EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001452 (Gene tree)
Gene ID: 103377489
Gene Symbol: drosha
Alias: drosha|im:7150667|rnasen|zgc:158612
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 54816 bases
Position: chr3:16178702-16233517
Accession: 103377489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000002175	Ribonuclease_3	PF00636.26	1.8e-42	1	2
ENSCSEP00000002175	Ribonuclease_3	PF00636.26	1.8e-42	2	2
ENSCSEP00000002182	Ribonuclease_3	PF00636.26	2.3e-42	1	2
ENSCSEP00000002182	Ribonuclease_3	PF00636.26	2.3e-42	2	2
ENSCSEP00000002182	dsrm	PF00035.26	1.2e-14	1	1
ENSCSEP00000002175	dsrm	PF00035.26	7.5e-10	1	1
ENSCSEP00000002175	Ribonucleas_3_3	PF14622.6	2.1e-44	1	2
ENSCSEP00000002175	Ribonucleas_3_3	PF14622.6	2.1e-44	2	2
ENSCSEP00000002182	Ribonucleas_3_3	PF14622.6	2.4e-44	1	2
ENSCSEP00000002182	Ribonucleas_3_3	PF14622.6	2.4e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000002213	-	3870	-	ENSCSEP00000002175	1289 (aa)	-	-
ENSCSET00000002220	-	4062	XM_008308323	ENSCSEP00000002182	1350 (aa)	XP_008306545	UPI0004963265

Gene Model

Click here to download ENSCSEG00000001452's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001452	drosha	88	80.268	ENSG00000113360	DROSHA	98	73.859	Homo_sapiens
ENSCSEG00000001452	drosha	98	68.891	ENSAMEG00000006000	DROSHA	71	90.309	Ailuropoda_melanoleuca
ENSCSEG00000001452	drosha	72	94.667	ENSACIG00000019308	drosha	95	94.742	Amphilophus_citrinellus
ENSCSEG00000001452	drosha	100	86.062	ENSATEG00000021939	drosha	100	86.146	Anabas_testudineus
ENSCSEG00000001452	drosha	99	84.390	ENSAPLG00000004372	DROSHA	77	87.216	Anas_platyrhynchos
ENSCSEG00000001452	drosha	97	83.317	ENSACAG00000007970	DROSHA	72	86.364	Anolis_carolinensis
ENSCSEG00000001452	drosha	88	77.592	ENSANAG00000020506	DROSHA	94	86.804	Aotus_nancymaae
ENSCSEG00000001452	drosha	100	86.364	ENSACLG00000012227	drosha	100	86.290	Astatotilapia_calliptera
ENSCSEG00000001452	drosha	86	86.254	ENSAMXG00000005582	drosha	99	80.209	Astyanax_mexicanus
ENSCSEG00000001452	drosha	88	80.084	ENSBTAG00000017551	DROSHA	86	81.180	Bos_taurus
ENSCSEG00000001452	drosha	65	34.220	WBGene00009163	drsh-1	76	36.147	Caenorhabditis_elegans
ENSCSEG00000001452	drosha	88	80.351	ENSCJAG00000018881	DROSHA	91	76.910	Callithrix_jacchus
ENSCSEG00000001452	drosha	88	80.351	ENSCAFG00020017559	DROSHA	96	94.152	Canis_lupus_dingo
ENSCSEG00000001452	drosha	88	80.000	ENSCHIG00000022226	DROSHA	86	81.180	Capra_hircus
ENSCSEG00000001452	drosha	82	81.326	ENSCPOG00000015051	DROSHA	75	90.412	Cavia_porcellus
ENSCSEG00000001452	drosha	98	72.319	ENSCCAG00000027283	DROSHA	95	90.103	Cebus_capucinus
ENSCSEG00000001452	drosha	88	80.268	ENSCATG00000016833	DROSHA	95	88.866	Cercocebus_atys
ENSCSEG00000001452	drosha	87	80.100	ENSCLAG00000013048	DROSHA	87	81.229	Chinchilla_lanigera
ENSCSEG00000001452	drosha	88	80.351	ENSCSAG00000017202	DROSHA	90	76.997	Chlorocebus_sabaeus
ENSCSEG00000001452	drosha	60	74.528	ENSCHOG00000011786	DROSHA	70	74.528	Choloepus_hoffmanni
ENSCSEG00000001452	drosha	98	74.759	ENSCPBG00000000467	DROSHA	99	74.487	Chrysemys_picta_bellii
ENSCSEG00000001452	drosha	62	58.732	ENSCSAVG00000010638	-	99	59.450	Ciona_savignyi
ENSCSEG00000001452	drosha	87	80.539	ENSCANG00000035071	DROSHA	95	88.866	Colobus_angolensis_palliatus
ENSCSEG00000001452	drosha	87	78.049	ENSCGRG00001008885	Drosha	98	69.822	Cricetulus_griseus_chok1gshd
ENSCSEG00000001452	drosha	87	78.049	ENSCGRG00000006944	Drosha	98	69.822	Cricetulus_griseus_crigri
ENSCSEG00000001452	drosha	99	86.927	ENSCVAG00000004619	drosha	99	86.722	Cyprinodon_variegatus
ENSCSEG00000001452	drosha	86	85.800	ENSDARG00000055563	drosha	88	85.665	Danio_rerio
ENSCSEG00000001452	drosha	77	86.513	ENSDNOG00000001537	DROSHA	77	90.309	Dasypus_novemcinctus
ENSCSEG00000001452	drosha	88	79.866	ENSDORG00000005624	Drosha	86	79.879	Dipodomys_ordii
ENSCSEG00000001452	drosha	91	47.303	FBgn0026722	drosha	72	56.042	Drosophila_melanogaster
ENSCSEG00000001452	drosha	83	91.011	ENSETEG00000007814	DROSHA	81	91.011	Echinops_telfairi
ENSCSEG00000001452	drosha	50	80.910	ENSEBUG00000005974	-	98	81.696	Eptatretus_burgeri
ENSCSEG00000001452	drosha	88	80.518	ENSEASG00005007149	DROSHA	98	73.932	Equus_asinus_asinus
ENSCSEG00000001452	drosha	88	80.518	ENSECAG00000013578	DROSHA	96	73.167	Equus_caballus
ENSCSEG00000001452	drosha	77	82.081	ENSEEUG00000006351	DROSHA	70	85.979	Erinaceus_europaeus
ENSCSEG00000001452	drosha	95	77.206	ENSELUG00000015039	drosha	85	89.384	Esox_lucius
ENSCSEG00000001452	drosha	88	80.435	ENSFCAG00000000360	DROSHA	89	87.216	Felis_catus
ENSCSEG00000001452	drosha	100	72.760	ENSFALG00000012843	DROSHA	85	79.713	Ficedula_albicollis
ENSCSEG00000001452	drosha	98	72.234	ENSFDAG00000018414	DROSHA	86	81.143	Fukomys_damarensis
ENSCSEG00000001452	drosha	88	75.630	ENSFHEG00000003840	drosha	95	74.686	Fundulus_heteroclitus
ENSCSEG00000001452	drosha	100	75.182	ENSGALG00000012916	DROSHA	86	82.302	Gallus_gallus
ENSCSEG00000001452	drosha	84	90.669	ENSGAFG00000016853	drosha	97	84.786	Gambusia_affinis
ENSCSEG00000001452	drosha	98	74.833	ENSGAGG00000005621	DROSHA	99	74.560	Gopherus_agassizii
ENSCSEG00000001452	drosha	88	80.268	ENSGGOG00000011006	DROSHA	95	88.969	Gorilla_gorilla
ENSCSEG00000001452	drosha	96	81.573	ENSHBUG00000015907	drosha	100	83.333	Haplochromis_burtoni
ENSCSEG00000001452	drosha	87	80.537	ENSHGLG00000018873	DROSHA	85	81.143	Heterocephalus_glaber_female
ENSCSEG00000001452	drosha	87	80.537	ENSHGLG00100015793	DROSHA	84	81.143	Heterocephalus_glaber_male
ENSCSEG00000001452	drosha	86	85.874	ENSHCOG00000008454	drosha	97	86.305	Hippocampus_comes
ENSCSEG00000001452	drosha	85	84.562	ENSIPUG00000021202	drosha	99	77.441	Ictalurus_punctatus
ENSCSEG00000001452	drosha	72	87.615	ENSSTOG00000016323	DROSHA	100	94.640	Ictidomys_tridecemlineatus
ENSCSEG00000001452	drosha	98	71.922	ENSJJAG00000019758	Drosha	77	87.113	Jaculus_jaculus
ENSCSEG00000001452	drosha	99	83.104	ENSLBEG00000006606	drosha	100	83.028	Labrus_bergylta
ENSCSEG00000001452	drosha	99	76.044	ENSLACG00000005937	DROSHA	98	76.021	Latimeria_chalumnae
ENSCSEG00000001452	drosha	96	89.652	ENSLOCG00000012852	drosha	89	89.652	Lepisosteus_oculatus
ENSCSEG00000001452	drosha	88	83.592	ENSLAFG00000013831	DROSHA	86	87.113	Loxodonta_africana
ENSCSEG00000001452	drosha	88	80.351	ENSMFAG00000003055	DROSHA	89	85.773	Macaca_fascicularis
ENSCSEG00000001452	drosha	88	80.184	ENSMMUG00000012193	DROSHA	95	90.309	Macaca_mulatta
ENSCSEG00000001452	drosha	88	80.351	ENSMNEG00000037529	DROSHA	98	71.935	Macaca_nemestrina
ENSCSEG00000001452	drosha	88	74.916	ENSMLEG00000024167	DROSHA	90	83.608	Mandrillus_leucophaeus
ENSCSEG00000001452	drosha	100	87.151	ENSMAMG00000012613	drosha	95	93.711	Mastacembelus_armatus
ENSCSEG00000001452	drosha	100	86.437	ENSMZEG00005019487	drosha	100	86.364	Maylandia_zebra
ENSCSEG00000001452	drosha	96	86.957	ENSMGAG00000005087	DROSHA	86	82.045	Meleagris_gallopavo
ENSCSEG00000001452	drosha	87	78.130	ENSMAUG00000002863	Drosha	89	87.216	Mesocricetus_auratus
ENSCSEG00000001452	drosha	88	79.035	ENSMICG00000002241	DROSHA	95	85.831	Microcebus_murinus
ENSCSEG00000001452	drosha	98	69.432	ENSMOCG00000015044	Drosha	77	87.216	Microtus_ochrogaster
ENSCSEG00000001452	drosha	72	91.237	ENSMMOG00000004016	drosha	95	91.237	Mola_mola
ENSCSEG00000001452	drosha	98	73.696	ENSMODG00000004807	DROSHA	98	72.885	Monodelphis_domestica
ENSCSEG00000001452	drosha	100	87.620	ENSMALG00000010542	drosha	100	87.178	Monopterus_albus
ENSCSEG00000001452	drosha	87	77.904	MGP_CAROLIEiJ_G0019687	Drosha	95	90.206	Mus_caroli
ENSCSEG00000001452	drosha	87	77.904	ENSMUSG00000022191	Drosha	89	87.113	Mus_musculus
ENSCSEG00000001452	drosha	87	77.579	MGP_PahariEiJ_G0016063	Drosha	93	91.043	Mus_pahari
ENSCSEG00000001452	drosha	87	77.985	MGP_SPRETEiJ_G0020580	Drosha	95	90.309	Mus_spretus
ENSCSEG00000001452	drosha	88	77.778	ENSMPUG00000015237	DROSHA	89	87.320	Mustela_putorius_furo
ENSCSEG00000001452	drosha	98	82.782	ENSMLUG00000002581	DROSHA	89	86.186	Myotis_lucifugus
ENSCSEG00000001452	drosha	87	72.213	ENSNGAG00000017329	Drosha	76	80.928	Nannospalax_galili
ENSCSEG00000001452	drosha	75	76.098	ENSNBRG00000001870	drosha	99	76.337	Neolamprologus_brichardi
ENSCSEG00000001452	drosha	88	77.697	ENSNLEG00000013963	DROSHA	95	88.866	Nomascus_leucogenys
ENSCSEG00000001452	drosha	67	73.643	ENSMEUG00000002029	DROSHA	68	73.976	Notamacropus_eugenii
ENSCSEG00000001452	drosha	88	85.086	ENSOPRG00000010845	DROSHA	72	85.086	Ochotona_princeps
ENSCSEG00000001452	drosha	98	72.491	ENSODEG00000001911	DROSHA	77	87.010	Octodon_degus
ENSCSEG00000001452	drosha	99	87.666	ENSONIG00000006578	drosha	99	83.369	Oreochromis_niloticus
ENSCSEG00000001452	drosha	57	75.990	ENSOANG00000015744	-	100	75.990	Ornithorhynchus_anatinus
ENSCSEG00000001452	drosha	87	80.688	ENSOCUG00000000367	DROSHA	85	81.074	Oryctolagus_cuniculus
ENSCSEG00000001452	drosha	100	83.358	ENSORLG00000013592	drosha	100	83.358	Oryzias_latipes
ENSCSEG00000001452	drosha	72	93.047	ENSORLG00020002854	drosha	95	93.402	Oryzias_latipes_hni
ENSCSEG00000001452	drosha	72	94.070	ENSORLG00015003156	drosha	95	94.433	Oryzias_latipes_hsok
ENSCSEG00000001452	drosha	100	83.876	ENSOMEG00000001062	drosha	100	84.024	Oryzias_melastigma
ENSCSEG00000001452	drosha	88	76.094	ENSOGAG00000005424	DROSHA	79	88.363	Otolemur_garnettii
ENSCSEG00000001452	drosha	88	80.268	ENSPPAG00000037526	DROSHA	95	87.629	Pan_paniscus
ENSCSEG00000001452	drosha	88	80.435	ENSPPRG00000002687	DROSHA	89	87.216	Panthera_pardus
ENSCSEG00000001452	drosha	88	80.435	ENSPTIG00000017523	DROSHA	89	87.216	Panthera_tigris_altaica
ENSCSEG00000001452	drosha	88	80.268	ENSPTRG00000016762	DROSHA	88	85.773	Pan_troglodytes
ENSCSEG00000001452	drosha	88	80.351	ENSPANG00000003027	DROSHA	89	85.773	Papio_anubis
ENSCSEG00000001452	drosha	86	86.684	ENSPKIG00000011514	drosha	91	91.284	Paramormyrops_kingsleyae
ENSCSEG00000001452	drosha	98	74.650	ENSPEMG00000000607	Drosha	89	87.113	Peromyscus_maniculatus_bairdii
ENSCSEG00000001452	drosha	98	75.000	ENSPCIG00000006010	DROSHA	85	88.417	Phascolarctos_cinereus
ENSCSEG00000001452	drosha	84	91.461	ENSPREG00000022302	drosha	99	85.015	Poecilia_reticulata
ENSCSEG00000001452	drosha	88	77.778	ENSPPYG00000015370	DROSHA	77	87.216	Pongo_abelii
ENSCSEG00000001452	drosha	88	62.825	ENSPCAG00000007190	DROSHA	89	68.144	Procavia_capensis
ENSCSEG00000001452	drosha	88	77.341	ENSPCOG00000028511	DROSHA	94	86.495	Propithecus_coquereli
ENSCSEG00000001452	drosha	88	73.723	ENSPVAG00000013167	DROSHA	71	85.155	Pteropus_vampyrus
ENSCSEG00000001452	drosha	100	86.290	ENSPNYG00000000398	drosha	95	93.299	Pundamilia_nyererei
ENSCSEG00000001452	drosha	79	94.623	ENSPNAG00000011876	drosha	93	91.635	Pygocentrus_nattereri
ENSCSEG00000001452	drosha	87	77.904	ENSRNOG00000013451	Drosha	77	87.320	Rattus_norvegicus
ENSCSEG00000001452	drosha	88	79.031	ENSRBIG00000032786	DROSHA	94	86.495	Rhinopithecus_bieti
ENSCSEG00000001452	drosha	88	80.351	ENSRROG00000028199	DROSHA	97	73.859	Rhinopithecus_roxellana
ENSCSEG00000001452	drosha	88	80.387	ENSSBOG00000024008	DROSHA	95	88.454	Saimiri_boliviensis_boliviensis
ENSCSEG00000001452	drosha	98	73.696	ENSSHAG00000015198	DROSHA	93	90.206	Sarcophilus_harrisii
ENSCSEG00000001452	drosha	87	85.495	ENSSFOG00015009776	drosha	98	85.090	Scleropages_formosus
ENSCSEG00000001452	drosha	100	86.413	ENSSMAG00000008069	drosha	100	86.560	Scophthalmus_maximus
ENSCSEG00000001452	drosha	100	88.343	ENSSDUG00000010944	drosha	95	96.598	Seriola_dumerili
ENSCSEG00000001452	drosha	100	87.959	ENSSLDG00000025271	drosha	95	96.495	Seriola_lalandi_dorsalis
ENSCSEG00000001452	drosha	71	68.478	ENSSARG00000004436	-	65	80.921	Sorex_araneus
ENSCSEG00000001452	drosha	98	70.923	ENSSPUG00000006902	DROSHA	87	76.287	Sphenodon_punctatus
ENSCSEG00000001452	drosha	85	82.307	ENSSSCG00000016809	DROSHA	92	87.594	Sus_scrofa
ENSCSEG00000001452	drosha	100	70.621	ENSTGUG00000001955	DROSHA	86	78.757	Taeniopygia_guttata
ENSCSEG00000001452	drosha	93	82.767	ENSTRUG00000017778	drosha	97	83.004	Takifugu_rubripes
ENSCSEG00000001452	drosha	100	81.910	ENSTNIG00000008688	drosha	99	94.456	Tetraodon_nigroviridis
ENSCSEG00000001452	drosha	74	78.492	ENSTBEG00000000537	DROSHA	76	81.553	Tupaia_belangeri
ENSCSEG00000001452	drosha	86	83.771	ENSTTRG00000004210	DROSHA	71	90.206	Tursiops_truncatus
ENSCSEG00000001452	drosha	88	80.351	ENSUAMG00000025257	DROSHA	98	73.711	Ursus_americanus
ENSCSEG00000001452	drosha	87	79.967	ENSUMAG00000014097	DROSHA	95	94.006	Ursus_maritimus
ENSCSEG00000001452	drosha	80	76.670	ENSVPAG00000011260	DROSHA	88	84.433	Vicugna_pacos
ENSCSEG00000001452	drosha	88	80.435	ENSVVUG00000022212	DROSHA	99	93.878	Vulpes_vulpes
ENSCSEG00000001452	drosha	81	83.093	ENSXETG00000016701	drosha	85	76.661	Xenopus_tropicalis