus
ENSCSEG00000001385	patz1	100	55.201	ENSMLUG00000009942	PATZ1	100	55.168	Myotis_lucifugus
ENSCSEG00000001385	patz1	100	55.245	ENSNGAG00000010268	Patz1	100	55.028	Nannospalax_galili
ENSCSEG00000001385	patz1	100	77.586	ENSNBRG00000016032	patz1	100	77.443	Neolamprologus_brichardi
ENSCSEG00000001385	patz1	71	56.619	ENSMEUG00000016293	PATZ1	100	56.584	Notamacropus_eugenii
ENSCSEG00000001385	patz1	100	55.000	ENSODEG00000003589	PATZ1	100	55.028	Octodon_degus
ENSCSEG00000001385	patz1	100	76.023	ENSONIG00000004248	patz1	100	75.294	Oreochromis_niloticus
ENSCSEG00000001385	patz1	100	55.370	ENSOANG00000014654	PATZ1	100	55.899	Ornithorhynchus_anatinus
ENSCSEG00000001385	patz1	100	74.859	ENSORLG00020010937	patz1	100	74.576	Oryzias_latipes_hni
ENSCSEG00000001385	patz1	100	74.929	ENSORLG00015007396	patz1	100	74.646	Oryzias_latipes_hsok
ENSCSEG00000001385	patz1	99	76.234	ENSOMEG00000006636	patz1	100	73.117	Oryzias_melastigma
ENSCSEG00000001385	patz1	100	55.278	ENSOGAG00000027905	PATZ1	100	55.385	Otolemur_garnettii
ENSCSEG00000001385	patz1	100	55.139	ENSPPAG00000033227	PATZ1	100	55.307	Pan_paniscus
ENSCSEG00000001385	patz1	100	55.000	ENSPPRG00000001573	PATZ1	100	54.965	Panthera_pardus
ENSCSEG00000001385	patz1	88	54.677	ENSPTIG00000007937	PATZ1	91	54.766	Panthera_tigris_altaica
ENSCSEG00000001385	patz1	100	55.139	ENSPTRG00000014268	PATZ1	100	55.307	Pan_troglodytes
ENSCSEG00000001385	patz1	100	55.000	ENSPANG00000006821	PATZ1	100	55.307	Papio_anubis
ENSCSEG00000001385	patz1	100	65.670	ENSPKIG00000019584	patz1	100	65.242	Paramormyrops_kingsleyae
ENSCSEG00000001385	patz1	65	56.193	ENSPSIG00000016553	-	90	56.351	Pelodiscus_sinensis
ENSCSEG00000001385	patz1	68	60.664	ENSPSIG00000011562	-	100	60.143	Pelodiscus_sinensis
ENSCSEG00000001385	patz1	100	70.996	ENSPMGG00000010196	patz1	100	70.376	Periophthalmus_magnuspinnatus
ENSCSEG00000001385	patz1	100	55.245	ENSPEMG00000005321	Patz1	100	55.168	Peromyscus_maniculatus_bairdii
ENSCSEG00000001385	patz1	100	74.926	ENSPLAG00000010425	patz1	100	75.083	Poecilia_latipinna
ENSCSEG00000001385	patz1	100	74.780	ENSPMEG00000000255	patz1	100	75.221	Poecilia_mexicana
ENSCSEG00000001385	patz1	100	76.724	ENSPREG00000002440	patz1	100	76.724	Poecilia_reticulata
ENSCSEG00000001385	patz1	100	55.139	ENSPPYG00000011732	PATZ1	100	55.168	Pongo_abelii
ENSCSEG00000001385	patz1	100	55.139	ENSPCOG00000019729	PATZ1	100	55.447	Propithecus_coquereli
ENSCSEG00000001385	patz1	100	55.000	ENSPVAG00000001749	PATZ1	100	54.965	Pteropus_vampyrus
ENSCSEG00000001385	patz1	100	79.310	ENSPNYG00000013542	patz1	100	79.023	Pundamilia_nyererei
ENSCSEG00000001385	patz1	88	59.259	ENSPNAG00000017222	patz1	100	59.259	Pygocentrus_nattereri
ENSCSEG00000001385	patz1	100	55.000	ENSRBIG00000044231	PATZ1	100	55.307	Rhinopithecus_bieti
ENSCSEG00000001385	patz1	100	55.000	ENSRROG00000037155	PATZ1	100	55.307	Rhinopithecus_roxellana
ENSCSEG00000001385	patz1	100	55.278	ENSSBOG00000003894	PATZ1	100	55.307	Saimiri_boliviensis_boliviensis
ENSCSEG00000001385	patz1	65	89.952	ENSSFOG00015013244	patz1	64	89.952	Scleropages_formosus
ENSCSEG00000001385	patz1	99	54.545	ENSSPUG00000015298	PATZ1	97	54.866	Sphenodon_punctatus
ENSCSEG00000001385	patz1	88	54.723	ENSSSCG00000010027	PATZ1	100	54.934	Sus_scrofa
ENSCSEG00000001385	patz1	100	77.684	ENSTRUG00000015366	patz1	100	77.163	Takifugu_rubripes
ENSCSEG00000001385	patz1	100	54.861	ENSTTRG00000010279	PATZ1	100	54.825	Tursiops_truncatus
ENSCSEG00000001385	patz1	100	52.916	ENSUAMG00000015014	PATZ1	100	52.841	Ursus_americanus
ENSCSEG00000001385	patz1	100	53.582	ENSXETG00000004190	patz1	100	54.232	Xenopus_tropicalis
ENSCSEG00000001385	patz1	100	74.780	ENSXMAG00000015531	patz1	100	75.074	Xiphophorus_maculatus