EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001458 (Gene tree)
Gene ID: 103390461
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: histone-lysine N-methyltransferase SETD1B-A
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 18312 bases
Position: chr14:28269256-28287567
Accession: 103390461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000002157	RRM_1	PF00076.22	1.2e-08	1	1
ENSCSEP00000002163	RRM_1	PF00076.22	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000002195	-	9494	XM_025062721	ENSCSEP00000002157	1790 (aa)	XP_024918489	-
ENSCSET00000002201	-	9440	XM_008326326	ENSCSEP00000002163	1815 (aa)	XP_008324548	UPI0007DCB12C

Gene Model

Click here to download ENSCSEG00000001458's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001458	setd1ba	100	80.358	ENSAPOG00000014731	setd1ba	55	84.980	Acanthochromis_polyacanthus
ENSCSEG00000001458	setd1ba	100	72.459	ENSACIG00000016453	setd1ba	100	72.414	Amphilophus_citrinellus
ENSCSEG00000001458	setd1ba	97	80.056	ENSAOCG00000012148	setd1ba	57	85.277	Amphiprion_ocellaris
ENSCSEG00000001458	setd1ba	100	78.740	ENSAPEG00000010762	setd1ba	55	82.540	Amphiprion_percula
ENSCSEG00000001458	setd1ba	92	82.451	ENSATEG00000021563	setd1ba	98	81.543	Anabas_testudineus
ENSCSEG00000001458	setd1ba	55	80.887	ENSACLG00000016584	setd1ba	100	77.433	Astatotilapia_calliptera
ENSCSEG00000001458	setd1ba	50	72.136	ENSCHIG00000013406	SETD1B	87	53.150	Capra_hircus
ENSCSEG00000001458	setd1ba	64	67.925	ENSCANG00000023445	SETD1B	79	67.925	Colobus_angolensis_palliatus
ENSCSEG00000001458	setd1ba	55	76.653	ENSCVAG00000022068	setd1ba	55	76.453	Cyprinodon_variegatus
ENSCSEG00000001458	setd1ba	84	73.826	ENSELUG00000022712	-	88	45.194	Esox_lucius
ENSCSEG00000001458	setd1ba	53	89.841	ENSGMOG00000009831	setd1ba	59	89.841	Gadus_morhua
ENSCSEG00000001458	setd1ba	88	79.770	ENSGAFG00000008712	setd1ba	88	79.500	Gambusia_affinis
ENSCSEG00000001458	setd1ba	56	76.304	ENSGACG00000017002	setd1ba	95	76.602	Gasterosteus_aculeatus
ENSCSEG00000001458	setd1ba	55	80.887	ENSHBUG00000019992	setd1ba	100	77.354	Haplochromis_burtoni
ENSCSEG00000001458	setd1ba	50	80.675	ENSSTOG00000012430	SETD1B	84	56.391	Ictidomys_tridecemlineatus
ENSCSEG00000001458	setd1ba	54	76.697	ENSKMAG00000007804	setd1ba	54	75.397	Kryptolebias_marmoratus
ENSCSEG00000001458	setd1ba	100	73.880	ENSLBEG00000020113	setd1ba	95	78.842	Labrus_bergylta
ENSCSEG00000001458	setd1ba	100	81.216	ENSMAMG00000011027	setd1ba	55	84.768	Mastacembelus_armatus
ENSCSEG00000001458	setd1ba	55	80.887	ENSMZEG00005026617	setd1ba	100	77.433	Maylandia_zebra
ENSCSEG00000001458	setd1ba	100	77.040	ENSMMOG00000008190	setd1ba	55	82.604	Mola_mola
ENSCSEG00000001458	setd1ba	100	79.575	ENSMALG00000005362	setd1ba	55	84.387	Monopterus_albus
ENSCSEG00000001458	setd1ba	100	76.390	ENSNBRG00000002915	setd1ba	99	76.718	Neolamprologus_brichardi
ENSCSEG00000001458	setd1ba	55	80.788	ENSONIG00000013898	setd1ba	99	77.241	Oreochromis_niloticus
ENSCSEG00000001458	setd1ba	66	72.116	ENSORLG00015004156	setd1ba	80	79.032	Oryzias_latipes_hsok
ENSCSEG00000001458	setd1ba	100	73.293	ENSOMEG00000002270	setd1ba	55	78.557	Oryzias_melastigma
ENSCSEG00000001458	setd1ba	89	78.982	ENSPMGG00000011527	setd1ba	91	78.818	Periophthalmus_magnuspinnatus
ENSCSEG00000001458	setd1ba	100	74.660	ENSPFOG00000019768	setd1ba	53	79.145	Poecilia_formosa
ENSCSEG00000001458	setd1ba	100	76.172	ENSPNYG00000009484	setd1ba	55	81.379	Pundamilia_nyererei
ENSCSEG00000001458	setd1ba	53	73.006	ENSRNOG00000001337	Setd1b	67	73.065	Rattus_norvegicus
ENSCSEG00000001458	setd1ba	79	69.945	ENSSFOG00015004814	SETD1B	91	72.877	Scleropages_formosus
ENSCSEG00000001458	setd1ba	55	86.759	ENSSLDG00000015543	setd1ba	99	81.527	Seriola_lalandi_dorsalis
ENSCSEG00000001458	setd1ba	100	80.721	ENSSPAG00000015470	setd1ba	100	80.601	Stegastes_partitus
ENSCSEG00000001458	setd1ba	67	80.308	ENSUAMG00000008729	SETD1B	52	80.308	Ursus_americanus
ENSCSEG00000001458	setd1ba	55	77.143	ENSXCOG00000004451	setd1ba	97	72.582	Xiphophorus_couchianus