EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001565 (Gene tree)
Gene ID: 103389302
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5458 bases
Position: chr14:5527409-5532866
Accession: 103389302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000002333	CPL	PF08144.11	1.4e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000002373	-	2669	XM_017038329	ENSCSEP00000002333	578 (aa)	XP_024917725	UPI000D62DDC5

Gene Model

Click here to download ENSCSEG00000001565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001565	pum3	99	56.164	ENSG00000080608	PUM3	89	56.507	Homo_sapiens
ENSCSEG00000001565	pum3	99	77.320	ENSAPOG00000020252	pum3	89	77.663	Acanthochromis_polyacanthus
ENSCSEG00000001565	pum3	97	58.217	ENSAMEG00000012187	PUM3	89	58.048	Ailuropoda_melanoleuca
ENSCSEG00000001565	pum3	83	76.091	ENSACIG00000009786	pum3	80	76.091	Amphilophus_citrinellus
ENSCSEG00000001565	pum3	99	78.007	ENSAOCG00000004439	pum3	89	78.351	Amphiprion_ocellaris
ENSCSEG00000001565	pum3	99	78.007	ENSAPEG00000020523	pum3	89	78.351	Amphiprion_percula
ENSCSEG00000001565	pum3	99	77.951	ENSATEG00000005799	pum3	88	78.646	Anabas_testudineus
ENSCSEG00000001565	pum3	98	56.591	ENSAPLG00000002920	PUM3	86	58.614	Anas_platyrhynchos
ENSCSEG00000001565	pum3	99	55.536	ENSACAG00000003174	PUM3	86	58.984	Anolis_carolinensis
ENSCSEG00000001565	pum3	99	57.143	ENSANAG00000024520	PUM3	89	57.290	Aotus_nancymaae
ENSCSEG00000001565	pum3	99	74.150	ENSACLG00000001017	pum3	89	74.150	Astatotilapia_calliptera
ENSCSEG00000001565	pum3	99	63.339	ENSAMXG00000020911	pum3	89	62.349	Astyanax_mexicanus
ENSCSEG00000001565	pum3	97	57.821	ENSBTAG00000013357	PUM3	89	57.118	Bos_taurus
ENSCSEG00000001565	pum3	99	56.678	ENSCJAG00000010917	PUM3	89	57.021	Callithrix_jacchus
ENSCSEG00000001565	pum3	97	57.895	ENSCAFG00000002035	PUM3	89	57.633	Canis_familiaris
ENSCSEG00000001565	pum3	97	57.895	ENSCAFG00020026867	PUM3	89	57.633	Canis_lupus_dingo
ENSCSEG00000001565	pum3	97	58.524	ENSCHIG00000021559	PUM3	89	57.633	Capra_hircus
ENSCSEG00000001565	pum3	99	56.102	ENSTSYG00000007481	PUM3	89	56.239	Carlito_syrichta
ENSCSEG00000001565	pum3	97	56.766	ENSCAPG00000010592	-	79	60.078	Cavia_aperea
ENSCSEG00000001565	pum3	97	56.591	ENSCPOG00000008552	-	78	59.496	Cavia_porcellus
ENSCSEG00000001565	pum3	99	56.271	ENSCCAG00000032650	PUM3	89	56.581	Cebus_capucinus
ENSCSEG00000001565	pum3	99	57.313	ENSCATG00000024880	PUM3	89	57.021	Cercocebus_atys
ENSCSEG00000001565	pum3	99	56.463	ENSCLAG00000011892	PUM3	89	56.432	Chinchilla_lanigera
ENSCSEG00000001565	pum3	99	56.973	ENSCSAG00000008691	PUM3	89	57.021	Chlorocebus_sabaeus
ENSCSEG00000001565	pum3	60	60.057	ENSCHOG00000002535	PUM3	51	60.057	Choloepus_hoffmanni
ENSCSEG00000001565	pum3	99	57.366	ENSCPBG00000025470	PUM3	76	60.735	Chrysemys_picta_bellii
ENSCSEG00000001565	pum3	91	37.570	ENSCING00000024199	-	93	37.570	Ciona_intestinalis
ENSCSEG00000001565	pum3	74	40.553	ENSCSAVG00000006072	-	82	39.862	Ciona_savignyi
ENSCSEG00000001565	pum3	99	56.507	ENSCANG00000006142	PUM3	89	56.849	Colobus_angolensis_palliatus
ENSCSEG00000001565	pum3	99	56.432	ENSCGRG00001016402	Pum3	89	56.604	Cricetulus_griseus_chok1gshd
ENSCSEG00000001565	pum3	99	56.432	ENSCGRG00000010207	Pum3	89	56.604	Cricetulus_griseus_crigri
ENSCSEG00000001565	pum3	64	69.849	ENSCVAG00000006550	pum3	87	69.849	Cyprinodon_variegatus
ENSCSEG00000001565	pum3	99	63.167	ENSDARG00000087779	pum3	93	61.921	Danio_rerio
ENSCSEG00000001565	pum3	99	48.639	ENSDNOG00000008157	PUM3	61	49.488	Dasypus_novemcinctus
ENSCSEG00000001565	pum3	79	63.736	ENSETEG00000015331	PUM3	71	63.499	Echinops_telfairi
ENSCSEG00000001565	pum3	78	40.173	ENSEBUG00000011586	pum3	72	39.583	Eptatretus_burgeri
ENSCSEG00000001565	pum3	97	58.070	ENSEASG00005010350	PUM3	89	57.877	Equus_asinus_asinus
ENSCSEG00000001565	pum3	97	58.172	ENSECAG00000017193	PUM3	89	57.877	Equus_caballus
ENSCSEG00000001565	pum3	95	51.184	ENSEEUG00000010314	PUM3	95	50.429	Erinaceus_europaeus
ENSCSEG00000001565	pum3	94	66.788	ENSELUG00000002215	pum3	81	67.108	Esox_lucius
ENSCSEG00000001565	pum3	94	56.560	ENSFALG00000010509	PUM3	77	60.314	Ficedula_albicollis
ENSCSEG00000001565	pum3	99	56.633	ENSFDAG00000021027	PUM3	89	56.947	Fukomys_damarensis
ENSCSEG00000001565	pum3	94	74.757	ENSFHEG00000015576	pum3	86	74.757	Fundulus_heteroclitus
ENSCSEG00000001565	pum3	80	71.121	ENSGMOG00000014217	pum3	86	71.429	Gadus_morhua
ENSCSEG00000001565	pum3	79	63.736	ENSGALG00000010178	PUM3	72	63.499	Gallus_gallus
ENSCSEG00000001565	pum3	52	72.241	ENSGAFG00000001930	pum3	51	75.088	Gambusia_affinis
ENSCSEG00000001565	pum3	82	81.568	ENSGACG00000017878	pum3	86	81.568	Gasterosteus_aculeatus
ENSCSEG00000001565	pum3	99	57.417	ENSGAGG00000018983	PUM3	84	59.538	Gopherus_agassizii
ENSCSEG00000001565	pum3	99	56.336	ENSGGOG00000006143	PUM3	89	56.678	Gorilla_gorilla
ENSCSEG00000001565	pum3	99	60.702	ENSHBUG00000012903	pum3	88	61.713	Haplochromis_burtoni
ENSCSEG00000001565	pum3	99	56.529	ENSHGLG00000015868	-	89	56.873	Heterocephalus_glaber_female
ENSCSEG00000001565	pum3	99	56.529	ENSHGLG00100018825	PUM3	89	56.873	Heterocephalus_glaber_male
ENSCSEG00000001565	pum3	99	69.852	ENSHCOG00000010306	pum3	89	70.909	Hippocampus_comes
ENSCSEG00000001565	pum3	93	63.653	ENSIPUG00000024801	pum3	89	61.538	Ictalurus_punctatus
ENSCSEG00000001565	pum3	99	57.070	ENSSTOG00000009586	PUM3	89	57.021	Ictidomys_tridecemlineatus
ENSCSEG00000001565	pum3	99	55.631	ENSJJAG00000012563	Pum3	88	55.842	Jaculus_jaculus
ENSCSEG00000001565	pum3	99	72.743	ENSKMAG00000010277	pum3	92	74.355	Kryptolebias_marmoratus
ENSCSEG00000001565	pum3	99	77.041	ENSLBEG00000012213	pum3	89	77.381	Labrus_bergylta
ENSCSEG00000001565	pum3	91	58.286	ENSLACG00000008312	PUM3	80	58.700	Latimeria_chalumnae
ENSCSEG00000001565	pum3	99	62.021	ENSLOCG00000012529	pum3	88	61.498	Lepisosteus_oculatus
ENSCSEG00000001565	pum3	98	57.143	ENSLAFG00000017341	PUM3	89	56.559	Loxodonta_africana
ENSCSEG00000001565	pum3	99	57.143	ENSMFAG00000001430	PUM3	89	57.192	Macaca_fascicularis
ENSCSEG00000001565	pum3	99	57.143	ENSMMUG00000002362	PUM3	88	57.192	Macaca_mulatta
ENSCSEG00000001565	pum3	99	57.143	ENSMNEG00000035288	PUM3	89	57.192	Macaca_nemestrina
ENSCSEG00000001565	pum3	99	56.973	ENSMLEG00000034820	PUM3	89	57.021	Mandrillus_leucophaeus
ENSCSEG00000001565	pum3	90	78.212	ENSMAMG00000022861	pum3	89	76.451	Mastacembelus_armatus
ENSCSEG00000001565	pum3	99	74.232	ENSMZEG00005014205	pum3	86	74.232	Maylandia_zebra
ENSCSEG00000001565	pum3	79	59.130	ENSMGAG00000002255	PUM3	88	52.087	Meleagris_gallopavo
ENSCSEG00000001565	pum3	99	56.197	ENSMAUG00000009733	Pum3	89	56.336	Mesocricetus_auratus
ENSCSEG00000001565	pum3	99	55.782	ENSMICG00000045916	PUM3	77	56.164	Microcebus_murinus
ENSCSEG00000001565	pum3	99	56.410	ENSMOCG00000019519	-	78	60.465	Microtus_ochrogaster
ENSCSEG00000001565	pum3	99	55.633	ENSMOCG00000014830	-	88	55.113	Microtus_ochrogaster
ENSCSEG00000001565	pum3	89	75.475	ENSMMOG00000012184	pum3	86	76.040	Mola_mola
ENSCSEG00000001565	pum3	86	60.685	ENSMODG00000015417	PUM3	68	61.290	Monodelphis_domestica
ENSCSEG00000001565	pum3	99	77.381	ENSMALG00000022164	pum3	82	77.381	Monopterus_albus
ENSCSEG00000001565	pum3	99	57.118	MGP_CAROLIEiJ_G0022845	Pum3	89	57.363	Mus_caroli
ENSCSEG00000001565	pum3	99	56.604	ENSMUSG00000041360	Pum3	89	56.849	Mus_musculus
ENSCSEG00000001565	pum3	99	56.604	MGP_PahariEiJ_G0014338	Pum3	89	56.849	Mus_pahari
ENSCSEG00000001565	pum3	99	56.604	MGP_SPRETEiJ_G0023763	Pum3	89	56.849	Mus_spretus
ENSCSEG00000001565	pum3	95	58.545	ENSMPUG00000005125	PUM3	78	60.470	Mustela_putorius_furo
ENSCSEG00000001565	pum3	99	56.803	ENSMLUG00000002309	PUM3	89	56.678	Myotis_lucifugus
ENSCSEG00000001565	pum3	99	54.452	ENSNGAG00000019468	Pum3	89	54.281	Nannospalax_galili
ENSCSEG00000001565	pum3	95	66.785	ENSNBRG00000021370	pum3	84	66.785	Neolamprologus_brichardi
ENSCSEG00000001565	pum3	99	56.610	ENSNLEG00000008712	PUM3	89	56.849	Nomascus_leucogenys
ENSCSEG00000001565	pum3	77	45.964	ENSMEUG00000013606	-	92	45.898	Notamacropus_eugenii
ENSCSEG00000001565	pum3	76	48.409	ENSOPRG00000004225	-	72	46.555	Ochotona_princeps
ENSCSEG00000001565	pum3	99	55.952	ENSODEG00000003625	-	89	56.432	Octodon_degus
ENSCSEG00000001565	pum3	99	51.438	ENSODEG00000016477	-	88	51.448	Octodon_degus
ENSCSEG00000001565	pum3	99	74.915	ENSONIG00000012733	pum3	89	74.915	Oreochromis_niloticus
ENSCSEG00000001565	pum3	79	64.835	ENSOANG00000014995	PUM3	85	64.579	Ornithorhynchus_anatinus
ENSCSEG00000001565	pum3	99	56.581	ENSOCUG00000026104	-	89	56.627	Oryctolagus_cuniculus
ENSCSEG00000001565	pum3	99	56.973	ENSOCUG00000004189	-	89	57.021	Oryctolagus_cuniculus
ENSCSEG00000001565	pum3	99	72.021	ENSORLG00000014935	pum3	89	71.649	Oryzias_latipes
ENSCSEG00000001565	pum3	99	71.675	ENSORLG00020002841	pum3	89	71.306	Oryzias_latipes_hni
ENSCSEG00000001565	pum3	99	71.649	ENSORLG00015015906	pum3	96	70.884	Oryzias_latipes_hsok
ENSCSEG00000001565	pum3	99	69.257	ENSOMEG00000009427	pum3	89	70.619	Oryzias_melastigma
ENSCSEG00000001565	pum3	76	47.416	ENSOGAG00000033481	-	72	46.681	Otolemur_garnettii
ENSCSEG00000001565	pum3	99	57.509	ENSOGAG00000008125	-	89	57.534	Otolemur_garnettii
ENSCSEG00000001565	pum3	97	58.172	ENSOARG00000013337	PUM3	89	57.290	Ovis_aries
ENSCSEG00000001565	pum3	99	56.164	ENSPPAG00000041337	PUM3	89	56.507	Pan_paniscus
ENSCSEG00000001565	pum3	99	57.313	ENSPPRG00000000809	PUM3	89	57.290	Panthera_pardus
ENSCSEG00000001565	pum3	99	57.823	ENSPTIG00000021934	PUM3	89	57.804	Panthera_tigris_altaica
ENSCSEG00000001565	pum3	99	56.336	ENSPTRG00000020735	PUM3	89	56.678	Pan_troglodytes
ENSCSEG00000001565	pum3	99	56.973	ENSPANG00000025118	PUM3	89	57.021	Papio_anubis
ENSCSEG00000001565	pum3	99	62.912	ENSPKIG00000022249	pum3	89	61.780	Paramormyrops_kingsleyae
ENSCSEG00000001565	pum3	99	58.377	ENSPSIG00000016272	PUM3	89	58.304	Pelodiscus_sinensis
ENSCSEG00000001565	pum3	74	80.471	ENSPMGG00000021261	pum3	87	80.998	Periophthalmus_magnuspinnatus
ENSCSEG00000001565	pum3	87	75.000	ENSPEMG00000019340	-	87	75.000	Peromyscus_maniculatus_bairdii
ENSCSEG00000001565	pum3	86	61.290	ENSPCIG00000030598	PUM3	66	61.290	Phascolarctos_cinereus
ENSCSEG00000001565	pum3	99	65.679	ENSPFOG00000001719	pum3	88	65.679	Poecilia_formosa
ENSCSEG00000001565	pum3	99	67.308	ENSPLAG00000020010	pum3	89	67.308	Poecilia_latipinna
ENSCSEG00000001565	pum3	99	66.434	ENSPMEG00000017451	pum3	89	66.434	Poecilia_mexicana
ENSCSEG00000001565	pum3	70	56.835	ENSPREG00000019478	-	74	56.738	Poecilia_reticulata
ENSCSEG00000001565	pum3	99	56.849	ENSPPYG00000019255	PUM3	89	57.192	Pongo_abelii
ENSCSEG00000001565	pum3	99	49.829	ENSPCAG00000005797	PUM3	75	52.907	Procavia_capensis
ENSCSEG00000001565	pum3	99	55.952	ENSPCOG00000027325	PUM3	89	56.336	Propithecus_coquereli
ENSCSEG00000001565	pum3	99	56.633	ENSPVAG00000016135	PUM3	84	56.678	Pteropus_vampyrus
ENSCSEG00000001565	pum3	99	74.276	ENSPNYG00000016124	pum3	89	74.276	Pundamilia_nyererei
ENSCSEG00000001565	pum3	99	61.938	ENSPNAG00000026524	pum3	89	61.897	Pygocentrus_nattereri
ENSCSEG00000001565	pum3	99	56.507	ENSRNOG00000048356	RGD1308750	78	60.271	Rattus_norvegicus
ENSCSEG00000001565	pum3	99	57.094	ENSRNOG00000012574	Pum3	89	57.021	Rattus_norvegicus
ENSCSEG00000001565	pum3	99	56.507	ENSRBIG00000036924	PUM3	89	56.678	Rhinopithecus_bieti
ENSCSEG00000001565	pum3	99	56.507	ENSRROG00000041089	PUM3	89	56.678	Rhinopithecus_roxellana
ENSCSEG00000001565	pum3	99	56.849	ENSSBOG00000028066	PUM3	89	57.192	Saimiri_boliviensis_boliviensis
ENSCSEG00000001565	pum3	99	57.119	ENSSHAG00000003730	PUM3	89	55.574	Sarcophilus_harrisii
ENSCSEG00000001565	pum3	97	61.962	ENSSFOG00015018778	pum3	86	62.382	Scleropages_formosus
ENSCSEG00000001565	pum3	99	74.746	ENSSMAG00000013236	pum3	89	78.120	Scophthalmus_maximus
ENSCSEG00000001565	pum3	99	79.865	ENSSDUG00000001887	pum3	89	80.541	Seriola_dumerili
ENSCSEG00000001565	pum3	99	80.409	ENSSLDG00000015766	pum3	89	80.750	Seriola_lalandi_dorsalis
ENSCSEG00000001565	pum3	92	55.932	ENSSARG00000000579	PUM3	80	56.944	Sorex_araneus
ENSCSEG00000001565	pum3	93	58.955	ENSSPUG00000001707	PUM3	88	55.786	Sphenodon_punctatus
ENSCSEG00000001565	pum3	99	77.453	ENSSPAG00000003976	pum3	89	77.797	Stegastes_partitus
ENSCSEG00000001565	pum3	97	57.544	ENSSSCG00000005227	PUM3	99	56.137	Sus_scrofa
ENSCSEG00000001565	pum3	93	56.937	ENSTGUG00000005339	PUM3	78	61.297	Taeniopygia_guttata
ENSCSEG00000001565	pum3	99	74.619	ENSTRUG00000004074	pum3	88	74.619	Takifugu_rubripes
ENSCSEG00000001565	pum3	99	73.077	ENSTNIG00000010325	pum3	87	71.902	Tetraodon_nigroviridis
ENSCSEG00000001565	pum3	79	45.614	ENSTBEG00000013058	PUM3	71	45.690	Tupaia_belangeri
ENSCSEG00000001565	pum3	97	52.724	ENSTTRG00000001062	PUM3	85	51.973	Tursiops_truncatus
ENSCSEG00000001565	pum3	97	52.098	ENSUMAG00000018443	PUM3	85	60.131	Ursus_maritimus
ENSCSEG00000001565	pum3	99	56.706	ENSVPAG00000010766	PUM3	88	56.678	Vicugna_pacos
ENSCSEG00000001565	pum3	97	57.895	ENSVVUG00000006527	PUM3	89	57.633	Vulpes_vulpes
ENSCSEG00000001565	pum3	95	50.912	ENSXETG00000011707	pum3	78	53.502	Xenopus_tropicalis
ENSCSEG00000001565	pum3	92	65.725	ENSXCOG00000006725	pum3	87	65.524	Xiphophorus_couchianus
ENSCSEG00000001565	pum3	99	65.734	ENSXMAG00000002926	pum3	89	65.734	Xiphophorus_maculatus